version++ to v1.4.2; render docs

BioLockJ-Dev-Team · Mar 23, 2022 · a84c5eb · a84c5eb
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diff --git a/.version b/.version
@@ -1 +1 @@
-v1.4.2-dev
+v1.4.2
diff --git a/docs/GENERATED/BioLockJ-Api/index.html b/docs/GENERATED/BioLockJ-Api/index.html
@@ -219,7 +219,7 @@ <h1 id="biolockj-api">BioLockJ API<a class="headerlink" href="#biolockj-api" tit
 <p>BioLockJ comes with an API.                                      </p>
 <p>For the most up-to-date information about how to use the API, see the help menu:                                      </p>
 <p><code>biolockj-api help</code>                   </p>
-<pre><code>BioLockJ API v1.4.1 - UNCC Fodor Lab                   
+<pre><code>BioLockJ API v1.4.2 - UNCC Fodor Lab                   
 
 Usage:                   
 (bash)                   

diff --git a/docs/GENERATED/biolockj-help/index.html b/docs/GENERATED/biolockj-help/index.html
@@ -217,7 +217,7 @@
 </code></pre>
 
 <pre><code class="bash">
-BioLockJ v1.4.1 - UNCC Fodor Lab 2021                   
+BioLockJ v1.4.2 - UNCC Fodor Lab 2021                   
 Usage:                   
 (bash)                   
 biolockj [options] &lt;config|pipeline&gt;                   

diff --git a/docs/GENERATED/biolockj.module.assembly/GenomeAssembly/index.html b/docs/GENERATED/biolockj.module.assembly/GenomeAssembly/index.html
@@ -306,7 +306,7 @@ <h2 id="citation">Citation<a class="headerlink" href="#citation" title="Permanen
 PRODIGAL                 <br />
 https://github.com/hyattpd/Prodigal/releases/download/v2.6.3/prodigal.linux                   </p>
 <p>Module developed by Shan Sun                 <br />
-BioLockJ v1.4.1</p>
+BioLockJ v1.4.2</p>
 
             </div>
           </div>

diff --git a/docs/GENERATED/biolockj.module.diversity/ShannonDiversity/index.html b/docs/GENERATED/biolockj.module.diversity/ShannonDiversity/index.html
@@ -283,7 +283,7 @@ <h2 id="adds-modules">Adds modules<a class="headerlink" href="#adds-modules" tit
 <em>none found</em>                   </p>
 <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link">#</a></h2>
 <p>If running in docker, this module will run in a docker container from this image:<br></p>
-<pre><code>biolockjdevteam/biolockj_controller:v1.4.1
+<pre><code>biolockjdevteam/biolockj_controller:v1.4.2
 </code></pre>
 
 <p>This can be modified using the following properties:<br>

diff --git a/docs/GENERATED/biolockj.module.diy/Rmarkdown/index.html b/docs/GENERATED/biolockj.module.diy/Rmarkdown/index.html
@@ -313,7 +313,7 @@ <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link
 <code>Rmarkdown.imageTag</code><br></p>
 <h2 id="citation">Citation<a class="headerlink" href="#citation" title="Permanent link">#</a></h2>
 <p>Module created by Ivory Blakley                 <br />
-BioLockJ v1.4.1</p>
+BioLockJ v1.4.2</p>
 
             </div>
           </div>

diff --git a/docs/GENERATED/biolockj.module.getData.sra/SraMetaDB/index.html b/docs/GENERATED/biolockj.module.getData.sra/SraMetaDB/index.html
@@ -321,7 +321,7 @@ <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link
 <code>SraMetaDB.imageTag</code><br></p>
 <h2 id="citation">Citation<a class="headerlink" href="#citation" title="Permanent link">#</a></h2>
 <p>Module developed by Malcolm Zapatas and Ivory Blakley                 <br />
-BioLockJ v1.4.1</p>
+BioLockJ v1.4.2</p>
 
             </div>
           </div>

diff --git a/docs/GENERATED/biolockj.module.getData.sra/SraMetaData/index.html b/docs/GENERATED/biolockj.module.getData.sra/SraMetaData/index.html
@@ -313,7 +313,7 @@ <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link
 <code>SraMetaData.imageTag</code><br></p>
 <h2 id="citation">Citation<a class="headerlink" href="#citation" title="Permanent link">#</a></h2>
 <p>Module developed by Malcolm Zapatas and Ivory Blakley                 <br />
-BioLockJ v1.4.1</p>
+BioLockJ v1.4.2</p>
 
