Skip to content

Licencing

Jump to bottom
GarrettJenkinson edited this page May 29, 2018 · 1 revision

All code authored by Garrett Jenkinson or Jordi Abante in informME is licensed under a GPLv3 license; exceptions to GPL licensing are the files contained in the following directories:

  • informME/third_party/global_optim

  • informME/third_party/maxent

These files have their own licensing information in their headers. Thanks to Arnold Neumaier and Ali Mohammad-Djafari for their permissions to modify and distribute their software with informME.

If you use informME, please cite:

[1] Jenkinson, G., Pujadas, E., Goutsias, J., and Feinberg, A.P. (2017), Potential energy landscapes identify the information-theoretic nature of the epigenome, Nature Genetics, 49: 719-729.

[2] Jenkinson, G., Abante, J., Feinberg, A.P., and Goutsias, J. (2018), An information-theoretic approach to the modeling and analysis of whole-genome bisulfite sequencing data, BMC Bioinformatics, 19:87, https://doi.org/10.1186/s12859-018-2086-5.

[3] Jenkinson, G., Abante, J., Koldobskiy, M., Feinberg, A.P., and Goutsias, J. (2019), Ranking genomic features using an information-theoretic measure of epigenetic discordance, BMC Bioinformatics, 20:175, https://doi.org/10.1186/s12859-019-2777-6.

Clone this wiki locally