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Caltech-IPAC · Nov 2, 2018 · a6c99f3 · a6c99f3
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diff --git a/html/mAdd.html b/html/mAdd.html
@@ -11894,7 +11894,7 @@ <h2 id="mAdd-Example">mAdd Example<a class="anchor-link" href="#mAdd-Example">&#
 
 
 <div class="output_subarea output_stream output_stdout output_text">
-<pre>{&#39;status&#39;: &#39;0&#39;, &#39;time&#39;: 2.0}
+<pre>{&#39;status&#39;: &#39;0&#39;, &#39;time&#39;: 1.0}
 </pre>
 </div>
 </div>

diff --git a/html/mAddCube.html b/html/mAddCube.html
@@ -11882,7 +11882,7 @@ <h2 id="mAddCube-Example">mAddCube Example<a class="anchor-link" href="#mAddCube
 </div>
 <div class="cell border-box-sizing code_cell rendered">
 <div class="input">
-<div class="prompt input_prompt">In&nbsp;[2]:</div>
+<div class="prompt input_prompt">In&nbsp;[3]:</div>
 <div class="inner_cell">
     <div class="input_area">
 <div class=" highlight hl-ipython3"><pre><span></span><span class="n">rtn</span> <span class="o">=</span> <span class="n">mAddCube</span><span class="p">(</span><span class="s1">&#39;GALFA/projected&#39;</span><span class="p">,</span> 
@@ -11906,7 +11906,7 @@ <h2 id="mAddCube-Example">mAddCube Example<a class="anchor-link" href="#mAddCube
 
 
 <div class="output_subarea output_stream output_stdout output_text">
-<pre>{&#39;status&#39;: &#39;0&#39;, &#39;time&#39;: 159.0}
+<pre>{&#39;status&#39;: &#39;0&#39;, &#39;time&#39;: 143.0}
 </pre>
 </div>
 </div>

diff --git a/html/mArchiveGet.html b/html/mArchiveGet.html
@@ -11861,7 +11861,7 @@ <h2 id="mArchiveGet-Example">mArchiveGet Example<a class="anchor-link" href="#mA
 </div>
 <div class="cell border-box-sizing code_cell rendered">
 <div class="input">
-<div class="prompt input_prompt">In&nbsp;[2]:</div>
+<div class="prompt input_prompt">In&nbsp;[4]:</div>
 <div class="inner_cell">
     <div class="input_area">
 <div class=" highlight hl-ipython3"><pre><span></span><span class="n">rtn</span> <span class="o">=</span> <span class="n">mArchiveGet</span><span class="p">(</span><span class="s1">&#39;http://irsa.ipac.caltech.edu/ibe/data/twomass/full/full/990502s/s134/image/ji1340186.fits.gz&#39;</span><span class="p">,</span> 
@@ -11905,7 +11905,7 @@ <h2 id="Returned-Data">Returned Data<a class="anchor-link" href="#Returned-Data"
 </div>
 <div class="cell border-box-sizing code_cell rendered">
 <div class="input">
-<div class="prompt input_prompt">In&nbsp;[3]:</div>
+<div class="prompt input_prompt">In&nbsp;[5]:</div>
 <div class="inner_cell">
     <div class="input_area">
 <div class=" highlight hl-ipython3"><pre><span></span><span class="kn">from</span> <span class="nn">IPython.display</span> <span class="k">import</span> <span class="n">Image</span>
@@ -11927,7 +11927,7 @@ <h2 id="Returned-Data">Returned Data<a class="anchor-link" href="#Returned-Data"
 
 <div class="output_area">
 
-<div class="prompt output_prompt">Out[3]:</div>
+<div class="prompt output_prompt">Out[5]:</div>
 
 
 
@@ -11956,7 +11956,7 @@ <h2 id="mArchiveGet-Error-Handling">mArchiveGet Error Handling<a class="anchor-l
 </div>
 <div class="cell border-box-sizing code_cell rendered">
 <div class="input">
-<div class="prompt input_prompt">In&nbsp;[4]:</div>
+<div class="prompt input_prompt">In&nbsp;[6]:</div>
 <div class="inner_cell">
     <div class="input_area">
 <div class=" highlight hl-ipython3"><pre><span></span><span class="n">rtn</span> <span class="o">=</span> <span class="n">mArchiveGet</span><span class="p">(</span><span class="s1">&#39;http://unknown.edu/image/ji1340186.fits.gz&#39;</span><span class="p">,</span> 

diff --git a/html/mBackground.html b/html/mBackground.html
@@ -11912,12 +11912,12 @@ <h2 id="Before-and-After">Before and After<a class="anchor-link" href="#Before-a
 </div>
 <div class="cell border-box-sizing code_cell rendered">
 <div class="input">
-<div class="prompt input_prompt">In&nbsp;[3]:</div>
+<div class="prompt input_prompt">In&nbsp;[5]:</div>
 <div class="inner_cell">
     <div class="input_area">
 <div class=" highlight hl-ipython3"><pre><span></span><span class="kn">from</span> <span class="nn">IPython.display</span> <span class="k">import</span> <span class="n">display</span><span class="p">,</span> <span class="n">HTML</span>
 
