Merge pull request #20 from sfarrens/format_fix

PyPi release

.gitignore

@@ -1,17 +1,138 @@
-# Ignore Python compilation
-*.pyc
+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
 
-# Ignore cache
-*.cache/
+# C extensions
+*.so
 
-# Ignore coverage tests
+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
 .coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+*.py,cover
+.hypothesis/
 .pytest_cache/
+cover/
 
-# Ignore installation
-.eggs/
-dist/
-build/
+# Translations
+*.mo
+*.pot
+
+# Django stuff:
+*.log
+local_settings.py
+db.sqlite3
+db.sqlite3-journal
+
+# Flask stuff:
+instance/
+.webassets-cache
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build/
+
+# PyBuilder
+.pybuilder/
+target/
+
+# Jupyter Notebook
+.ipynb_checkpoints
+
+# IPython
+profile_default/
+ipython_config.py
+
+# pyenv
+#   For a library or package, you might want to ignore these files since the code is
+#   intended to run in multiple environments; otherwise, check them in:
+# .python-version
+
+# pipenv
+#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
+#   However, in case of collaboration, if having platform-specific dependencies or dependencies
+#   having no cross-platform support, pipenv may install dependencies that don't work, or not
+#   install all needed dependencies.
+#Pipfile.lock
+
+# PEP 582; used by e.g. github.com/David-OConnor/pyflow
+__pypackages__/
+
+# Celery stuff
+celerybeat-schedule
+celerybeat.pid
+
+# SageMath parsed files
+*.sage.py
+
+# Environments
+.env
+.venv
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+.dmypy.json
+dmypy.json
+
+# Pyre type checker
+.pyre/
+
+# pytype static type analyzer
+.pytype/
 
-# Ignore pypi config
-.pypirc
+# Cython debug symbols
+cython_debug/

.travis.yml

@@ -2,10 +2,10 @@ language: python
 
 matrix:
     include:
-        - python: 3.5
         - python: 3.6
         - python: 3.7
-          dist: xenial
+        - python: 3.8
+          dist: focal
           sudo: true
 
 # GitHub branch
@@ -16,19 +16,19 @@ branches:
 # install package and dependencies
 install:
   - pip install scipy astropy
-  - pip install coverage nose pytest pytest-cov pytest-pep8
-  - if [[ $TRAVIS_PYTHON_VERSION == '3.6' ]]; then pip install sphinx sphinx-rtd-theme numpydoc travis-sphinx coveralls; fi
+  - pip install coverage nose pytest==5.4.3 pytest-cov pytest-pep8
+  - if [[ $TRAVIS_PYTHON_VERSION == '3.8' ]]; then pip install sphinx sphinx-rtd-theme numpydoc travis-sphinx coveralls; fi
 
 # run unit tests
 script:
   - python setup.py test
-  - if [[ $TRAVIS_PYTHON_VERSION == '3.6' ]]; then sphinx-apidoc -feo docs/source lenspack/; fi
-  - if [[ $TRAVIS_PYTHON_VERSION == '3.6' ]]; then travis-sphinx -v -o docs/build build -n -s docs/source; fi
+  - if [[ $TRAVIS_PYTHON_VERSION == '3.8' ]]; then sphinx-apidoc -feo docs/source lenspack/; fi
+  - if [[ $TRAVIS_PYTHON_VERSION == '3.8' ]]; then travis-sphinx -v -o docs/build build -n -s docs/source; fi
 
 # run coverage tests
 after_success:
-  - if [[ $TRAVIS_PYTHON_VERSION == '3.6' ]]; then coveralls; fi
-  - if [[ $TRAVIS_PYTHON_VERSION == '3.6' ]]; then travis-sphinx -o docs/build deploy; fi
+  - if [[ $TRAVIS_PYTHON_VERSION == '3.8' ]]; then coveralls; fi
+  - if [[ $TRAVIS_PYTHON_VERSION == '3.8' ]]; then travis-sphinx -o docs/build deploy; fi
 
 # notification settings
 notification:

MANIFEST.in

@@ -0,0 +1,2 @@
+include README.md
+include LICENSE.txt

README.md

@@ -7,9 +7,7 @@
 > Year: 2019  
 ---
 
-This repository is a collection of python codes useful for the weak-lensing
-analysis of galaxy catalogs and shear/convergence maps. The full documentation
-can be found [here](https://austinpeel.github.io/lenspack/index.html "lenspack documentation").
+This repository is a collection of python codes useful for the weak-lensing analysis of galaxy catalogs and shear/convergence maps. The full documentation can be found [here](https://austinpeel.github.io/lenspack/index.html "lenspack documentation").
 
 ## Contents
 
@@ -27,6 +25,15 @@ In progress.
 
 ## Installation
 
+### PyPi
+
+Install the latest release from PyPi.
+```
+$ pip install lenspack
+```
+
+### Local
+
 Clone this repository to your local machine. You might find it helpful to do this in a virtual environment in order to keep a clean workspace.
 ```
 $ git clone https://github.com/cosmostat/lenspack.git
@@ -72,10 +79,7 @@ fig.colorbar(mappable)
 plt.show()
 ```
 
-<p align="left">
-<img src="https://github.com/austinpeel/lenspack/blob/master/examples/figures/peaks.png" alt="peaks" width="400"/>
-</p>
-
+![peaks](./examples/figures/peaks.png)
 
 ### Wavelet transform
 
@@ -106,6 +110,4 @@ for ax in (ax1, ax2, ax3):
     ax.set_axis_off()
 ```
 
-<p align="left">
-<img src="https://github.com/austinpeel/lenspack/blob/master/examples/figures/wavelet_transform.png" alt="wavelet_transform" width="900"/>
-</p>
+![wavelet transfrom](./examples/figures/wavelet_transform.png)

lenspack/info.py

@@ -20,8 +20,8 @@
 
 # Default package properties
 __license__ = 'MIT'
-__about__ = ('{} \n\n Author: {} \n Email: {} \n Year: {} \n {} \n\n'
+__about__ = ('{} Author: {}, Email: {}, Year: {}, {}'
              ''.format(__name__, __author__, __email__, __year__,
                        __description__))
 __setup_requires__ = ['pytest-runner', ]
-__tests_require__ = ['pytest', 'pytest-cov', 'pytest-pep8']
+__tests_require__ = ['pytest==5.4.3', 'pytest-cov', 'pytest-pep8']