Related to issue #87.

Noticed that the Vocabulary has deprecated relationships now when using MeSH --> RxNorm. Removed deprecated relationships.
OHDSI · Aug 10, 2016 · b5766a2 · b5766a2
1 parent 7c324a4
commit b5766a2
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/LAERTES/terminology-mappings/RxNorm-to-MeSH/README b/LAERTES/terminology-mappings/RxNorm-to-MeSH/README
@@ -10,7 +10,8 @@ WHERE A.VOCABULARY_ID = 'MeSH' AND
       CR.CONCEPT_ID_2 = A.CONCEPT_ID AND
       B.CONCEPT_ID = CR.CONCEPT_ID_1 AND
       B.VOCABULARY_ID = 'RxNorm' AND
-      CR.RELATIONSHIP_ID = 'Mapped from')
+      CR.RELATIONSHIP_ID = 'Mapped from' AND 
+	  CR.INVALID_REASON IS NULL)
 TO '/tmp/mesh-to-rxnorm-standard-vocab-v5.csv' DELIMITER '|' CSV HEADER
 
 The format is as follows: