v2.0.0
- An arbitrary number of spikein files, as gzipped fasta, can be used.
- No need to specify splice junction file in the input anymore, it is automatically generated.
- TALON updated to version v5.0.
- Added flagging of internal priming events using TALON subcommand
talon_label_reads
. - Complete refactoring of testing. Using pytest-workflow now, simplifying local test runs.
- WDL version 1.0.
- Resource specification simplified.