API update

datamodel_b07_tc/__init__.py

@@ -1,3 +1,3 @@
 
 __URL__ = "https://github.com/FAIRChemistry/datamodel_b07_tc.git"
-__COMMIT__ = "c7407c28baaf7f0667ca7e50953202a7c1ae7ff5"
+__COMMIT__ = "ac55b72bed16a0027ba585ed1fa2168c71f58708"

datamodel_b07_tc/core/author.py

@@ -29,5 +29,5 @@ class Author(sdRDM.DataModel):
         default="https://github.com/FAIRChemistry/datamodel_b07_tc.git"
     )
     __commit__: Optional[str] = PrivateAttr(
-        default="c7407c28baaf7f0667ca7e50953202a7c1ae7ff5"
+        default="ac55b72bed16a0027ba585ed1fa2168c71f58708"
     )

datamodel_b07_tc/core/calibration.py

@@ -47,5 +47,5 @@ class Calibration(sdRDM.DataModel):
         default="https://github.com/FAIRChemistry/datamodel_b07_tc.git"
     )
     __commit__: Optional[str] = PrivateAttr(
-        default="c7407c28baaf7f0667ca7e50953202a7c1ae7ff5"
+        default="ac55b72bed16a0027ba585ed1fa2168c71f58708"
     )

datamodel_b07_tc/core/chemical.py

@@ -65,5 +65,5 @@ class Chemical(sdRDM.DataModel):
         default="https://github.com/FAIRChemistry/datamodel_b07_tc.git"
     )
     __commit__: Optional[str] = PrivateAttr(
-        default="c7407c28baaf7f0667ca7e50953202a7c1ae7ff5"
+        default="ac55b72bed16a0027ba585ed1fa2168c71f58708"
     )

datamodel_b07_tc/core/data.py

@@ -5,8 +5,8 @@
 from sdRDM.base.listplus import ListPlus
 from sdRDM.base.utils import forge_signature, IDGenerator
 
-from astropy.units import UnitBase
 from datetime import datetime as Datetime
+from astropy.units import UnitBase
 
 from .quantity import Quantity
 
@@ -41,5 +41,5 @@ class Data(sdRDM.DataModel):
         default="https://github.com/FAIRChemistry/datamodel_b07_tc.git"
     )
     __commit__: Optional[str] = PrivateAttr(
-        default="c7407c28baaf7f0667ca7e50953202a7c1ae7ff5"
+        default="ac55b72bed16a0027ba585ed1fa2168c71f58708"
     )

datamodel_b07_tc/core/dataset.py

@@ -6,11 +6,11 @@
 from sdRDM.base.utils import forge_signature, IDGenerator
 
 
-from .speciesdata import SpeciesData
-from .measurement import Measurement
+from .generalinformation import GeneralInformation
 from .plantsetup import PlantSetup
+from .measurement import Measurement
+from .speciesdata import SpeciesData
 from .experiment import Experiment
-from .generalinformation import GeneralInformation
 
 
 @forge_signature
@@ -38,7 +38,7 @@ class Dataset(sdRDM.DataModel):
         default="https://github.com/FAIRChemistry/datamodel_b07_tc.git"
     )
     __commit__: Optional[str] = PrivateAttr(
-        default="c7407c28baaf7f0667ca7e50953202a7c1ae7ff5"
+        default="ac55b72bed16a0027ba585ed1fa2168c71f58708"
     )
 
     def add_to_experiments(

datamodel_b07_tc/core/device.py

@@ -39,5 +39,5 @@ class Device(sdRDM.DataModel):
         default="https://github.com/FAIRChemistry/datamodel_b07_tc.git"
     )
     __commit__: Optional[str] = PrivateAttr(
-        default="c7407c28baaf7f0667ca7e50953202a7c1ae7ff5"
+        default="ac55b72bed16a0027ba585ed1fa2168c71f58708"
     )

datamodel_b07_tc/core/experiment.py

@@ -6,15 +6,15 @@
 from sdRDM.base.utils import forge_signature, IDGenerator
 
 
-from .calibration import Calibration
-from .species import Species
-from .metadata import Metadata
 from .measurementtype import MeasurementType
+from .species import Species
 from .chemicalformula import ChemicalFormula
-from .speciesdata import SpeciesData
+from .metadata import Metadata
+from .plantsetup import PlantSetup
 from .data import Data
+from .calibration import Calibration
 from .measurement import Measurement
-from .plantsetup import PlantSetup
+from .speciesdata import SpeciesData
 
 
 @forge_signature
@@ -50,7 +50,7 @@ class Experiment(sdRDM.DataModel):
         default="https://github.com/FAIRChemistry/datamodel_b07_tc.git"
     )
     __commit__: Optional[str] = PrivateAttr(
-        default="c7407c28baaf7f0667ca7e50953202a7c1ae7ff5"
+        default="ac55b72bed16a0027ba585ed1fa2168c71f58708"
     )
 
     def add_to_measurements(

datamodel_b07_tc/core/generalinformation.py

@@ -39,7 +39,7 @@ class GeneralInformation(sdRDM.DataModel):
         default="https://github.com/FAIRChemistry/datamodel_b07_tc.git"
     )
     __commit__: Optional[str] = PrivateAttr(
-        default="c7407c28baaf7f0667ca7e50953202a7c1ae7ff5"
+        default="ac55b72bed16a0027ba585ed1fa2168c71f58708"
     )
 
     def add_to_authors(

datamodel_b07_tc/core/input.py

@@ -7,8 +7,8 @@
 
 
 from .reactantrole import ReactantRole
-from .chemical import Chemical
 from .stoichiometry import Stoichiometry
+from .chemical import Chemical
 
 
 @forge_signature
@@ -31,7 +31,7 @@ class Input(sdRDM.DataModel):
         default="https://github.com/FAIRChemistry/datamodel_b07_tc.git"
     )
     __commit__: Optional[str] = PrivateAttr(
-        default="c7407c28baaf7f0667ca7e50953202a7c1ae7ff5"
+        default="ac55b72bed16a0027ba585ed1fa2168c71f58708"
     )
 
     def add_to_component(

datamodel_b07_tc/core/insulation.py

@@ -32,5 +32,5 @@ class Insulation(sdRDM.DataModel):
         default="https://github.com/FAIRChemistry/datamodel_b07_tc.git"
     )
     __commit__: Optional[str] = PrivateAttr(
-        default="c7407c28baaf7f0667ca7e50953202a7c1ae7ff5"
+        default="ac55b72bed16a0027ba585ed1fa2168c71f58708"
     )

datamodel_b07_tc/core/massflowmeter.py

@@ -32,5 +32,5 @@ class MassFlowMeter(Device):
         default="https://github.com/FAIRChemistry/datamodel_b07_tc.git"
     )
     __commit__: Optional[str] = PrivateAttr(
-        default="c7407c28baaf7f0667ca7e50953202a7c1ae7ff5"
+        default="ac55b72bed16a0027ba585ed1fa2168c71f58708"
     )

datamodel_b07_tc/core/measurement.py

@@ -5,14 +5,14 @@
 from sdRDM.base.listplus import ListPlus
 from sdRDM.base.utils import forge_signature, IDGenerator
 
-from astropy.units import UnitBase
 from datetime import datetime as Datetime
+from astropy.units import UnitBase
 
 from .quantity import Quantity
 from .data import Data
-from .datatype import DataType
-from .metadata import Metadata
 from .measurementtype import MeasurementType
+from .metadata import Metadata
+from .datatype import DataType
 
 
 @forge_signature
@@ -46,15 +46,15 @@ class Measurement(sdRDM.DataModel):
         default="https://github.com/FAIRChemistry/datamodel_b07_tc.git"
     )
     __commit__: Optional[str] = PrivateAttr(
-        default="c7407c28baaf7f0667ca7e50953202a7c1ae7ff5"
+        default="ac55b72bed16a0027ba585ed1fa2168c71f58708"
     )
 
     def add_to_metadata(
         self,
         parameter: Optional[str] = None,
         value: Union[str, float, Datetime, None] = None,
         abbreviation: Optional[str] = None,
-        data_type: Union[DataType, str, None] = None,
+        type: Optional[DataType] = None,
         mode: Optional[str] = None,
         unit: Optional[UnitBase] = None,
         description: Optional[str] = None,
@@ -68,7 +68,7 @@ def add_to_metadata(
             parameter (): Name of the parameter.. Defaults to None
             value (): value of the parameter.. Defaults to None
             abbreviation (): abbreviation for the parameter.. Defaults to None
-            data_type (): type of the parameter.. Defaults to None
+            type (): type of the parameter.. Defaults to None
             mode (): mode of the parameter. E.g., on and off.. Defaults to None
             unit (): unit of the parameter.. Defaults to None
             description (): description of the parameter.. Defaults to None
@@ -78,7 +78,7 @@ def add_to_metadata(
             "parameter": parameter,
             "value": value,
             "abbreviation": abbreviation,
-            "data_type": data_type,
+            "type": type,
             "mode": mode,
             "unit": unit,
             "description": description,

datamodel_b07_tc/core/metadata.py

@@ -4,8 +4,8 @@
 from pydantic import Field, PrivateAttr
 from sdRDM.base.utils import forge_signature, IDGenerator
 
-from astropy.units import UnitBase
 from datetime import datetime as Datetime
+from astropy.units import UnitBase
 
 from .datatype import DataType
 
@@ -35,7 +35,7 @@ class Metadata(sdRDM.DataModel):
         description="abbreviation for the parameter.",
     )
 
-    data_type: Union[DataType, str, None] = Field(
+    type: Optional[DataType] = Field(
         default=None,
         description="type of the parameter.",
     )
@@ -59,5 +59,5 @@ class Metadata(sdRDM.DataModel):
         default="https://github.com/FAIRChemistry/datamodel_b07_tc.git"
     )
     __commit__: Optional[str] = PrivateAttr(
-        default="c7407c28baaf7f0667ca7e50953202a7c1ae7ff5"
+        default="ac55b72bed16a0027ba585ed1fa2168c71f58708"
     )

datamodel_b07_tc/core/output.py

@@ -7,8 +7,8 @@
 
 
 from .reactantrole import ReactantRole
-from .chemical import Chemical
 from .stoichiometry import Stoichiometry
+from .chemical import Chemical
 
 
 @forge_signature
@@ -31,7 +31,7 @@ class Output(sdRDM.DataModel):
         default="https://github.com/FAIRChemistry/datamodel_b07_tc.git"
     )
     __commit__: Optional[str] = PrivateAttr(
-        default="c7407c28baaf7f0667ca7e50953202a7c1ae7ff5"
+        default="ac55b72bed16a0027ba585ed1fa2168c71f58708"
     )
 
     def add_to_component(

datamodel_b07_tc/core/parameter.py

@@ -31,5 +31,5 @@ class Parameter(sdRDM.DataModel):
         default="https://github.com/FAIRChemistry/datamodel_b07_tc.git"
     )
     __commit__: Optional[str] = PrivateAttr(
-        default="c7407c28baaf7f0667ca7e50953202a7c1ae7ff5"
+        default="ac55b72bed16a0027ba585ed1fa2168c71f58708"
     )

datamodel_b07_tc/core/plantsetup.py

@@ -6,13 +6,13 @@
 from sdRDM.base.utils import forge_signature, IDGenerator
 
 
-from .input import Input
-from .chemical import Chemical
-from .tubing import Tubing
 from .output import Output
-from .material import Material
 from .insulation import Insulation
+from .chemical import Chemical
+from .tubing import Tubing
 from .device import Device
+from .input import Input
+from .material import Material
 
