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update to ctsm5.3.011 #97

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merged 219 commits into from
Nov 19, 2024

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Description of changes

Update noresm brach to escomp ctsm5.3.011

Specific notes

This is needed as a first step for reviewing PR #96.

johnpaulalex and others added 30 commits June 21, 2023 11:16
FATES API update to facilitate fates refactor

This updates a number of FATES type names and module use statements
which correspond with a refactoring effort that moves FATES
patches and cohorts into their own respective modules.

With the FATES update is a minor science update, so there are
changes to answers for FATES.

This also incorporates a minor update to a more recent version
of the ccs config external.
Bring b4b-dev branch to main CTSM development.

- PLUMBER2 for ctsm5.2 datasets
- Last bit of PPE changes for namelist and parameter file settings
- Update run_sys_tests on Derecho for compiler jobs to run using 16 tasks
- Bring in a fix for dust emissions for coupling with CAM

Update cs.status parsing script to make expected BASELINE fails more obvious

Fix some issues with finding IC files for certain lnd_tuning_modes: all for cam7,
   clm5_0_cam6.0, and clm6_0_cam6.0
hs-uii: Merge in latest b4b-dev
Add a namelist warning when hillslope hydrology is used with initial interpolation.
Fix comments on urban thermal variables (no testing done)
Also makes it accessible from table of contents. Not actually changing file contents at this point.
* The experience of making a mesh from an input with 1d vs. 2d coordinates is identical, so only provide one example.
* In example, use as input file the 5x5_amazon surface dataset included with CTSM.
* Various wording and typo fixes.
slevis-lmwg and others added 21 commits October 30, 2024 10:47
Remove/replace refs to DATM_C*_YR_* variables
Document that fincl1 maps to 'h0' history file. And fexcl1
Currently fails. We want FATES to work and BGC to fail, even when ignoring warnings.
Resolves ESCOMP#2856, where such runs were getting their finidat overwritten with ' '.
Previously, this only produced a warning, which could be overridden.
Fix handling of finidat with cold starts
@mvertens mvertens requested a review from mvdebolskiy November 17, 2024 10:19
@mvertens mvertens self-assigned this Nov 17, 2024
@mvertens mvertens merged commit 95a4d93 into NorESMhub:noresm Nov 19, 2024
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