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fe_chain -> chain_from_arrays #74

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Jul 6, 2024
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fe_chain -> chain_from_arrays #74

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24 changes: 12 additions & 12 deletions src/geometry.jl
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Original file line number Diff line number Diff line change
Expand Up @@ -2300,7 +2300,7 @@ abstract type AbstractChain

# Basic constructors

- [`fe_chain`](@ref)
- [`chain_from_arrays`](@ref)

"""
abstract type AbstractChain <: gk.AbstractType end
Expand All @@ -2315,13 +2315,13 @@ struct GenericChain{A,B,C,D,E,F,G} <: AbstractChain
outwards_normals::G
end

function fe_chain(args...)
function chain_from_arrays(args...)
GenericChain(args...)
end

"""
"""
function fe_chain(
function chain_from_arrays(
node_coordinates,
face_nodes,
face_reference_id,
Expand All @@ -2330,7 +2330,7 @@ function fe_chain(
physical_faces = Dict{String,Vector{eltype(eltype(face_reference_id))}}(),
outwards_normals = nothing
)
fe_chain(
chain_from_arrays(
node_coordinates,
face_nodes,
face_reference_id,
Expand Down Expand Up @@ -2417,7 +2417,7 @@ function simplexify_unit_n_cube(geo)
ncells = length(cell_nodes)
cell_reference_id = fill(Int8(1),ncells)
reference_cells = [ref_cell]
chain = fe_chain(
chain = chain_from_arrays(
node_coords,
cell_nodes,
cell_reference_id,
Expand Down Expand Up @@ -2515,7 +2515,7 @@ function simplexify_reference_face(ref_face)
face_nodes_inter[face] = my_nodes
end
ref_inter =
chain = Chain(;
chain = chain_from_arrays(;
num_dims=Val(D),
node_coordinates=node_coordinates_inter,
face_nodes = face_nodes_inter,
Expand Down Expand Up @@ -2751,7 +2751,7 @@ function cartesian_chain(domain,cells_per_dir)
reference_cells = [ref_cell]
interior_cells = collect(Int32,1:length(cell_nodes))
groups = Dict(["interior"=>interior_cells,"$D-face-1"=>interior_cells])
chain = fe_chain(
chain = chain_from_arrays(
node_coords,
cell_nodes,
cell_reference_id,
Expand Down Expand Up @@ -2816,7 +2816,7 @@ function structured_simplex_chain(domain,cells_per_dir)
reference_cells = reference_faces(ref_simplex_mesh,D)
interior_cells = collect(Int32,1:length(cell_nodes))
groups = Dict(["interior"=>interior_cells,"$D-face-1"=>interior_cells])
chain = fe_chain(
chain = chain_from_arrays(
node_coords,
cell_nodes,
cell_reference_id,
Expand Down Expand Up @@ -3062,7 +3062,7 @@ function visualization_mesh_from_mesh(mesh,dim,ids=num_faces(mesh,dim);order=not
vnode_prev = vnode + 1
end
vcell_to_vnodes = JaggedArray(vcell_to_vnodes_data,vcell_to_vnodes_ptrs)
vchain = fe_chain(
vchain = chain_from_arrays(
vnode_to_coords,
vcell_to_vnodes,
vcell_to_vrefid,
Expand Down Expand Up @@ -3157,7 +3157,7 @@ function refine_reference_geometry(geo,resolution)
end
end
refface = lagrange_mesh_face(geo,1)
chain = Chain(;
chain = chain_from_arrays(;
num_dims=Val(2),
node_coordinates = X,
face_nodes = T,
Expand Down Expand Up @@ -3210,7 +3210,7 @@ function refine_reference_geometry(geo,resolution)
end
end
refface = lagrange_mesh_face(geo,1)
chain = fe_chain(
chain = chain_from_arrays(
X,
T,
fill(1,length(T)),
Expand Down Expand Up @@ -4028,7 +4028,7 @@ function two_level_mesh(coarse_mesh,fine_mesh;boundary_names=nothing)
final_cell_to_refid = fill(1,n_final_cells)
refid_to_fine_refcell = [fine_refcell]

chain = fe_chain(
chain = chain_from_arrays(
final_node_to_x,
JaggedArray(final_cell_local_node_to_final_node),
final_cell_to_refid,
Expand Down
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