Merge branch 'release/0.2.1'

README.md

@@ -36,6 +36,11 @@ your project.
 * `yarn install --pure-lockfile`
 * `bower install`
 
+To use the video capture facilities of Experimenter, you will also need to place the file `VideoRecorder.swf` 
+in your `<project_name>/public/` folder. **This file is not part of the git repository**; it is from the HDFVR flash video 
+recorder and must be obtained from a team member with access to the licensed version. They can also provide the
+necessary configuration to talk to a valid and licensed streaming media server (eg Wowza); see below.
+
 ### Install submodule dependencies
 
 ```bash

docs/build/html/.buildinfo

@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: f58f5a59839136cee8c51ccf32d00b2b
+config: 0ecd0d2eb66064ef901b849045cdb06c
 tags: 645f666f9bcd5a90fca523b33c5a78b7

docs/build/html/_static/basic.css

@@ -85,10 +85,6 @@ div.sphinxsidebar #searchbox input[type="text"] {
     width: 170px;
 }
 
-div.sphinxsidebar #searchbox input[type="submit"] {
-    width: 30px;
-}
-
 img {
     border: 0;
     max-width: 100%;
@@ -126,6 +122,8 @@ ul.keywordmatches li.goodmatch a {
 
 table.contentstable {
     width: 90%;
+    margin-left: auto;
+    margin-right: auto;
 }
 
 table.contentstable p.biglink {
@@ -153,9 +151,14 @@ table.indextable td {
     vertical-align: top;
 }
 
-table.indextable dl, table.indextable dd {
+table.indextable ul {
     margin-top: 0;
     margin-bottom: 0;
+    list-style-type: none;
+}
+
+table.indextable > tbody > tr > td > ul {
+    padding-left: 0em;
 }
 
 table.indextable tr.pcap {
@@ -187,6 +190,13 @@ div.genindex-jumpbox {
     padding: 0.4em;
 }
 
+/* -- domain module index --------------------------------------------------- */
+
+table.modindextable td {
+    padding: 2px;
+    border-collapse: collapse;
+}
+
 /* -- general body styles --------------------------------------------------- */
 
 div.body p, div.body dd, div.body li, div.body blockquote {
@@ -221,10 +231,6 @@ div.body td {
     text-align: left;
 }
 
-.field-list ul {
-    padding-left: 1em;
-}
-
 .first {
     margin-top: 0 !important;
 }
@@ -341,10 +347,6 @@ table.docutils td, table.docutils th {
     border-bottom: 1px solid #aaa;
 }
 
-table.field-list td, table.field-list th {
-    border: 0 !important;
-}
-
 table.footnote td, table.footnote th {
     border: 0 !important;
 }
@@ -381,6 +383,20 @@ div.figure p.caption span.caption-number {
 div.figure p.caption span.caption-text {
 }
 
+/* -- field list styles ----------------------------------------------------- */
+
+table.field-list td, table.field-list th {
+    border: 0 !important;
+}
+
+.field-list ul {
+    margin: 0;
+    padding-left: 1em;
+}
+
+.field-list p {
+    margin: 0;
+}
 
 /* -- other body styles ----------------------------------------------------- */
 
@@ -431,15 +447,6 @@ dl.glossary dt {
     font-size: 1.1em;
 }
 
-.field-list ul {
-    margin: 0;
-    padding-left: 1em;
-}
-
-.field-list p {
-    margin: 0;
-}
-
 .optional {
     font-size: 1.3em;
 }
@@ -498,6 +505,13 @@ pre {
     overflow-y: hidden;  /* fixes display issues on Chrome browsers */
 }
 
+span.pre {
+    -moz-hyphens: none;
+    -ms-hyphens: none;
+    -webkit-hyphens: none;
+    hyphens: none;
+}
+
 td.linenos pre {
     padding: 5px 0px;
     border: 0;
@@ -589,6 +603,16 @@ span.eqno {
     float: right;
 }
 
+span.eqno a.headerlink {
+    position: relative;
+    left: 0px;
+    z-index: 1;
+}
+
+div.math:hover a.headerlink {
