ci.

pynxtools/dataconverter/readers/sts/helper.py

@@ -101,7 +101,7 @@ def overwrite_fields(template, data_dict,
             path_to_data = data_path[unit]
             unit = transform_to_intended_dt(data_dict[path_to_data] if path_to_data in data_dict
                                             else None)
-            template[new_temp_key + "/@units"] =
+            template[new_temp_key + "/@units"] = unit
 
 
 def nested_path_to_slash_separated_path(nested_dict: dict,

pynxtools/dataconverter/readers/sts/reader.py

@@ -195,32 +195,31 @@ def read(self,
             fl_obj: object
             if ext in ['sxm', 'dat']:
                 data_file = file
-            if ext == 'json':
-                with open(file, mode="r", encoding="utf-8") as fl_obj:
-                    config_dict = json.load(fl_obj)
             if ext in ['yaml', 'yml']:
-                with open(file, mode="r", encoding="utf-8") as fl_obj:
+                with open(file, encoding="utf-8", mode="r") as fl_obj:
                     eln_dict = flatten_and_replace(
                         FlattenSettings(
                             yaml.safe_load(fl_obj),
-                            CONVERT_DICT,
-                            REPLACE_NESTED
+                            replace_nested=REPLACE_NESTED,
+                            convert_dict=CONVERT_DICT,
                         )
                     )
+            if ext == 'json':
+                with open(file, mode="r", encoding="utf-8") as fl_obj:
+                    config_dict = json.load(fl_obj)
 
         # Get callable object that has parser inside
         parser = Spm().get_appropriate_parser(eln_dict)
         parser(template, data_file, config_dict, eln_dict)
 
         for key, val in template.items():
-
-            if val is None:
-                del template[key]
-            else:
+            if val is not None:
                 filled_template[key] = val
+            else:
+                del template[key]
+
         if not filled_template.keys():
-            raise ValueError("Reader could not read anything! Check for input files and the"
-                             " corresponding extention.")
+            raise ValueError("Reader could not read anything! Check for input files")
         return filled_template
 
 

pynxtools/dataconverter/readers/xrd/reader.py

@@ -91,10 +91,10 @@ def get_template_from_xrd_reader(nxdl_name, file_paths):
 
     Parameters
     ----------
-    nxdl_name : str_
+    nxdl_name : str
         Name of nxdl definition
-    file_paths : str
-        _description_
+    file_paths : Tuple[str]
+        Tuple of path of files.
 
     Returns
     -------
@@ -141,8 +141,7 @@ def read(self,
                     eln_dict = flatten_and_replace(
                         FlattenSettings(
                             yaml.safe_load(fl_obj),
-                            CONVERT_DICT,
-                            REPLACE_NESTED
+                            CONVERT_DICT, REPLACE_NESTED
                         )
                     )
             elif ext in XRD_FILE_EXTENSIONS: