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EVA-3707 Add processor for excluding structural variants #171

EVA-3707 Add processor for excluding structural variants

EVA-3707 Add processor for excluding structural variants #171

Workflow file for this run

name: Run tests
on:
push:
branches: [ master ]
pull_request:
branches: [ master ]
jobs:
build:
runs-on: ubuntu-20.04
strategy:
matrix:
mongodb-version: [4.0.18]
java-version: [1.8]
steps:
- uses: actions/checkout@v2
- name: Setup Java JDK
uses: actions/[email protected]
# The Java version to make available on the path. Takes a whole or semver Java version, or 1.x syntax (e.g. 1.8 => Java 8.x). Early access versions can be specified in the form of e.g. 14-ea, 14.0.0-ea, or 14.0.0-ea.28
with:
java-version: ${{ matrix.java-version }}
- name: Install and Start MongoDB
run: |
wget http://fastdl.mongodb.org/linux/mongodb-linux-x86_64-${{ matrix.mongodb-version }}.tgz
tar xfz mongodb-linux-x86_64-${{ matrix.mongodb-version }}.tgz
export PATH=`pwd`/mongodb-linux-x86_64-${{ matrix.mongodb-version }}/bin:$PATH
mkdir -p data/db
mongod --dbpath=data/db &
mongod --version
- name: Run Maven tests
run: mvn test