Merge pull request #226 from InnopolisUni/stratify

Stratify

config/datasets/classification/classification_mnist.yaml

@@ -20,3 +20,5 @@ test:
 infer:
   source: https://api.blackhole.ai.innopolis.university/public-datasets/mnist/infer.zip
   target: ./data/mnist/infer
+
+stratify: True

config/experiments/empty_template.yaml

@@ -0,0 +1,17 @@
+# @package _global_
+defaults:
+  - override /models:
+  - override /datasets:
+  - override /optimizers:
+  - override /augmentations_train:
+  - override /augmentations_val:
+  - override /augmentations_test:
+  - override /losses:
+
+project:
+task:
+random_seed:
+stop_param:
+epochs:
+weights_freq:
+batch_size:

config/experiments/example_image_classification_resnet.yaml

@@ -0,0 +1,20 @@
+# @package _global_
+defaults:
+  - override /models: classification/resnet.yaml
+  - override /datasets: classification/classification_mnist.yaml
+  - override /augmentations_train: none #classification.yaml
+  - override /augmentations_val: none
+  - override /augmentations_test: none
+  - override /losses: log_loss.yaml
+  - override /optimizers: adam
+  - override /schedulers:
+
+project: "mnist_classification"
+task: "image-classification"
+random_seed: 42
+batch_size: 128
+epochs: 5
+accelerator: "gpu"
+devices: 2
+num_workers: 1
+weights_freq: 7

config/experiments/example_image_detection_yolo.yaml

@@ -0,0 +1,10 @@
+# @package _global_
+batch_size: 2
+defaults:
+- override /models: detection/yolov5
+- override /datasets: detection/detection_rotten_fruits
+epochs: 3
+project: rotten_fruits
+random_seed: 43
+task: image-detection
+weights_freq: 1

config/experiments/example_image_segmentation_unet.yaml

@@ -0,0 +1,17 @@
+# @package _global_
+defaults:
+  - override /models: semantic-segmentation/unet
+  - override /datasets: semantic-segmentation/segmentation_brain.yaml
+  - override /augmentations_train: none #segmentation_stroke.yaml
+  - override /augmentations_val: none
+  - override /augmentations_test: none
+  - override /losses: segmentation_losses.yaml
+models:
+  in_channels: 1
+project: "segmentation"
+task: "image-segmentation-complexing"
+random_seed: 42
+stop_param: 10
+epochs: 300
+weights_freq: 1
+batch_size: 10

config/experiments/example_table_classification_sklearn.yaml

@@ -0,0 +1,8 @@
+# @package _global_
+defaults:
+  - override /models: classification/lung_description_decision.yaml
+  - override /datasets: classification/lung_description_decision_datamodule.yaml
+  - override /callbacks: lung_description_decision
+
+project: "lung_description_decision"
+task: "table-classification"

config/experiments/example_table_clustering_kmeans.yaml

@@ -0,0 +1,10 @@
+# @package _global_
+defaults:
+  - override /models: clustering/kmeans
+  - override /datasets: clustering/clustering_credit_cards
+  - override /callbacks: clustering
+
+
+project: "credit_cards"
+task: "table-clustering"
+random_seed: 42

config/experiments/example_table_regression_catboost.yaml

@@ -0,0 +1,10 @@
+# @package _global_
+defaults:
+  - override /models: regression/catboost_regression
+  - override /datasets: qm9
+  - override /callbacks: regression
+
+
+project: "qm9"
+task: "qsar-regression"
+random_seed: 42

dui/app.py

@@ -5,33 +5,28 @@
 from dash.long_callback import DiskcacheLongCallbackManager
 import diskcache
 
-cache = diskcache.Cache("./cache")
-long_callback_manager = DiskcacheLongCallbackManager(cache)
-
-app = dash.Dash(__name__,
-                long_callback_manager=long_callback_manager,
-                use_pages=True,
-                external_stylesheets=[dbc.themes.BOOTSTRAP, dbc.icons.BOOTSTRAP, "dui.css"],
-                external_scripts=["dui.js",
-                                    "https://code.jquery.com/jquery-3.3.1.slim.min.js",
-                                    "https://cdn.jsdelivr.net/npm/[email protected]/dist/umd/popper.min.js",
-                                    "https://cdn.jsdelivr.net/npm/[email protected]/dist/js/bootstrap.min.js"])  # initialising dash app
-dash.register_page(__name__,  path_template="/")
-
-
-def layout():
-    lout = dbc.Container([
 
+lout = dbc.Container([
         dbc.Row([dbc.Col([html.H4("Experiment Configurator", style={"height": 40})]),
-                 dbc.Col([html.Div(html.Img(src=dash.get_asset_url('_innofw_.svg'), style={"height": 40, "width": 60}),
-                                   className="self-align-right")]),
                  html.Span(className="border-bottom")],
-
                 style={"margin-top": 10, "margin-bottom": 10, "margin-right": 5}),
-
         dash.page_container])
-    return lout
 
 
 if __name__ == '__main__':
+    cache = diskcache.Cache("./cache")
+    long_callback_manager = DiskcacheLongCallbackManager(cache)
+
+    app = dash.Dash(__name__,
+                    long_callback_manager=long_callback_manager,
+                    use_pages=True,
+                    external_stylesheets=["bootstrap.min.css",
+                                          ("icons/", "font/bootstrap-icons.css"),
+                                          "dui.css",],
+                    external_scripts=["jquery-3.3.1.slim.min.js",
+                                      "popper.min.js",
+                                      "bootstrap.min.js",
+                                      "dui.js"])  # initialising dash app
+
+    dash.register_page("inintial", path_template="/", layout=lout)
     app.run_server()

dui/assets/dui.css

@@ -1,3 +1,7 @@
+.row{
+  width: 100%;
+}
+
 .self-align-right{
     justify-content: right;
     display: grid;
@@ -38,3 +42,51 @@
   border: 1px solid #888;
   width: 70%; /* Could be more or less, depending on screen size */
 }
+
+/* Tooltip container */
+.tooltip {
+  position: relative;
+  display: inline-block;
+  opacity: 1;
+  z-index: 0;
+}
+
+/* Tooltip text */
+.tooltiptext {
+  visibility: hidden;
+  width: 180px;
+  background-color: #555;
+  color: #fff;
+  text-align: center;
+  padding: 5px 0;
+  border-radius: 6px;
+
+  /* Position the tooltip text */
+  position: absolute;
+  z-index: 1;
+  bottom: 125%;
+  left: 50%;
+  margin-left: -60px;
+
+  /* Fade in tooltip */
+  opacity: 0;
+  transition: opacity 0.3s;
+}
+
+/* Tooltip arrow */
+.tooltip .tooltiptext::after {
+  content: "";
+  position: absolute;
+  top: 100%;
+  left: 50%;
+  margin-left: -5px;
+  border-width: 5px;
+  border-style: solid;
+  border-color: #555 transparent transparent transparent;
+}
+
+/* Show the tooltip text when you mouse over the tooltip container */
+.tooltip:hover .tooltiptext {
+  visibility: visible;
+  opacity: 1;
+}