+    visibility: visible;
+}
+
 /* -- printout stylesheet --------------------------------------------------- */
 
 @media print {

docs/build/html/_static/pygments.css

@@ -47,8 +47,10 @@
 .highlight .mh { color: #208050 } /* Literal.Number.Hex */
 .highlight .mi { color: #208050 } /* Literal.Number.Integer */
 .highlight .mo { color: #208050 } /* Literal.Number.Oct */
+.highlight .sa { color: #4070a0 } /* Literal.String.Affix */
 .highlight .sb { color: #4070a0 } /* Literal.String.Backtick */
 .highlight .sc { color: #4070a0 } /* Literal.String.Char */
+.highlight .dl { color: #4070a0 } /* Literal.String.Delimiter */
 .highlight .sd { color: #4070a0; font-style: italic } /* Literal.String.Doc */
 .highlight .s2 { color: #4070a0 } /* Literal.String.Double */
 .highlight .se { color: #4070a0; font-weight: bold } /* Literal.String.Escape */
@@ -59,7 +61,9 @@
 .highlight .s1 { color: #4070a0 } /* Literal.String.Single */
 .highlight .ss { color: #517918 } /* Literal.String.Symbol */
 .highlight .bp { color: #007020 } /* Name.Builtin.Pseudo */
+.highlight .fm { color: #06287e } /* Name.Function.Magic */
 .highlight .vc { color: #bb60d5 } /* Name.Variable.Class */
 .highlight .vg { color: #bb60d5 } /* Name.Variable.Global */
 .highlight .vi { color: #bb60d5 } /* Name.Variable.Instance */
+.highlight .vm { color: #bb60d5 } /* Name.Variable.Magic */
 .highlight .il { color: #208050 } /* Literal.Number.Integer.Long */

docs/build/html/_static/searchtools.js

@@ -226,6 +226,106 @@ var Scorer = {
 };
 
 
+
+
+
+var splitChars = (function() {
+    var result = {};
+    var singles = [96, 180, 187, 191, 215, 247, 749, 885, 903, 907, 909, 930, 1014, 1648,
+         1748, 1809, 2416, 2473, 2481, 2526, 2601, 2609, 2612, 2615, 2653, 2702,
+         2706, 2729, 2737, 2740, 2857, 2865, 2868, 2910, 2928, 2948, 2961, 2971,
+         2973, 3085, 3089, 3113, 3124, 3213, 3217, 3241, 3252, 3295, 3341, 3345,
+         3369, 3506, 3516, 3633, 3715, 3721, 3736, 3744, 3748, 3750, 3756, 3761,
+         3781, 3912, 4239, 4347, 4681, 4695, 4697, 4745, 4785, 4799, 4801, 4823,
+         4881, 5760, 5901, 5997, 6313, 7405, 8024, 8026, 8028, 8030, 8117, 8125,
+         8133, 8181, 8468, 8485, 8487, 8489, 8494, 8527, 11311, 11359, 11687, 11695,
+         11703, 11711, 11719, 11727, 11735, 12448, 12539, 43010, 43014, 43019, 43587,
+         43696, 43713, 64286, 64297, 64311, 64317, 64319, 64322, 64325, 65141];
+    var i, j, start, end;
+    for (i = 0; i < singles.length; i++) {
+        result[singles[i]] = true;
+    }
+    var ranges = [[0, 47], [58, 64], [91, 94], [123, 169], [171, 177], [182, 184], [706, 709],
+         [722, 735], [741, 747], [751, 879], [888, 889], [894, 901], [1154, 1161],
+         [1318, 1328], [1367, 1368], [1370, 1376], [1416, 1487], [1515, 1519], [1523, 1568],
+         [1611, 1631], [1642, 1645], [1750, 1764], [1767, 1773], [1789, 1790], [1792, 1807],
+         [1840, 1868], [1958, 1968], [1970, 1983], [2027, 2035], [2038, 2041], [2043, 2047],
+         [2070, 2073], [2075, 2083], [2085, 2087], [2089, 2307], [2362, 2364], [2366, 2383],
+         [2385, 2391], [2402, 2405], [2419, 2424], [2432, 2436], [2445, 2446], [2449, 2450],
+         [2483, 2485], [2490, 2492], [2494, 2509], [2511, 2523], [2530, 2533], [2546, 2547],
+         [2554, 2564], [2571, 2574], [2577, 2578], [2618, 2648], [2655, 2661], [2672, 2673],
+         [2677, 2692], [2746, 2748], [2750, 2767], [2769, 2783], [2786, 2789], [2800, 2820],
