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Merge pull request #45 from European-XFEL/202402
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Install the 202402 environment
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takluyver authored Sep 23, 2024
2 parents c446615 + 948f3c8 commit b6d9961
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1 change: 1 addition & 0 deletions .gitignore
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# Local Netlify folder
.netlify
*~
103 changes: 103 additions & 0 deletions applications/imagej/environment.lock.yml
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name: pyimagej
channels:
- nodefaults
- conda-forge
dependencies:
- _libgcc_mutex=0.1
- _openmp_mutex=4.5
- aom=3.8.2
- blosc=1.21.5
- brotli=1.1.0
- brotli-bin=1.1.0
- brunsli=0.1
- bzip2=1.0.8
- c-blosc2=2.14.3
- ca-certificates=2024.2.2
- certifi=2024.2.2
- charls=2.4.2
- contourpy=1.2.1
- cycler=0.12.1
- dav1d=1.2.1
- fonttools=4.51.0
- freetype=2.12.1
- giflib=5.2.2
- imagecodecs=2023.9.4
- imglyb=2.1.0
- jgo=1.0.5
- jpype1=1.5.0
- jxrlib=1.1
- kiwisolver=1.4.5
- labeling=0.1.12
- lcms2=2.15
- ld_impl_linux-64=2.40
- lerc=4.0.0
- libaec=1.1.3
- libavif16=1.0.4
- libblas=3.9.0
- libbrotlicommon=1.1.0
- libbrotlidec=1.1.0
- libbrotlienc=1.1.0
- libcblas=3.9.0
- libdeflate=1.18
- libexpat=2.6.2
- libffi=3.4.2
- libgcc-ng=13.2.0
- libgfortran-ng=13.2.0
- libgfortran5=13.2.0
- libgomp=13.2.0
- libjpeg-turbo=2.1.5.1
- liblapack=3.9.0
- libnsl=2.0.1
- libopenblas=0.3.27
- libpng=1.6.43
- libsqlite=3.45.2
- libstdcxx-ng=13.2.0
- libtiff=4.5.1
- libuuid=2.38.1
- libwebp-base=1.3.2
- libxcb=1.15
- libxcrypt=4.4.36
- libzlib=1.2.13
- libzopfli=1.0.3
- lz4-c=1.9.4
- matplotlib-base=3.8.4
- maven=3.9.6
- munkres=1.1.4
- ncurses=6.4.20240210
- numpy=1.26.4
- openjdk=8.0.382
- openjpeg=2.5.0
- openssl=3.2.1
- packaging=24.0
- pandas=2.2.1
- pillow=9.5.0
- pip=24.0
- psutil=5.9.8
- pthread-stubs=0.4
- pyimagej=1.4.1
- pyparsing=3.1.2
- python=3.11.8
- python-dateutil=2.9.0
- python-tzdata=2024.1
- python_abi=3.11
- pytz=2024.1
- rav1e=0.6.6
- readline=8.2
- scipy=1.13.0
- scyjava=1.9.1
- setuptools=69.2.0
- six=1.16.0
- snappy=1.1.10
- svt-av1=2.0.0
- tifffile=2024.2.12
- tk=8.6.13
- tzdata=2024a
- wheel=0.43.0
- xarray=2024.3.0
- xorg-libxau=1.0.11
- xorg-libxdmcp=1.1.3
- xz=5.2.6
- zfp=1.0.1
- zlib-ng=2.0.7
- zstd=1.5.5
prefix: /gpfs/exfel/sw/software/mambaforge/22.11/envs/pyimagej
7 changes: 7 additions & 0 deletions applications/imagej/environment.yml
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name: pyimagej
channels:
- nodefaults
- conda-forge
dependencies:
- pyimagej
- openjdk=8
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