-<span class="n">rtn</span> <span class="o">=</span> <span class="n">mViewer</span><span class="p">(</span><span class="s1">&#39;-ct 1 -gray input/corrected/hdu0_2mass-atlas-990502s-j1340186.fits </span><span class="se">\</span>
+<span class="n">rtn</span> <span class="o">=</span> <span class="n">mViewer</span><span class="p">(</span><span class="s1">&#39;-ct 1 -gray M17/corrected/hdu0_2mass-atlas-990502s-j1340186.fits </span><span class="se">\</span>
 <span class="s1">               -2s max gaussian-log -out work/M17/hdu0_2mass-atlas-990502s-j1340186.png&#39;</span><span class="p">,</span>
               <span class="s1">&#39;&#39;</span><span class="p">,</span> <span class="n">mode</span><span class="o">=</span><span class="mi">2</span><span class="p">)</span>
 
@@ -11968,7 +11968,7 @@ <h2 id="mBackground-Error-Handling">mBackground Error Handling<a class="anchor-l
 </div>
 <div class="cell border-box-sizing code_cell rendered">
 <div class="input">
-<div class="prompt input_prompt">In&nbsp;[4]:</div>
+<div class="prompt input_prompt">In&nbsp;[6]:</div>
 <div class="inner_cell">
     <div class="input_area">
 <div class=" highlight hl-ipython3"><pre><span></span><span class="n">rtn</span> <span class="o">=</span> <span class="n">mBackground</span><span class="p">(</span><span class="s1">&#39;M17/corrected/unknown.fits&#39;</span><span class="p">,</span> 

diff --git a/html/mBgExec.html b/html/mBgExec.html
@@ -11869,7 +11869,7 @@ <h2 id="mBgExec-Example">mBgExec Example<a class="anchor-link" href="#mBgExec-Ex
 </div>
 <div class="cell border-box-sizing code_cell rendered">
 <div class="input">
-<div class="prompt input_prompt">In&nbsp;[5]:</div>
+<div class="prompt input_prompt">In&nbsp;[3]:</div>
 <div class="inner_cell">
     <div class="input_area">
 <div class=" highlight hl-ipython3"><pre><span></span><span class="kn">from</span> <span class="nn">IPython.display</span> <span class="k">import</span> <span class="n">Image</span>
@@ -11892,7 +11892,7 @@ <h2 id="mBgExec-Example">mBgExec Example<a class="anchor-link" href="#mBgExec-Ex
 
 <div class="output_area">
 
-<div class="prompt output_prompt">Out[5]:</div>
+<div class="prompt output_prompt">Out[3]:</div>
 
 
 
@@ -11921,7 +11921,7 @@ <h2 id="mBgExec-Example">mBgExec Example<a class="anchor-link" href="#mBgExec-Ex
 </div>
 <div class="cell border-box-sizing code_cell rendered">
 <div class="input">
-<div class="prompt input_prompt">In&nbsp;[6]:</div>
+<div class="prompt input_prompt">In&nbsp;[4]:</div>
 <div class="inner_cell">
     <div class="input_area">
 <div class=" highlight hl-ipython3"><pre><span></span><span class="kn">import</span> <span class="nn">pandas</span> <span class="k">as</span> <span class="nn">pd</span>
@@ -11940,7 +11940,7 @@ <h2 id="mBgExec-Example">mBgExec Example<a class="anchor-link" href="#mBgExec-Ex
 
 <div class="output_area">
 
-<div class="prompt output_prompt">Out[6]:</div>
+<div class="prompt output_prompt">Out[4]:</div>
 
 
 