             </div>
           </div>

diff --git a/docs/GENERATED/biolockj.module.getData.sra/SrpSrrConverter/index.html b/docs/GENERATED/biolockj.module.getData.sra/SrpSrrConverter/index.html
@@ -318,7 +318,7 @@ <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link
 <code>SrpSrrConverter.imageTag</code><br></p>
 <h2 id="citation">Citation<a class="headerlink" href="#citation" title="Permanent link">#</a></h2>
 <p>Module developed by Malcolm Zapatas and Ivory Blakley                 <br />
-BioLockJ v1.4.1</p>
+BioLockJ v1.4.2</p>
 
             </div>
           </div>

diff --git a/docs/GENERATED/biolockj.module.hello_world/Hello_World/index.html b/docs/GENERATED/biolockj.module.hello_world/Hello_World/index.html
@@ -292,7 +292,7 @@ <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link
 <code>Hello_World.imageTag</code><br></p>
 <h2 id="citation">Citation<a class="headerlink" href="#citation" title="Permanent link">#</a></h2>
 <p>Module developed by Ivory Blakley.                 <br />
-BioLockJ v1.4.1</p>
+BioLockJ v1.4.2</p>
 
             </div>
           </div>

diff --git a/docs/GENERATED/biolockj.module.implicit.parser.r16s/QiimeParser/index.html b/docs/GENERATED/biolockj.module.implicit.parser.r16s/QiimeParser/index.html
@@ -218,7 +218,7 @@ <h2 id="adds-modules">Adds modules<a class="headerlink" href="#adds-modules" tit
 <em>none found</em>                   </p>
 <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link">#</a></h2>
 <p>If running in docker, this module will run in a docker container from this image:<br></p>
-<pre><code>biolockjdevteam/biolockj_controller:v1.4.1
+<pre><code>biolockjdevteam/biolockj_controller:v1.4.2
 </code></pre>
 
 <p>This can be modified using the following properties:<br>

diff --git a/docs/GENERATED/biolockj.module.implicit.parser.r16s/RdpHierParser/index.html b/docs/GENERATED/biolockj.module.implicit.parser.r16s/RdpHierParser/index.html
@@ -300,7 +300,7 @@ <h2 id="adds-modules">Adds modules<a class="headerlink" href="#adds-modules" tit
 <em>none found</em>                   </p>
 <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link">#</a></h2>
 <p>If running in docker, this module will run in a docker container from this image:<br></p>
-<pre><code>biolockjdevteam/biolockj_controller:v1.4.1
+<pre><code>biolockjdevteam/biolockj_controller:v1.4.2
 </code></pre>
 
 <p>This can be modified using the following properties:<br>

diff --git a/docs/GENERATED/biolockj.module.implicit.parser.r16s/RdpParser/index.html b/docs/GENERATED/biolockj.module.implicit.parser.r16s/RdpParser/index.html
@@ -304,7 +304,7 @@ <h2 id="adds-modules">Adds modules<a class="headerlink" href="#adds-modules" tit
 <em>none found</em>                   </p>
 <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link">#</a></h2>
 <p>If running in docker, this module will run in a docker container from this image:<br></p>
-<pre><code>biolockjdevteam/biolockj_controller:v1.4.1
+<pre><code>biolockjdevteam/biolockj_controller:v1.4.2
 </code></pre>
 
 <p>This can be modified using the following properties:<br>

diff --git a/docs/GENERATED/biolockj.module.implicit.parser.wgs/Humann2Parser/index.html b/docs/GENERATED/biolockj.module.implicit.parser.wgs/Humann2Parser/index.html
@@ -308,7 +308,7 @@ <h2 id="adds-modules">Adds modules<a class="headerlink" href="#adds-modules" tit
 <em>none found</em>                   </p>
 <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link">#</a></h2>
 <p>If running in docker, this module will run in a docker container from this image:<br></p>
-<pre><code>biolockjdevteam/biolockj_controller:v1.4.1
+<pre><code>biolockjdevteam/biolockj_controller:v1.4.2
 </code></pre>
 
 <p>This can be modified using the following properties:<br>
@@ -317,7 +317,7 @@ <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link
 <code>Humann2Parser.imageTag</code><br></p>
 <h2 id="citation">Citation<a class="headerlink" href="#citation" title="Permanent link">#</a></h2>
 <p>Module developed by Mike Sioda                 <br />
-BioLockJ v1.4.1</p>
+BioLockJ v1.4.2</p>
 
             </div>
           </div>

diff --git a/docs/GENERATED/biolockj.module.implicit.parser.wgs/Kraken2Parser/index.html b/docs/GENERATED/biolockj.module.implicit.parser.wgs/Kraken2Parser/index.html
@@ -291,7 +291,7 @@ <h2 id="adds-modules">Adds modules<a class="headerlink" href="#adds-modules" tit
 <em>none found</em>                   </p>
 <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link">#</a></h2>
 <p>If running in docker, this module will run in a docker container from this image:<br></p>
-<pre><code>biolockjdevteam/biolockj_controller:v1.4.1
+<pre><code>biolockjdevteam/biolockj_controller:v1.4.2
 </code></pre>
 
 <p>This can be modified using the following properties:<br>
@@ -300,7 +300,7 @@ <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link
 <code>Kraken2Parser.imageTag</code><br></p>
 <h2 id="citation">Citation<a class="headerlink" href="#citation" title="Permanent link">#</a></h2>
 <p>Module developed by Mike Sioda                 <br />
-BioLockJ v1.4.1</p>
+BioLockJ v1.4.2</p>
 
             </div>
           </div>

diff --git a/docs/GENERATED/biolockj.module.implicit.parser.wgs/KrakenParser/index.html b/docs/GENERATED/biolockj.module.implicit.parser.wgs/KrakenParser/index.html
@@ -291,7 +291,7 @@ <h2 id="adds-modules">Adds modules<a class="headerlink" href="#adds-modules" tit
 <em>none found</em>                   </p>
 <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link">#</a></h2>
 <p>If running in docker, this module will run in a docker container from this image:<br></p>
-<pre><code>biolockjdevteam/biolockj_controller:v1.4.1
+<pre><code>biolockjdevteam/biolockj_controller:v1.4.2
 </code></pre>
 
 <p>This can be modified using the following properties:<br>
@@ -300,7 +300,7 @@ <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link
 <code>KrakenParser.imageTag</code><br></p>
 <h2 id="citation">Citation<a class="headerlink" href="#citation" title="Permanent link">#</a></h2>
 <p>Module developed by Mike Sioda                 <br />
-BioLockJ v1.4.1</p>
+BioLockJ v1.4.2</p>
 
             </div>
           </div>

diff --git a/docs/GENERATED/biolockj.module.implicit.parser.wgs/Metaphlan2Parser/index.html b/docs/GENERATED/biolockj.module.implicit.parser.wgs/Metaphlan2Parser/index.html
@@ -218,7 +218,7 @@ <h2 id="adds-modules">Adds modules<a class="headerlink" href="#adds-modules" tit
 <em>none found</em>                   </p>
 <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link">#</a></h2>
 <p>If running in docker, this module will run in a docker container from this image:<br></p>
-<pre><code>biolockjdevteam/biolockj_controller:v1.4.1
+<pre><code>biolockjdevteam/biolockj_controller:v1.4.2
 </code></pre>
 
 <p>This can be modified using the following properties:<br>

diff --git a/docs/GENERATED/biolockj.module.implicit/Demultiplexer/index.html b/docs/GENERATED/biolockj.module.implicit/Demultiplexer/index.html
@@ -410,7 +410,7 @@ <h2 id="adds-modules">Adds modules<a class="headerlink" href="#adds-modules" tit
 <em>none found</em>                   </p>
 <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link">#</a></h2>
 <p>If running in docker, this module will run in a docker container from this image:<br></p>
-<pre><code>biolockjdevteam/biolockj_controller:v1.4.1
+<pre><code>biolockjdevteam/biolockj_controller:v1.4.2
 </code></pre>
 
 <p>This can be modified using the following properties:<br>
@@ -419,7 +419,7 @@ <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link
 <code>Demultiplexer.imageTag</code><br></p>
 <h2 id="citation">Citation<a class="headerlink" href="#citation" title="Permanent link">#</a></h2>
 <p>Module developed by Mike Sioda                 <br />
-BioLockJ v1.4.1</p>
+BioLockJ v1.4.2</p>
 
             </div>
           </div>

diff --git a/docs/GENERATED/biolockj.module.implicit/ImportMetadata/index.html b/docs/GENERATED/biolockj.module.implicit/ImportMetadata/index.html
@@ -257,7 +257,7 @@ <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link
 <code>ImportMetadata.imageTag</code><br></p>
 <h2 id="citation">Citation<a class="headerlink" href="#citation" title="Permanent link">#</a></h2>
 <p>Module developed by Mike Sioda                 <br />
-BioLockJ v1.4.1</p>
+BioLockJ v1.4.2</p>
 
