Cleanup includes

ICB-DCM · Dec 13, 2023 · a59b9fc · a59b9fc
1 parent c94200f
commit a59b9fc
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Showing 10 changed files with 2 additions and 19 deletions.
diff --git a/include/parpeamici/hierarchicalOptimization.h b/include/parpeamici/hierarchicalOptimization.h
@@ -7,9 +7,7 @@
 
 #include <gsl/gsl-lite.hpp>
 
-#include <cmath>
 #include <memory>
-#include <numeric>
 
 
 namespace parpe {

diff --git a/include/parpeamici/multiConditionProblem.h b/include/parpeamici/multiConditionProblem.h
@@ -15,7 +15,6 @@
 #include <gsl/gsl-lite.hpp>
 
 #include <memory>
-#include <cstdlib>
 
 /** @file multiConditionProblem.h
  *  Interfaces between AMICI model and parPE optimization problem */

diff --git a/include/parpecommon/hdf5Misc.h b/include/parpecommon/hdf5Misc.h
@@ -9,7 +9,6 @@
 #include <exception>
 #include <string>
 #include <mutex>
-#include <cstdarg>
 
 namespace parpe {
 

diff --git a/include/parpecommon/misc.h b/include/parpecommon/misc.h
@@ -4,10 +4,7 @@
 #include <parpecommon/parpeConfig.h>
 
 #include <chrono>
-#include <cstdio>
-#include <memory>
 #include <ostream>
-#include <stdlib.h>
 #include <vector>
 
 #include <gsl/gsl-lite.hpp>

diff --git a/include/parpecommon/model.h b/include/parpecommon/model.h
@@ -4,7 +4,6 @@
 #include <parpecommon/functions.h>
 
 #include <vector>
-#include <memory>
 
 namespace parpe {
 

diff --git a/include/parpeoptimization/localOptimizationCeres.h b/include/parpeoptimization/localOptimizationCeres.h
@@ -3,7 +3,6 @@
 
 #include <parpeoptimization/optimizer.h>
 
-#include <string>
 
 namespace parpe {
 

diff --git a/include/parpeoptimization/localOptimizationIpoptTNLP.h b/include/parpeoptimization/localOptimizationIpoptTNLP.h
@@ -11,8 +11,6 @@
 #include <IpIpoptApplication.hpp>
 #endif
 
-#include <cmath>
-#include <memory>
 #include <mutex>
 
 #include <parpecommon/misc.h>

diff --git a/include/parpeoptimization/multiStartOptimization.h b/include/parpeoptimization/multiStartOptimization.h
@@ -3,7 +3,6 @@
 
 #include <parpeoptimization/optimizationProblem.h>
 
-#include <vector>
 #include <memory>
 
 namespace parpe {

diff --git a/src/parpeamici/amiciMisc.cpp b/src/parpeamici/amiciMisc.cpp
@@ -5,12 +5,11 @@
 #include <amici/logging.h>
 #include <parpecommon/logging.h>
 
+#include <memory>
+
 namespace parpe {
 
-using amici::ExpData;
-using amici::Model;
 using amici::ReturnData;
-using amici::Solver;
 
 std::unique_ptr<ReturnData> run_amici_simulation(
     amici::Solver &solver,

diff --git a/src/parpecommon/misc.cpp b/src/parpecommon/misc.cpp
@@ -1,13 +1,9 @@
 #include <parpecommon/misc.h>
 #include <parpecommon/logging.h>
 
-#include <cassert>
-#include <cerrno>
 #include <execinfo.h>
 #include <cmath>
-#include <cstdarg>
 #include <cstdio>
-#include <cstring>
 #include <sys/types.h>
 #include <ctime>
 #include <unistd.h>
Original file line number	Diff line number	Diff line change
Expand Up		@@ -3,7 +3,6 @@

		#include <parpeoptimization/optimizer.h>

		#include <string>

		namespace parpe {

Expand Down