Skip to content
@GenomicMedLab

The Wagner/Chaudhari Laboratories at the Institute for Genomic Medicine

The Wagner and Chaudhari Laboratories develop methods and tools for translating genomic variation in patients to clinical actionability

Popular repositories Loading

  1. cool-seq-tool cool-seq-tool Public

    Python 4

  2. variation-normalizer-manuscript variation-normalizer-manuscript Public

    Issue tracker for Variation Normalizer manuscript work

    Jupyter Notebook 2

  3. agct agct Public

    Another Genome Conversion Tool: Python frontend to Rust chainfile crate

    Python 2

  4. preferredlist preferredlist Public

    Lists of genes and hotspots for filter pass-through inspection in variant interpretation

    1

  5. r-dgidb r-dgidb Public

    In-progress R wrapper for DGIdb

    R 1

  6. regbot regbot Public

    Python 1

Repositories

Showing 10 of 32 repositories
  • wags-tails Public

    Data acquisition tools for Wagnerds

    GenomicMedLab/wags-tails’s past year of commit activity
    Python 0 MIT 0 13 1 Updated Dec 1, 2024
  • r-dgidb Public

    In-progress R wrapper for DGIdb

    GenomicMedLab/r-dgidb’s past year of commit activity
    R 1 0 3 1 Updated Nov 30, 2024
  • dgipy Public

    Python client for fast access to the Drug-Gene Interaction Database (DGIDb)

    GenomicMedLab/dgipy’s past year of commit activity
    Python 0 MIT 0 14 1 Updated Nov 29, 2024
  • agct Public

    Another Genome Conversion Tool: Python frontend to Rust chainfile crate

    GenomicMedLab/agct’s past year of commit activity
    Python 2 MIT 0 2 0 Updated Nov 29, 2024
  • cool-seq-tool Public
    GenomicMedLab/cool-seq-tool’s past year of commit activity
    Python 4 MIT 0 37 1 Updated Nov 26, 2024
  • CSHL-Variant-Representation-and-Annotation Public

    This repo contains exercises for the CSHL 2024 Seqtec course

    GenomicMedLab/CSHL-Variant-Representation-and-Annotation’s past year of commit activity
    0 MIT 0 0 0 Updated Nov 20, 2024
  • bioinformatics-python Public

    This repo contains exercises for the CSHL 2024 Seqtec course

    GenomicMedLab/bioinformatics-python’s past year of commit activity
    Jupyter Notebook 1 MIT 1 1 0 Updated Nov 20, 2024
  • variant-interpretation Public

    This repo contains exercises for the CSHL 2024 Seqtec course

    GenomicMedLab/variant-interpretation’s past year of commit activity
    Jupyter Notebook 0 MIT 1 0 0 Updated Nov 20, 2024
  • software-templates Public

    Cookiecutter templates for lab software projects

    GenomicMedLab/software-templates’s past year of commit activity
    Python 0 MIT 0 16 0 Updated Nov 12, 2024
  • regbot Public
    GenomicMedLab/regbot’s past year of commit activity
    Python 1 MIT 0 4 0 Updated Nov 5, 2024
View all repositories

Top languages

Loading…

Most used topics

Loading…