add sample to match_on option in op.switch_on_column

LCR-BCCRC · Jul 7, 2020 · 7a34b04 · 7a34b04
1 parent 2c251b5
commit 7a34b04
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/oncopipe/oncopipe/__init__.py b/oncopipe/oncopipe/__init__.py
@@ -420,6 +420,8 @@ def _switch_on_column(
             sample_id = wildcards.tumour_id
         elif match_on == "normal":
             sample_id = wildcards.normal_id
+        elif match_on == "sample":
+            sample_id = wildcards.sample_id
         else:
             raise ValueError("Invalid value for `match_on`.")
         subset = samples.loc[samples["seq_type"] == wildcards.seq_type]