@@ -12336,7 +12336,7 @@ <h2 id="mBgExec-Example">mBgExec Example<a class="anchor-link" href="#mBgExec-Ex
 </div>
 <div class="cell border-box-sizing code_cell rendered">
 <div class="input">
-<div class="prompt input_prompt">In&nbsp;[8]:</div>
+<div class="prompt input_prompt">In&nbsp;[5]:</div>
 <div class="inner_cell">
     <div class="input_area">
 <div class=" highlight hl-ipython3"><pre><span></span><span class="n">rtn</span> <span class="o">=</span> <span class="n">mBgExec</span><span class="p">(</span><span class="s1">&#39;M17/projected&#39;</span><span class="p">,</span>
@@ -12381,7 +12381,7 @@ <h2 id="mBgExec-Example">mBgExec Example<a class="anchor-link" href="#mBgExec-Ex
 </div>
 <div class="cell border-box-sizing code_cell rendered">
 <div class="input">
-<div class="prompt input_prompt">In&nbsp;[9]:</div>
+<div class="prompt input_prompt">In&nbsp;[6]:</div>
 <div class="inner_cell">
     <div class="input_area">
 <div class=" highlight hl-ipython3"><pre><span></span><span class="n">mViewer</span><span class="p">(</span><span class="s1">&#39;-color black -imginfo M17/rimages.tbl </span><span class="se">\</span>
@@ -12402,7 +12402,7 @@ <h2 id="mBgExec-Example">mBgExec Example<a class="anchor-link" href="#mBgExec-Ex
 
 <div class="output_area">
 
-<div class="prompt output_prompt">Out[9]:</div>
+<div class="prompt output_prompt">Out[6]:</div>
 
 
 

diff --git a/html/mBgModel.html b/html/mBgModel.html
@@ -11794,7 +11794,7 @@ <h1 id="MontagePy.main-modules:-mBgModel">MontagePy.main modules: mBgModel<a cla
 </div>
 <div class="cell border-box-sizing code_cell rendered">
 <div class="input">
-<div class="prompt input_prompt">In&nbsp;[2]:</div>
+<div class="prompt input_prompt">In&nbsp;[1]:</div>
 <div class="inner_cell">
     <div class="input_area">
 <div class=" highlight hl-ipython3"><pre><span></span><span class="kn">from</span> <span class="nn">MontagePy.main</span> <span class="k">import</span> <span class="n">mBgModel</span><span class="p">,</span> <span class="n">mViewer</span>
@@ -11868,7 +11868,7 @@ <h2 id="mBgModel-Example">mBgModel Example<a class="anchor-link" href="#mBgModel
 </div>
 <div class="cell border-box-sizing code_cell rendered">
 <div class="input">
-<div class="prompt input_prompt">In&nbsp;[3]:</div>
+<div class="prompt input_prompt">In&nbsp;[2]:</div>
 <div class="inner_cell">
     <div class="input_area">
 <div class=" highlight hl-ipython3"><pre><span></span><span class="kn">import</span> <span class="nn">pandas</span> <span class="k">as</span> <span class="nn">pd</span>
@@ -11887,7 +11887,7 @@ <h2 id="mBgModel-Example">mBgModel Example<a class="anchor-link" href="#mBgModel
 
 <div class="output_area">
 
-<div class="prompt output_prompt">Out[3]:</div>
+<div class="prompt output_prompt">Out[2]:</div>
 
 
 
@@ -13359,7 +13359,7 @@ <h2 id="mBgModel-Example">mBgModel Example<a class="anchor-link" href="#mBgModel
 </div>
 <div class="cell border-box-sizing code_cell rendered">
 <div class="input">
-<div class="prompt input_prompt">In&nbsp;[4]:</div>
+<div class="prompt input_prompt">In&nbsp;[3]:</div>
 <div class="inner_cell">
     <div class="input_area">
 <div class=" highlight hl-ipython3"><pre><span></span><span class="n">rtn</span> <span class="o">=</span> <span class="n">mBgModel</span><span class="p">(</span><span class="s1">&#39;M17/pimages.tbl&#39;</span><span class="p">,</span> <span class="s1">&#39;M17/fits.tbl&#39;</span><span class="p">,</span> <span class="s1">&#39;work/M17/corrections.tbl&#39;</span><span class="p">)</span>
@@ -13392,7 +13392,7 @@ <h2 id="mBgModel-Example">mBgModel Example<a class="anchor-link" href="#mBgModel
 </div>
 <div class="cell border-box-sizing code_cell rendered">
 <div class="input">
-<div class="prompt input_prompt">In&nbsp;[5]:</div>
+<div class="prompt input_prompt">In&nbsp;[4]:</div>
 <div class="inner_cell">
     <div class="input_area">
 <div class=" highlight hl-ipython3"><pre><span></span><span class="n">ipactable</span> <span class="o">=</span> <span class="n">ascii</span><span class="o">.</span><span class="n">read</span><span class="p">(</span><span class="s1">&#39;work/M17/corrections.tbl&#39;</span><span class="p">)</span><span class="o">.</span><span class="n">to_pandas</span><span class="p">()</span>
@@ -13409,7 +13409,7 @@ <h2 id="mBgModel-Example">mBgModel Example<a class="anchor-link" href="#mBgModel
 
