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38 changes: 30 additions & 8 deletions README.md
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# jax-lensing

[![arXiv:2011.08271](https://img.shields.io/badge/astro--ph.CO-arXiv%3A2011.08271-B31B1B.svg)](https://arxiv.org/abs/2011.08271) [![License](https://img.shields.io/pypi/l/jax-cosmo)](https://github.com/CosmoStat/jax-lensing/tree/master/LICENSE)<!-- ALL-CONTRIBUTORS-BADGE:START - Do not remove or modify this section -->
[![arXiv:2201.05561](https://img.shields.io/badge/astro--ph.CO-arXiv%3A2201.05561-B31B1B.svg)](https://arxiv.org/abs/2201.05561) [![License](https://img.shields.io/pypi/l/jax-cosmo)](https://github.com/CosmoStat/jax-lensing/tree/master/LICENSE)<!-- ALL-CONTRIBUTORS-BADGE:START - Do not remove or modify this section -->
[![All Contributors](https://img.shields.io/badge/all_contributors-4-orange.svg?style=flat-square)](#contributors-)
<!-- ALL-CONTRIBUTORS-BADGE:END -->
A JAX package for gravitational lensing

This repository contains scripts and notebook to reproduce the results from the following paper:
This repository contains scripts and notebook to reproduce the results from the
following paper:

[Probabilistic Mass-Mapping with Neural Score Estimation](https://arxiv.org/abs/2011.08271), B. Remy, F. Lanusse, N. Jeffrey, J. Liu, J.-L. Starck, K. Osato, T. Schrabback, submitted to Astronomy and Astrophisics, 2021.
B. Remy, F. Lanusse, N. Jeffrey, J. Liu, J.-L. Starck, K.
Osato, T. Schrabback,
[Probabilistic Mass-Mapping with Neural Score
Estimation](https://www.aanda.org/articles/aa/full_html/2023/04/aa43054-22/aa43054-22.html),
Astronomy & Astrophysics, 2023.

You will find all the scripts and instructions to reproduce traine models, sample maps and reproduce the paper figures [here](https://github.com/CosmoStat/jax-lensing/tree/master/papers/Remy2021).
You will find all the scripts and instructions to reproduce traine models, sample maps and reproduce the paper figures [here](https://github.com/CosmoStat/jax-lensing/tree/master/papers/Remy2021). All the results of the paper, including posterior samples and neural network weights, were stored in a [Zenodo record](https://zenodo.org/record/5825654).

This repository also contains implementation of the following methods:
- [`DeepLensingPosterior`](https://arxiv.org/abs/2011.08271)
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If you use `jax-lensing` in a scientific publication, we would appreciate citations to the following paper:

[Probabilistic Mass-Mapping with Neural Score Estimation](https://arxiv.org/abs/2011.08271), B. Remy, F. Lanusse, N. Jeffrey, J. Liu, J.-L. Starck, K. Osato, T. Schrabback, submitted to Astronomy and Astrophisics, 2021.
B. Remy, F. Lanusse, N. Jeffrey, J. Liu, J.-L. Starck, K. Osato, T. Schrabback,
[Probabilistic Mass-Mapping with Neural Score
Estimation](https://www.aanda.org/articles/aa/full_html/2023/04/aa43054-22/aa43054-22.html),
Astronomy & Astrophysics, 2023


The BibTeX citation is the following:
```
@Upcomming
@article{remy2023probabilistic,
title={Probabilistic mass-mapping with neural score estimation},
author={Remy, Benjamin and Lanusse, Francois and Jeffrey, Niall and Liu, Jia and Starck, J-L and Osato, Ken and Schrabback, Tim},
journal={Astronomy \& Astrophysics},
volume={672},
pages={A51},
year={2023},
publisher={EDP Sciences}
}
```

**Preliminary works**

- B. Remy, Z. Ramzi, F. Lanusse, J. Liu, J.-L. Starck. [Probabilistic Mapping of Dark Matter with Neural Score Matching](https://arxiv.org/abs/2011.08271), 3rd Machine Learning and the Physical Science workshop at
NeurIPS, 2020

- Z. Ramzi, B. Remy, F. Lanusse, J.-L. Starck, P. Ciuciu. [Denoising Score-Matching for Uncertainty Quantification in Inverse Problems](https://arxiv.org/abs/2011.08698), Deep inverse workshop at NeurIPS, 2020


## Contributors ✨

Thanks goes to these wonderful people ([emoji key](https://allcontributors.org/docs/en/emoji-key)):
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