             </div>
           </div>

diff --git a/docs/GENERATED/biolockj.module.implicit/RegisterNumReads/index.html b/docs/GENERATED/biolockj.module.implicit/RegisterNumReads/index.html
@@ -218,7 +218,7 @@ <h2 id="adds-modules">Adds modules<a class="headerlink" href="#adds-modules" tit
 <em>none found</em>                   </p>
 <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link">#</a></h2>
 <p>If running in docker, this module will run in a docker container from this image:<br></p>
-<pre><code>biolockjdevteam/biolockj_controller:v1.4.1
+<pre><code>biolockjdevteam/biolockj_controller:v1.4.2
 </code></pre>
 
 <p>This can be modified using the following properties:<br>

diff --git a/docs/GENERATED/biolockj.module.report.humann2/AddMetadataToPathwayTables/index.html b/docs/GENERATED/biolockj.module.report.humann2/AddMetadataToPathwayTables/index.html
@@ -218,7 +218,7 @@ <h2 id="adds-modules">Adds modules<a class="headerlink" href="#adds-modules" tit
 <em>none found</em>                   </p>
 <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link">#</a></h2>
 <p>If running in docker, this module will run in a docker container from this image:<br></p>
-<pre><code>biolockjdevteam/biolockj_controller:v1.4.1
+<pre><code>biolockjdevteam/biolockj_controller:v1.4.2
 </code></pre>
 
 <p>This can be modified using the following properties:<br>

diff --git a/docs/GENERATED/biolockj.module.report.humann2/RemoveLowPathwayCounts/index.html b/docs/GENERATED/biolockj.module.report.humann2/RemoveLowPathwayCounts/index.html
@@ -218,7 +218,7 @@ <h2 id="adds-modules">Adds modules<a class="headerlink" href="#adds-modules" tit
 <em>none found</em>                   </p>
 <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link">#</a></h2>
 <p>If running in docker, this module will run in a docker container from this image:<br></p>
-<pre><code>biolockjdevteam/biolockj_controller:v1.4.1
+<pre><code>biolockjdevteam/biolockj_controller:v1.4.2
 </code></pre>
 
 <p>This can be modified using the following properties:<br>

diff --git a/docs/GENERATED/biolockj.module.report.humann2/RemoveScarcePathwayCounts/index.html b/docs/GENERATED/biolockj.module.report.humann2/RemoveScarcePathwayCounts/index.html
@@ -218,7 +218,7 @@ <h2 id="adds-modules">Adds modules<a class="headerlink" href="#adds-modules" tit
 <em>none found</em>                   </p>
 <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link">#</a></h2>
 <p>If running in docker, this module will run in a docker container from this image:<br></p>
-<pre><code>biolockjdevteam/biolockj_controller:v1.4.1
+<pre><code>biolockjdevteam/biolockj_controller:v1.4.2
 </code></pre>
 
 <p>This can be modified using the following properties:<br>

diff --git a/docs/GENERATED/biolockj.module.report.otu/CompileOtuCounts/index.html b/docs/GENERATED/biolockj.module.report.otu/CompileOtuCounts/index.html
@@ -218,7 +218,7 @@ <h2 id="adds-modules">Adds modules<a class="headerlink" href="#adds-modules" tit
 <em>none found</em>                   </p>
 <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link">#</a></h2>
 <p>If running in docker, this module will run in a docker container from this image:<br></p>
-<pre><code>biolockjdevteam/biolockj_controller:v1.4.1
+<pre><code>biolockjdevteam/biolockj_controller:v1.4.2
 </code></pre>
 
 <p>This can be modified using the following properties:<br>

diff --git a/docs/GENERATED/biolockj.module.report.otu/RarefyOtuCounts/index.html b/docs/GENERATED/biolockj.module.report.otu/RarefyOtuCounts/index.html
@@ -308,7 +308,7 @@ <h2 id="adds-modules">Adds modules<a class="headerlink" href="#adds-modules" tit
 <em>none found</em>                   </p>
 <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link">#</a></h2>
 <p>If running in docker, this module will run in a docker container from this image:<br></p>
-<pre><code>biolockjdevteam/biolockj_controller:v1.4.1
+<pre><code>biolockjdevteam/biolockj_controller:v1.4.2
 </code></pre>
 
 <p>This can be modified using the following properties:<br>
@@ -317,7 +317,7 @@ <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link
 <code>RarefyOtuCounts.imageTag</code><br></p>
 <h2 id="citation">Citation<a class="headerlink" href="#citation" title="Permanent link">#</a></h2>
 <p>Module developed by Mike Sioda                 <br />
-BioLockJ v1.4.1</p>
+BioLockJ v1.4.2</p>
 
