Merge pull request #7 from FRAMverse/fix/docs

Fix/docs
FRAMverse · Mar 6, 2024 · 612db6d · 612db6d
2 parents c490c9a + 709092a
commit 612db6d
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Showing 3 changed files with 5 additions and 5 deletions.
diff --git a/R/report_fishery_mortality.R b/R/report_fishery_mortality.R
@@ -111,17 +111,17 @@ fishery_mortality <- function(fram_db, run_id = NULL, msp = TRUE) {
 coho_stock_mortality <- function(fram_db, run_id = NULL, stock_id = NULL, top_n = 10){
 
   # check for null ids
-  if (is.null(.env$run_id) | is.null(.env$stock_id)) {
+  if (is.null(run_id) | is.null(stock_id)) {
     rlang::abort("Both a run_id and stock_id must be supplied")
   }
 
   # make sure run ids are integers
-  if (!is.numeric(.env$run_id)) {
+  if (!is.numeric(run_id)) {
     rlang::abort("Run ID must be and integer")
   }
 
   # make sure run ids are integers
-  if (!is.numeric(.env$stock_id)) {
+  if (!is.numeric(stock_id)) {
     rlang::abort("Stock ID must be and integer")
   }
 

diff --git a/R/report_stock_mortality.R b/R/report_stock_mortality.R
@@ -5,7 +5,7 @@
 #' @examples
 #' \dontrun{
 #' fram_db |>
-#'  stock_mortality(run=132) |>
+#'  stock_mortality(run_id=132) |>
 #'  filter(stock_id == 17, fishery_id == 36)
 #'
 #' }

diff --git a/man/stock_mortality.Rd b/man/stock_mortality.Rd