update changelog and update database

GC-HBOC · Jul 5, 2024 · 99e1be4 · 99e1be4
1 parent 8ac562c
commit 99e1be4
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Showing 3 changed files with 30 additions and 32 deletions.
diff --git a/resources/update_database/update_database_11.sql b/resources/update_database/update_database_11.sql
@@ -1,9 +1,9 @@
-ALTER TABLE `HerediVar_ahdoebm1`.`import_queue` 
+ALTER TABLE `HerediVar`.`import_queue` 
 CHANGE COLUMN `source` `source` ENUM('heredicare', 'vcf', 'heredicare_complete', 'heredicare_specific') NOT NULL DEFAULT 'heredicare' ;
 
 UPDATE import_queue SET source = 'heredicare_complete' WHERE source = 'heredicare';
 
-ALTER TABLE `HerediVar_ahdoebm1`.`import_queue` 
+ALTER TABLE `HerediVar`.`import_queue` 
 CHANGE COLUMN `source` `source` ENUM('vcf', 'heredicare_complete', 'heredicare_specific') NOT NULL DEFAULT 'heredicare_complete' ;
 
 

diff --git a/src/frontend_celery/webapp/templates/index.html b/src/frontend_celery/webapp/templates/index.html
@@ -94,9 +94,8 @@ <h4>Overview</h4>
     <h4>Changelog</h4>
 
 
-    <div class="underline">v 1.12.1 ()</div>
+    <div class="underline">v 1.13 (05.07.2024)</div>
     <div class="btn-pvs">!! Scores from likelihood ratio tests are currently not available from HerediCaRe.</div>
-    <div class="btn-pvs">!! HerediCaRe upload is currently disabled.</div>
     <div>
         General changes:
         <ul>
@@ -105,6 +104,7 @@ <h4>Changelog</h4>
             <li>Updated PFAM protein domain external links to link to InterPro</li>
             <li>Increased login idle timer</li>
             <li>Now the REVEL score of the best transcript is shown first</li>
+            <li>Enabled HerediCaRe uploads</li>
         </ul>
         Bugfixes:
         <ul>
@@ -122,32 +122,6 @@ <h4>Changelog</h4>
         </ul>
     </div>
 
-    <div class="underline">v 1.12 (17.06.2024)</div>
-    <div>
-        General changes:
-        <ul>
-            <li>
-                Added updated classification schemes:
-                <ul>
-                    <li>PALB2: v1.0.0 -> v1.1.0</li>
-                    <li>ATM: v1.1.0 -> v1.3.0</li>
-                    <li>BRCA1: v1.0.0 -> v1.1.0</li>
-                    <li>BRCA2: v1.0.0 -> v1.1.0</li>
-                </ul>
-            </li>
-            <li>Previously, moderate benign criteria were colored in pink. Now, very strong benign criteria are shown in this color.</li>
-            <li>Removed extra download for structural variants. Instead they are now combined in one file with small variants. Also, IGV now shows one track for all classified variants.</li>
-            <li>Improved session security</li>
-            <li>Added an API endpoint for access of consensus classifications programmatically</li>
-            <li>Added API documentation</li>
-        </ul>
-        Bugfixes:
-        <ul>
-            <li>Selecting pm2_sup in ATM gene specific scheme or bp1_str in BRCA1/2 schemes caused wrong calculated class when selecting another supporting or strong criterium.</li>
-            <li>The force download url for erroneous vcfs was broken</li>
-            <li>Fixed a bug where the header line for annotated literature was incorrectly called 'pubmed' instead of 'literature'</li>
-        </ul>
-    </div>
 
 
 

diff --git a/src/frontend_celery/webapp/templates/main/changelog.html b/src/frontend_celery/webapp/templates/main/changelog.html
@@ -9,10 +9,34 @@
 <h1 class="bst"> {% block title %} Changelog {% endblock %} </h1>
 
 
+<div class="underline">v 1.12 (17.06.2024)</div>
+<div>
+    General changes:
+    <ul>
+        <li>
+            Added updated classification schemes:
+            <ul>
+                <li>PALB2: v1.0.0 -> v1.1.0</li>
+                <li>ATM: v1.1.0 -> v1.3.0</li>
+                <li>BRCA1: v1.0.0 -> v1.1.0</li>
+                <li>BRCA2: v1.0.0 -> v1.1.0</li>
+            </ul>
+        </li>
+        <li>Previously, moderate benign criteria were colored in pink. Now, very strong benign criteria are shown in this color.</li>
+        <li>Removed extra download for structural variants. Instead they are now combined in one file with small variants. Also, IGV now shows one track for all classified variants.</li>
+        <li>Improved session security</li>
+        <li>Added an API endpoint for access of consensus classifications programmatically</li>
+        <li>Added API documentation</li>
+    </ul>
+    Bugfixes:
+    <ul>
+        <li>Selecting pm2_sup in ATM gene specific scheme or bp1_str in BRCA1/2 schemes caused wrong calculated class when selecting another supporting or strong criterium.</li>
+        <li>The force download url for erroneous vcfs was broken</li>
+        <li>Fixed a bug where the header line for annotated literature was incorrectly called 'pubmed' instead of 'literature'</li>
+    </ul>
+</div>
 
 <div class="underline">v 1.11 (31.05.2024)</div>
-<div class="btn-pvs">!! Scores from likelihood ratio tests are currently not available from HerediCaRe.</div>
-<div class="btn-pvs">!! HerediCaRe upload is currently disabled.</div>
 <div>
     General changes:
     <ul>