Update build system #14
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… to use current Eigen calling scheme
This build flag can cause issues for certain architectures. Specifically, when an Eigen dynamic matrix is conservatively resized a copy is made on the stack, which can be too large for the stack, causing SIGSEGV. Removing the flag alleviates the issue.
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Updated code to work with the new CMake build system for ILLIXR. Also brought this fork up to date with the main repo.