Use NiftiImage in Content classes #131
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| name: Coverage | |
| on: [push, pull_request] | |
| jobs: | |
| Coverage: | |
| runs-on: [self-hosted, ubuntu-22.04, gpu] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Install dependencies | |
| run: sudo apt-get update && sudo apt-get install -y cmake git lcov | |
| - name: Install Catch2 | |
| run: | | |
| git clone https://github.com/catchorg/Catch2.git | |
| cd Catch2 | |
| cmake -Bbuild -H. -DBUILD_TESTING=OFF | |
| sudo cmake --build build/ --target install --config Debug | |
| - name: Configure NiftyReg | |
| run: | | |
| mkdir build | |
| cd build | |
| cmake -DCMAKE_C_COMPILER=gcc \ | |
| -DCMAKE_CXX_COMPILER=g++ \ | |
| -DCMAKE_BUILD_TYPE=Debug \ | |
| -DBUILD_ALL_DEP=ON \ | |
| -DUSE_CUDA=ON \ | |
| -DUSE_OPENCL=OFF \ | |
| -DUSE_SSE=OFF \ | |
| -DUSE_OPENMP=OFF \ | |
| -DBUILD_TESTING=ON \ | |
| -DWITH_COVERAGE=ON \ | |
| .. | |
| - name: Build NiftyReg | |
| run: cmake --build build --config Debug | |
| - name: Run tests | |
| working-directory: build | |
| run: ctest -V | |
| - name: Coverage | |
| working-directory: build | |
| run: make coverage | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v3 | |
| with: | |
| directory: build | |
| env: | |
| CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} |