+         [2829, 2830], [2833, 2834], [2874, 2876], [2878, 2907], [2914, 2917], [2930, 2946],
+         [2955, 2957], [2966, 2968], [2976, 2978], [2981, 2983], [2987, 2989], [3002, 3023],
+         [3025, 3045], [3059, 3076], [3130, 3132], [3134, 3159], [3162, 3167], [3170, 3173],
+         [3184, 3191], [3199, 3204], [3258, 3260], [3262, 3293], [3298, 3301], [3312, 3332],
+         [3386, 3388], [3390, 3423], [3426, 3429], [3446, 3449], [3456, 3460], [3479, 3481],
+         [3518, 3519], [3527, 3584], [3636, 3647], [3655, 3663], [3674, 3712], [3717, 3718],
+         [3723, 3724], [3726, 3731], [3752, 3753], [3764, 3772], [3774, 3775], [3783, 3791],
+         [3802, 3803], [3806, 3839], [3841, 3871], [3892, 3903], [3949, 3975], [3980, 4095],
+         [4139, 4158], [4170, 4175], [4182, 4185], [4190, 4192], [4194, 4196], [4199, 4205],
+         [4209, 4212], [4226, 4237], [4250, 4255], [4294, 4303], [4349, 4351], [4686, 4687],
+         [4702, 4703], [4750, 4751], [4790, 4791], [4806, 4807], [4886, 4887], [4955, 4968],
+         [4989, 4991], [5008, 5023], [5109, 5120], [5741, 5742], [5787, 5791], [5867, 5869],
+         [5873, 5887], [5906, 5919], [5938, 5951], [5970, 5983], [6001, 6015], [6068, 6102],
+         [6104, 6107], [6109, 6111], [6122, 6127], [6138, 6159], [6170, 6175], [6264, 6271],
+         [6315, 6319], [6390, 6399], [6429, 6469], [6510, 6511], [6517, 6527], [6572, 6592],
+         [6600, 6607], [6619, 6655], [6679, 6687], [6741, 6783], [6794, 6799], [6810, 6822],
+         [6824, 6916], [6964, 6980], [6988, 6991], [7002, 7042], [7073, 7085], [7098, 7167],
+         [7204, 7231], [7242, 7244], [7294, 7400], [7410, 7423], [7616, 7679], [7958, 7959],
+         [7966, 7967], [8006, 8007], [8014, 8015], [8062, 8063], [8127, 8129], [8141, 8143],
+         [8148, 8149], [8156, 8159], [8173, 8177], [8189, 8303], [8306, 8307], [8314, 8318],
+         [8330, 8335], [8341, 8449], [8451, 8454], [8456, 8457], [8470, 8472], [8478, 8483],
+         [8506, 8507], [8512, 8516], [8522, 8525], [8586, 9311], [9372, 9449], [9472, 10101],
+         [10132, 11263], [11493, 11498], [11503, 11516], [11518, 11519], [11558, 11567],
+         [11622, 11630], [11632, 11647], [11671, 11679], [11743, 11822], [11824, 12292],
+         [12296, 12320], [12330, 12336], [12342, 12343], [12349, 12352], [12439, 12444],
+         [12544, 12548], [12590, 12592], [12687, 12689], [12694, 12703], [12728, 12783],
+         [12800, 12831], [12842, 12880], [12896, 12927], [12938, 12976], [12992, 13311],
+         [19894, 19967], [40908, 40959], [42125, 42191], [42238, 42239], [42509, 42511],
+         [42540, 42559], [42592, 42593], [42607, 42622], [42648, 42655], [42736, 42774],
+         [42784, 42785], [42889, 42890], [42893, 43002], [43043, 43055], [43062, 43071],
+         [43124, 43137], [43188, 43215], [43226, 43249], [43256, 43258], [43260, 43263],
+         [43302, 43311], [43335, 43359], [43389, 43395], [43443, 43470], [43482, 43519],
+         [43561, 43583], [43596, 43599], [43610, 43615], [43639, 43641], [43643, 43647],
+         [43698, 43700], [43703, 43704], [43710, 43711], [43715, 43738], [43742, 43967],
+         [44003, 44015], [44026, 44031], [55204, 55215], [55239, 55242], [55292, 55295],
+         [57344, 63743], [64046, 64047], [64110, 64111], [64218, 64255], [64263, 64274],
+         [64280, 64284], [64434, 64466], [64830, 64847], [64912, 64913], [64968, 65007],
