20 consider including and consuming the qc documentation from dv.templates

.github/workflows/test.yml

@@ -33,6 +33,33 @@ jobs:
             inst/validation
           path: templates
 
+      - name: Overwrite quality control scripts with dv.templates ones 🧹
+        run: |
+          # Paths to the directories
+          TEMPLATE_DIR="templates/inst/validation"
+          REPO_DIR="inst/validation"
+
+          # Run the diff command and capture the output
+          DIFF_OUTPUT=$(diff -qr "$TEMPLATE_DIR" "$REPO_DIR")
+
+          echo "# Quality control files" | tee -a $GITHUB_STEP_SUMMARY
+
+          # Check if the diff command found any differences
+          if [ -n "$DIFF_OUTPUT" ]; then
+            echo "Warning: The contents of the directories are different!" | tee -a $GITHUB_STEP_SUMMARY
+            echo "Modified files:" | tee -a $GITHUB_STEP_SUMMARY
+            echo "$DIFF_OUTPUT" | tee -a $GITHUB_STEP_SUMMARY
+          else
+            echo "The directories are identical." | tee -a $GITHUB_STEP_SUMMARY
+          fi
+
+          # Always overwrite
+
+          rm -rf "$REPO_DIR"/*
+
+          # Move contents of REPO_DIR to TEMPLATE_DIR
+          mv "$TEMPLATE_DIR"/* "$REPO_DIR"
+
       - name: Install package dependencies 📄
         uses: boehringer-ingelheim/dv.templates/.github/actions/dependencies@main