Skip to content
@MontpellierRessourcesImagerie

Montpellier Ressources Imagerie

Popular repositories Loading

  1. imagej_macros_and_scripts imagej_macros_and_scripts Public

    ImageJ macros and scripts written at the imaging facility MRI

    Jupyter Notebook 32 16

  2. MetroloJ_QC MetroloJ_QC Public

    Java 12 1

  3. mri-workshop-machine-learning mri-workshop-machine-learning Public

    The MRI machine learning workshop

    Jupyter Notebook 3 1

  4. image-analysis-notebooks image-analysis-notebooks Public

    Jupyter Notebook 3

  5. napari-bigfish napari-bigfish Public

    A napari-plugin providing an alternative GUI for Big-FISH. Big-FISH is a python package for the analysis of smFISH images

    Python 3 1

  6. napari-J napari-J Public

    Connect Napari with FIJI/ImageJ

    Python 2 2

Repositories

Showing 10 of 69 repositories
  • qupath_multiplex_analysis Public

    Tools to facilitate multiplex image analysis with QuPath

    MontpellierRessourcesImagerie/qupath_multiplex_analysis’s past year of commit activity
    Groovy 0 MIT 0 0 0 Updated Dec 3, 2024
  • imagej_macros_and_scripts Public

    ImageJ macros and scripts written at the imaging facility MRI

    MontpellierRessourcesImagerie/imagej_macros_and_scripts’s past year of commit activity
    Jupyter Notebook 32 MIT 16 5 0 Updated Dec 3, 2024
  • microglia-analyzer Public

    A Napari plugin meant to detect and segment microglia before extracting some measures about them.

    MontpellierRessourcesImagerie/microglia-analyzer’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Nov 29, 2024
  • segment-embryo Public

    Segment the cells of an ascidian embryon, detect the stained mRNA molecules per cell and analyze their distribution

    MontpellierRessourcesImagerie/segment-embryo’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Nov 27, 2024
  • spots-in-yeasts Public

    Napari plugin producing a segmentation of yeast cells according to their transmission channel, and detecting YFP spots in the fluo channel.

    MontpellierRessourcesImagerie/spots-in-yeasts’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Nov 27, 2024
  • MontpellierRessourcesImagerie/microscope-metrics’s past year of commit activity
    Python 0 MIT 6 13 4 Updated Nov 26, 2024
  • OMERO-metrics Public

    OMERO-metrics is an omero web app to analyze and visualize microscope metrology data

    MontpellierRessourcesImagerie/OMERO-metrics’s past year of commit activity
    Python 0 AGPL-3.0 3 0 0 Updated Nov 26, 2024
  • mri-cia-documents Public

    Public documents related to the MRI-CIA service.

    MontpellierRessourcesImagerie/mri-cia-documents’s past year of commit activity
    0 0 0 0 Updated Nov 20, 2024
  • MontpellierRessourcesImagerie/microscopemetrics-schema’s past year of commit activity
    Python 0 GPL-3.0 2 0 0 Updated Nov 14, 2024
  • MontpellierRessourcesImagerie/presentations’s past year of commit activity
    HTML 0 0 0 0 Updated Nov 12, 2024