+         [65020, 65135], [65277, 65295], [65306, 65312], [65339, 65344], [65371, 65381],
+         [65471, 65473], [65480, 65481], [65488, 65489], [65496, 65497]];
+    for (i = 0; i < ranges.length; i++) {
+        start = ranges[i][0];
+        end = ranges[i][1];
+        for (j = start; j <= end; j++) {
+            result[j] = true;
+        }
+    }
+    return result;
+})();
+
+function splitQuery(query) {
+    var result = [];
+    var start = -1;
+    for (var i = 0; i < query.length; i++) {
+        if (splitChars[query.charCodeAt(i)]) {
+            if (start !== -1) {
+                result.push(query.slice(start, i));
+                start = -1;
+            }
+        } else if (start === -1) {
+            start = i;
+        }
+    }
+    if (start !== -1) {
+        result.push(query.slice(start));
+    }
+    return result;
+}
+
+
+
+
 /**
  * Search Module
  */
@@ -324,7 +424,7 @@ var Search = {
     var searchterms = [];
     var excluded = [];
     var hlterms = [];
-    var tmp = query.split(/\s+/);
+    var tmp = splitQuery(query);
     var objectterms = [];
     for (i = 0; i < tmp.length; i++) {
       if (tmp[i] !== "") {
@@ -338,6 +438,10 @@ var Search = {
       }
       // stem the word
       var word = stemmer.stemWord(tmp[i].toLowerCase());
+      // prevent stemmer from cutting word smaller than two chars
+      if(word.length < 3 && tmp[i].length >= 3) {
+        word = tmp[i];
+      }
       var toAppend;
       // select the correct list
       if (word[0] == '-') {
@@ -435,7 +539,8 @@ var Search = {
             displayNextItem();
           });
         } else if (DOCUMENTATION_OPTIONS.HAS_SOURCE) {
-          $.ajax({url: DOCUMENTATION_OPTIONS.URL_ROOT + '_sources/' + item[0] + '.txt',
+          var suffix = DOCUMENTATION_OPTIONS.SOURCELINK_SUFFIX;
+          $.ajax({url: DOCUMENTATION_OPTIONS.URL_ROOT + '_sources/' + item[5] + (item[5].slice(-suffix.length) === suffix ? '' : suffix),
                   dataType: "text",
                   complete: function(jqxhr, textstatus) {
                     var data = jqxhr.responseText;
@@ -474,6 +579,7 @@ var Search = {
    */
   performObjectSearch : function(object, otherterms) {
     var filenames = this._index.filenames;
+    var docnames = this._index.docnames;
     var objects = this._index.objects;
     var objnames = this._index.objnames;
     var titles = this._index.titles;
@@ -527,7 +633,7 @@ var Search = {
           } else {
             score += Scorer.objPrioDefault;
           }
-          results.push([filenames[match[0]], fullname, '#'+anchor, descr, score]);
+          results.push([docnames[match[0]], fullname, '#'+anchor, descr, score, filenames[match[0]]]);
         }
       }
     }
@@ -539,6 +645,7 @@ var Search = {
    * search for full-text terms in the index
    */
   performTermsSearch : function(searchterms, excluded, terms, titleterms) {
+    var docnames = this._index.docnames;
     var filenames = this._index.filenames;
     var titles = this._index.titles;
 
@@ -613,7 +720,7 @@ var Search = {
         // select one (max) score for the file.
         // for better ranking, we should calculate ranking by using words statistics like basic tf-idf...
         var score = $u.max($u.map(fileMap[file], function(w){return scoreMap[file][w]}));
-        results.push([filenames[file], titles[file], '', null, score]);
+        results.push([docnames[file], titles[file], '', null, score, filenames[file]]);
       }
     }
     return results;