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Merge pull request #16 from Konohana0608/updates/minor_fixing
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minor fixes as proposed by Odei.
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Konohana0608 authored Jul 16, 2024
2 parents d76cb7c + e3f6519 commit 3d03996
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8 changes: 4 additions & 4 deletions docs/platform_introduction/dashboard.md
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Expand Up @@ -8,18 +8,18 @@ The **Dashboard** hosts the principal view: ```Studies``` (1.).

Under ```Studies```, existing Plans (own Plans, or plans that have been shared by other users (6.)) can be accessed (3.) and managed (4.), and new Plans can be [created](/docs/plan/create_new_plan.md).

In addition, buttons on the top right provide access to notifications, various support material/contact options, and a menu (5.) with the following entries:
In addition, buttons on the top right (5.) provide access to notifications, **Guided Tours**, **Quick Start**, contact options, and a menu with the following entries:

- _**My Account**_: Information about user, option to change password or delete account. Usage overview is also accessible.
- _**Billing Center**_: Access to **Credit Accounts**, **Payment Methods**, **Transactions** and **Usage**.
- _**[Billing Center](/docs/platform_introduction/billing_center.md)**_: Access to **Credit Accounts**, **Payment Methods**, **Transactions** and **Usage**.
- _**Preferences**_: Access to **General Settings**, **Confirmation Settings** and **Create/Edit Tags**.
- **_Organizations_** group of users who can share studies. (see the [o<sup>2</sup>S<sup>2</sup>PARC User Manual](https://docs.osparc.io/#/) for detailed information)
- _**Light/Dark Theme**_: A short **Quick Start** guide, which is also displayed the first time the TI Planning Tool is accessed.
- _**Light/Dark Theme**_: Switch between light or dark mode according to your preference.
- _**About oSPARC**_: List of **Front-end** and **Back-end** technologies employed by the TI Planning Tool
- _**License**_: Information about the TI Planning Tool license, as well as the licenses of the underlying technologies.
- _**Log out**_: Logging out from the **TI Planning Tool**

The user access more functionality such as **_Overview_**, [Study Files](/docs/platform_introduction/data.md), **Sharing**, and **_Services Updates_** (3.) through the three-dot menu (1.) icon (see the [o<sup>2</sup>S<sup>2</sup>PARC User Manual](https://docs.osparc.io/#/) for information on these functionalities as well as the locking states).
The user access more functionality such as **_Overview_**, **[Study Files](/docs/platform_introduction/data.md)**, **Sharing**, and **_Services Updates_** (3.) by clicking on the study card in the Dashboard. Through the three-dot menu (1.) icon, quick access to some operations is provided. (see the [o<sup>2</sup>S<sup>2</sup>PARC User Manual](https://docs.osparc.io/#/) for more information on these functionalities as well as the locking states).
If Services within a Plan need updating, the small circular arrow sign will appear in the bottom right corner (2.) of the Plan
on the **Dashboard**. Clicking this icon will bring you directly to the update menu where you see the current and newest available
versions of each Service and where you can update them either individually or all together (4.).
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2 changes: 1 addition & 1 deletion docs/platform_introduction/data.md
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Expand Up @@ -7,6 +7,6 @@ The Data of a service can be accessed via the **Study Details** menu screen in t
</p>


When changing to this section, you are presented with the file system of the selected Study (1.). By selecting a certain directory, the files within that folder will be displayed in the area to the right (2.). You can navigate, delete, and download files (3.), such as logs or the input/output data of Services. Two principal views are available: an icon and a list view - the latter provides additional information about the file size and the last modification date. Occasionally, it can be necessary to click the ```Reload``` button to refresh the file system tree.
When changing to this section, you are presented with the file system of the selected Study (1.). By selecting a certain directory, the files within that folder will be displayed in the area to the right (2.). You can download files (3.), such as logs or the input/output data of Services. Two principal views are available: an icon and a list view - the latter provides additional information about the file size and the last modification date. Occasionally, it can be necessary to click the ```Reload``` button to refresh the file system tree.

For more information, see the [o<sup>2</sup>S<sup>2</sup>PARC User Manual](https://docs.osparc.io/#/).
4 changes: 2 additions & 2 deletions docs/platform_introduction/overview.md
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### Landing Page

<p align="center">
<img width="90%" src="assets/quickguide/landingpage_v2.png">
<img width="90%" src="assets/quickguide/landingpage.png">
</p>

The Landing Page currently serves primarily for user authentication. Two-factor authentication is required:
- a user name (email address) and password
- an SMS is sent to user's mobile phone number that provides the required one-time 4-digit pin

An account can be requested and created directly through the _**Create Account**_ link on this page, by providing an email address and setting a password. If the user cannot remember the password of an existing account, it can be reset through the _**Create Account**_ link.
An account can be requested and created directly through the _**Create Account**_ link on this page, by providing an email address and setting a password. If the user cannot remember the password of an existing account, it can be reset through the _**Forgot Password?**_ link.
2 changes: 1 addition & 1 deletion docs/platform_introduction/platform.md
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Expand Up @@ -3,7 +3,7 @@
The TI Planning Tool has the following principal views:
* a [Landing Page](/docs/platform_introduction/overview.md), which currently serves primarily for user authentication
* a [Dashboard](/docs/platform_introduction/dashboard.md) that provides an overview of a user's studies (plans) and permits to launch the creation of a [new plan](/docs/plan/create_new_plan.md)
* an overview of the user's [Data](/docs/platform_introduction/data.md)
* an overview of the user's [Data](/docs/platform_introduction/data.md) within the Studies
* the step-by-step planning process for the personalized and non-personalized [TI modes](/docs/background/modes.md)

Personalized flavor only steps::
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8 changes: 5 additions & 3 deletions docs/services/personalizer.md
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Expand Up @@ -8,14 +8,15 @@ As the first step for personalization, provide the data via the file picker: eit

As the initial step for personalization, the user is asked to provide, in the file picker, the data you want to work with. Here you have two options: building an isotropic model which only requires a T1-weighted MR image, or an anisotropic model which requires a DTI with bval & bvac files on top of the T1. If the anisotropic option is desired, all four files should be zipped together.

<table style="width: 100%; border-collapse: separate; border-spacing: 5px; border: 1px solid white">
<div style="width: 100%; display: flex; justify-content: center;">
<table style="border-collapse: separate; border-spacing: 5px;">
<tr>
<td style="padding-left: 10%; vertical-align: top; border: 1px solid white">
<td style="vertical-align: top; border: 1px solid black">

- 📃 `subject_t1.nii.gz`

</td>
<td style="padding-left: 10%; vertical-align: top; border: 1px solid white">
<td style="vertical-align: top; border: 1px solid black">

- 📂 `input_data.zip/`
- 📃 `subject_t1.nii.gz`
Expand All @@ -26,6 +27,7 @@ As the initial step for personalization, the user is asked to provide, in the fi
</td>
</tr>
</table>
</div>

<br>
<p align="center">
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