Pytest #21

	name: Pytest

	on:
	workflow_dispatch:

	jobs:
	build:
	runs-on: ubuntu-latest
	strategy:
	matrix:
	python-version: ["3.10"]
	steps:
	- uses: actions/checkout@v3
	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v4
	with:
	python-version: ${{ matrix.python-version }}
	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	pip install ruff pytest
	if [ -f convertPheno_server/requirements.txt ];
	then pip install -r convertPheno_server/requirements.txt; fi
	- name: Lint with ruff
	run: \|
	# stop the build if there are Python syntax errors or undefined names
	ruff -- --format=github --select=E9,F63,F7,F82 --target-version=py37 .
	# default set of ruff rules with GitHub Annotations
	ruff -- --format=github --target-version=py37 .
	- name: Test with pytest
	run: \|
	echo "" > convertPheno_server/.env
	make -C convertPheno_server unit-test
	- name: Upload coverage reports to Codecov
	uses: codecov/codecov-action@v3
	with:
	files: ./convertPheno_server/tests/reports/coverage/coverage.xml

Provide feedback