 <div class="output_area">
 
-<div class="prompt output_prompt">Out[5]:</div>
+<div class="prompt output_prompt">Out[4]:</div>
 
 
 
@@ -13806,7 +13806,7 @@ <h2 id="mBgModel-Error-Handling">mBgModel Error Handling<a class="anchor-link" h
 </div>
 <div class="cell border-box-sizing code_cell rendered">
 <div class="input">
-<div class="prompt input_prompt">In&nbsp;[6]:</div>
+<div class="prompt input_prompt">In&nbsp;[5]:</div>
 <div class="inner_cell">
     <div class="input_area">
 <div class=" highlight hl-ipython3"><pre><span></span><span class="n">rtn</span> <span class="o">=</span> <span class="n">mBgModel</span><span class="p">(</span><span class="s1">&#39;M17/unknown.tbl&#39;</span><span class="p">,</span> <span class="s1">&#39;M17/fits.tbl&#39;</span><span class="p">,</span> <span class="s1">&#39;work/M17/corrections.tbl&#39;</span><span class="p">)</span>

diff --git a/html/mCoverageCheck.html b/html/mCoverageCheck.html
diff --git a/html/mDiff.html b/html/mDiff.html
@@ -11794,7 +11794,7 @@ <h1 id="MontagePy.main-modules:-mDiff">MontagePy.main modules: mDiff<a class="an
 </div>
 <div class="cell border-box-sizing code_cell rendered">
 <div class="input">
-<div class="prompt input_prompt">In&nbsp;[2]:</div>
+<div class="prompt input_prompt">In&nbsp;[1]:</div>
 <div class="inner_cell">
     <div class="input_area">
 <div class=" highlight hl-ipython3"><pre><span></span><span class="kn">from</span> <span class="nn">MontagePy.main</span> <span class="k">import</span> <span class="n">mDiff</span><span class="p">,</span> <span class="n">mViewer</span>
@@ -11870,16 +11870,16 @@ <h1 id="MontagePy.main-modules:-mDiff">MontagePy.main modules: mDiff<a class="an
 <div class="text_cell_render border-box-sizing rendered_html">
 <h2 id="mDiff-Example">mDiff Example<a class="anchor-link" href="#mDiff-Example">&#182;</a></h2><p>Here, two Spitzer Space Telescope IRAC images have been tranformed to a common projection (using mProject).  They have similar but not identical sky coverage and originally had slightly different rotations.</p>
 <div style="width: 820px">
-<img src="input/IRAC/projected/SPITZER_I2_5504000_0000_6_E8758134_maic.png" width="400" style="float: left;"/>
-<img src="input/IRAC/projected/SPITZER_I2_5504256_0000_6_E8757228_maic.png" width="400" style="float: right;"/>
+<img src="IRAC/projected/SPITZER_I2_5504000_0000_6_E8758134_maic.png" width="400" style="float: left;"/>
+<img src="IRAC/projected/SPITZER_I2_5504256_0000_6_E8757228_maic.png" width="400" style="float: right;"/>
 </div><p>mDiff gives us the difference image of the above two.  In Montage, this difference is primarily used to determine background offsets by fitting the difference with a plane.  Below we stretch the difference to show the noise level and illustrate any residual effects of sky structure.  Most noticeble are the bright stars in the lower left and the brightest areas in the galaxies, particularly the center of M51b. However, these are not much brighter than the noise and instrumental data collection effects, so fitting the difference with a plane (mFitplane) gives an reasonable measure of the image background difference, especially if the larger excursions from the plane are excluded in the fit.</p>
 <p/>
 </div>
 </div>
 </div>
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-<div class="prompt input_prompt">In&nbsp;[4]:</div>
+<div class="prompt input_prompt">In&nbsp;[2]:</div>
 <div class="inner_cell">
     <div class="input_area">
 <div class=" highlight hl-ipython3"><pre><span></span><span class="n">rtn</span> <span class="o">=</span> <span class="n">mDiff</span><span class="p">(</span><span class="s1">&#39;IRAC/projected/hdu0_SPITZER_I2_5504000_0000_6_E8758134_maic.fits&#39;</span><span class="p">,</span> 
@@ -11904,7 +11904,7 @@ <h2 id="mDiff-Example">mDiff Example<a class="anchor-link" href="#mDiff-Example"
 
