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Make sure all modules are using latest package versions #3

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CarsonJM opened this issue Mar 17, 2024 · 1 comment
Open

Make sure all modules are using latest package versions #3

CarsonJM opened this issue Mar 17, 2024 · 1 comment
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@hhayden01

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@CarsonJM
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CarsonJM commented Mar 17, 2024 •
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Compare pipeline module versions to bioconda and make sure they match
@CarsonJM CarsonJM changed the title Makre sure all modules are using latest package versions Make sure all modules are using latest package versions Mar 17, 2024
@CarsonJM
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Local modules

  • kneaddata/database
  • kneaddata/kneaddata
  • kneaddata/readcounts
  • metaphlan/sgbtogtdbprofile
  • humann/downloadchocophlandb
  • humann/downloadunirefdb

nf-core modules

  • cat/fastq
  • fastqc
  • metaphlan/makedb
  • metaphlan/metaphlan
  • metaphlan/mergemetaphlantables
  • multiqc

@hhayden01 hhayden01 self-assigned this Mar 25, 2024
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@CarsonJM @hhayden01