 
 @forge_signature
@@ -53,7 +53,7 @@ class PlantSetup(sdRDM.DataModel):
         default="https://github.com/FAIRChemistry/datamodel_b07_tc.git"
     )
     __commit__: Optional[str] = PrivateAttr(
-        default="c7407c28baaf7f0667ca7e50953202a7c1ae7ff5"
+        default="ac55b72bed16a0027ba585ed1fa2168c71f58708"
     )
 
     def add_to_devices(

datamodel_b07_tc/core/potentiostat.py

@@ -4,9 +4,9 @@
 from sdRDM.base.utils import forge_signature, IDGenerator
 
 
-from .measurement import Measurement
 from .metadata import Metadata
 from .device import Device
+from .measurement import Measurement
 
 
 @forge_signature
@@ -33,5 +33,5 @@ class Potentiostat(Device):
         default="https://github.com/FAIRChemistry/datamodel_b07_tc.git"
     )
     __commit__: Optional[str] = PrivateAttr(
-        default="c7407c28baaf7f0667ca7e50953202a7c1ae7ff5"
+        default="ac55b72bed16a0027ba585ed1fa2168c71f58708"
     )

datamodel_b07_tc/core/pump.py

@@ -4,8 +4,8 @@
 from sdRDM.base.utils import forge_signature, IDGenerator
 
 
-from .pumptype import PumpType
 from .device import Device
+from .pumptype import PumpType
 
 
 @forge_signature
@@ -27,5 +27,5 @@ class Pump(Device):
         default="https://github.com/FAIRChemistry/datamodel_b07_tc.git"
     )
     __commit__: Optional[str] = PrivateAttr(
-        default="c7407c28baaf7f0667ca7e50953202a7c1ae7ff5"
+        default="ac55b72bed16a0027ba585ed1fa2168c71f58708"
     )

datamodel_b07_tc/core/speciesdata.py

@@ -5,10 +5,10 @@
 from sdRDM.base.utils import forge_signature, IDGenerator
 
 
+from .chemicalformula import ChemicalFormula
+from .data import Data
 from .calibration import Calibration
 from .species import Species
-from .data import Data
-from .chemicalformula import ChemicalFormula
 
 
 @forge_signature
@@ -55,5 +55,5 @@ class SpeciesData(sdRDM.DataModel):
         default="https://github.com/FAIRChemistry/datamodel_b07_tc.git"
     )
     __commit__: Optional[str] = PrivateAttr(
-        default="c7407c28baaf7f0667ca7e50953202a7c1ae7ff5"
+        default="ac55b72bed16a0027ba585ed1fa2168c71f58708"
     )

datamodel_b07_tc/core/stoichiometry.py

@@ -59,5 +59,5 @@ class Stoichiometry(sdRDM.DataModel):
         default="https://github.com/FAIRChemistry/datamodel_b07_tc.git"
     )
     __commit__: Optional[str] = PrivateAttr(
-        default="c7407c28baaf7f0667ca7e50953202a7c1ae7ff5"
+        default="ac55b72bed16a0027ba585ed1fa2168c71f58708"
     )

datamodel_b07_tc/core/thermocouple.py

@@ -27,5 +27,5 @@ class Thermocouple(Device):
         default="https://github.com/FAIRChemistry/datamodel_b07_tc.git"
     )
     __commit__: Optional[str] = PrivateAttr(
-        default="c7407c28baaf7f0667ca7e50953202a7c1ae7ff5"
+        default="ac55b72bed16a0027ba585ed1fa2168c71f58708"
     )

datamodel_b07_tc/core/tubing.py

@@ -5,8 +5,8 @@
 from sdRDM.base.utils import forge_signature, IDGenerator
 
 
-from .material import Material
 from .insulation import Insulation
+from .material import Material
 
 
 @forge_signature
@@ -48,5 +48,5 @@ class Tubing(sdRDM.DataModel):
         default="https://github.com/FAIRChemistry/datamodel_b07_tc.git"
     )
     __commit__: Optional[str] = PrivateAttr(
-        default="c7407c28baaf7f0667ca7e50953202a7c1ae7ff5"
+        default="ac55b72bed16a0027ba585ed1fa2168c71f58708"
     )