 
 <div class="output_subarea output_stream output_stdout output_text">
-<pre>{&#39;status&#39;: &#39;0&#39;, &#39;time&#39;: 0.0, &#39;min_pixel&#39;: -0.33841609954833984, &#39;max_pixel&#39;: 269.2658386230469, &#39;min_diff&#39;: 1.4901161193847656e-08, &#39;max_diff&#39;: 142.27021026611328}
+<pre>{&#39;status&#39;: &#39;0&#39;, &#39;time&#39;: 1.0, &#39;min_pixel&#39;: -0.33841609954833984, &#39;max_pixel&#39;: 269.2658386230469, &#39;min_diff&#39;: 1.4901161193847656e-08, &#39;max_diff&#39;: 142.27021026611328}
 </pre>
 </div>
 </div>
@@ -11925,7 +11925,7 @@ <h2 id="mDiff-Example">mDiff Example<a class="anchor-link" href="#mDiff-Example"
 </div>
 <div class="cell border-box-sizing code_cell rendered">
 <div class="input">
-<div class="prompt input_prompt">In&nbsp;[6]:</div>
+<div class="prompt input_prompt">In&nbsp;[3]:</div>
 <div class="inner_cell">
     <div class="input_area">
 <div class=" highlight hl-ipython3"><pre><span></span><span class="kn">from</span> <span class="nn">IPython.display</span> <span class="k">import</span> <span class="n">Image</span>
@@ -11947,7 +11947,7 @@ <h2 id="mDiff-Example">mDiff Example<a class="anchor-link" href="#mDiff-Example"
 
 <div class="output_area">
 
-<div class="prompt output_prompt">Out[6]:</div>
+<div class="prompt output_prompt">Out[3]:</div>
 
 
 
@@ -11977,7 +11977,7 @@ <h2 id="mDiff-Error-Handling">mDiff Error Handling<a class="anchor-link" href="#
 </div>
 <div class="cell border-box-sizing code_cell rendered">
 <div class="input">
-<div class="prompt input_prompt">In&nbsp;[8]:</div>
+<div class="prompt input_prompt">In&nbsp;[4]:</div>
 <div class="inner_cell">
     <div class="input_area">
 <div class=" highlight hl-ipython3"><pre><span></span><span class="n">rtn</span> <span class="o">=</span> <span class="n">mDiff</span><span class="p">(</span><span class="s1">&#39;IRAC/projected/unknown.fits&#39;</span><span class="p">,</span> 

diff --git a/html/mDiffExec.html b/html/mDiffExec.html
@@ -11915,7 +11915,7 @@ <h2 id="mDiffExec-Example">mDiffExec Example<a class="anchor-link" href="#mDiffE
 </div>
 <div class="cell border-box-sizing code_cell rendered">
 <div class="input">
-<div class="prompt input_prompt">In&nbsp;[14]:</div>
+<div class="prompt input_prompt">In&nbsp;[4]:</div>
 <div class="inner_cell">
     <div class="input_area">
 <div class=" highlight hl-ipython3"><pre><span></span><span class="kn">from</span> <span class="nn">IPython.display</span> <span class="k">import</span> <span class="n">HTML</span><span class="p">,</span> <span class="n">display</span><span class="p">,</span> <span class="n">Image</span>
@@ -11965,7 +11965,7 @@ <h2 id="mDiffExec-Example">mDiffExec Example<a class="anchor-link" href="#mDiffE
 </div>
 <div class="cell border-box-sizing code_cell rendered">
 <div class="input">
-<div class="prompt input_prompt">In&nbsp;[21]:</div>
+<div class="prompt input_prompt">In&nbsp;[5]:</div>
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     <div class="input_area">
 <div class=" highlight hl-ipython3"><pre><span></span><span class="n">rtn</span> <span class="o">=</span> <span class="n">mViewer</span><span class="p">(</span><span class="s2">&quot;-color yellow -imginfo M17/pimages.tbl </span><span class="se">\</span>
@@ -11987,7 +11987,7 @@ <h2 id="mDiffExec-Example">mDiffExec Example<a class="anchor-link" href="#mDiffE
 
 <div class="output_area">
 
-<div class="prompt output_prompt">Out[21]:</div>
+<div class="prompt output_prompt">Out[5]:</div>
-Original file line number
+Diff line change
@@ Expand Up @@
     <div class="output_subarea output_stream output_stdout output_text">
-    <pre>{&#39;status&#39;: &#39;0&#39;, &#39;time&#39;: 2.0}
+    <pre>{&#39;status&#39;: &#39;0&#39;, &#39;time&#39;: 1.0}
     </pre>
     </div>
     </div>
@@ Expand Down @@