             </div>
           </div>

diff --git a/docs/GENERATED/biolockj.module.report.otu/RemoveLowOtuCounts/index.html b/docs/GENERATED/biolockj.module.report.otu/RemoveLowOtuCounts/index.html
@@ -283,7 +283,7 @@ <h2 id="adds-modules">Adds modules<a class="headerlink" href="#adds-modules" tit
 <em>none found</em>                   </p>
 <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link">#</a></h2>
 <p>If running in docker, this module will run in a docker container from this image:<br></p>
-<pre><code>biolockjdevteam/biolockj_controller:v1.4.1
+<pre><code>biolockjdevteam/biolockj_controller:v1.4.2
 </code></pre>
 
 <p>This can be modified using the following properties:<br>
@@ -292,7 +292,7 @@ <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link
 <code>RemoveLowOtuCounts.imageTag</code><br></p>
 <h2 id="citation">Citation<a class="headerlink" href="#citation" title="Permanent link">#</a></h2>
 <p>Module developed by Mike Sioda                 <br />
-BioLockJ v1.4.1</p>
+BioLockJ v1.4.2</p>
 
             </div>
           </div>

diff --git a/docs/GENERATED/biolockj.module.report.otu/RemoveScarceOtuCounts/index.html b/docs/GENERATED/biolockj.module.report.otu/RemoveScarceOtuCounts/index.html
@@ -218,7 +218,7 @@ <h2 id="adds-modules">Adds modules<a class="headerlink" href="#adds-modules" tit
 <em>none found</em>                   </p>
 <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link">#</a></h2>
 <p>If running in docker, this module will run in a docker container from this image:<br></p>
-<pre><code>biolockjdevteam/biolockj_controller:v1.4.1
+<pre><code>biolockjdevteam/biolockj_controller:v1.4.2
 </code></pre>
 
 <p>This can be modified using the following properties:<br>

diff --git a/docs/GENERATED/biolockj.module.report.r/R_CalculateStats/index.html b/docs/GENERATED/biolockj.module.report.r/R_CalculateStats/index.html
@@ -340,7 +340,7 @@ <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link
 <code>R_CalculateStats.imageName</code><br>
 <code>R_CalculateStats.imageTag</code><br></p>
 <h2 id="citation">Citation<a class="headerlink" href="#citation" title="Permanent link">#</a></h2>
-<p>BioLockJ v1.4.1                 <br />
+<p>BioLockJ v1.4.2                 <br />
 Module created by Mike Sioda and developed by Ivory Blakley</p>
 
             </div>

diff --git a/docs/GENERATED/biolockj.module.report.r/R_PlotEffectSize/index.html b/docs/GENERATED/biolockj.module.report.r/R_PlotEffectSize/index.html
@@ -360,7 +360,7 @@ <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link
 <code>R_PlotEffectSize.imageName</code><br>
 <code>R_PlotEffectSize.imageTag</code><br></p>
 <h2 id="citation">Citation<a class="headerlink" href="#citation" title="Permanent link">#</a></h2>
-<p>BioLockJ v1.4.1                 <br />
+<p>BioLockJ v1.4.2                 <br />
 Module developed by Ivory Blakley.</p>
 
             </div>

diff --git a/docs/GENERATED/biolockj.module.report.r/R_PlotOtus/index.html b/docs/GENERATED/biolockj.module.report.r/R_PlotOtus/index.html
@@ -356,7 +356,7 @@ <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link
 <code>R_PlotOtus.imageName</code><br>
 <code>R_PlotOtus.imageTag</code><br></p>
 <h2 id="citation">Citation<a class="headerlink" href="#citation" title="Permanent link">#</a></h2>
-<p>BioLockJ v1.4.1                 <br />
+<p>BioLockJ v1.4.2                 <br />
 Module created by Mike Sioda and developed by Ivory Blakley</p>
 
             </div>

diff --git a/docs/GENERATED/biolockj.module.report.taxa/AddMetadataToTaxaTables/index.html b/docs/GENERATED/biolockj.module.report.taxa/AddMetadataToTaxaTables/index.html
@@ -304,7 +304,7 @@ <h2 id="adds-modules">Adds modules<a class="headerlink" href="#adds-modules" tit
 <em>none found</em>                   </p>
 <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link">#</a></h2>
 <p>If running in docker, this module will run in a docker container from this image:<br></p>
-<pre><code>biolockjdevteam/biolockj_controller:v1.4.1
+<pre><code>biolockjdevteam/biolockj_controller:v1.4.2
 </code></pre>
 
 <p>This can be modified using the following properties:<br>
@@ -313,7 +313,7 @@ <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link
 <code>AddMetadataToTaxaTables.imageTag</code><br></p>
 <h2 id="citation">Citation<a class="headerlink" href="#citation" title="Permanent link">#</a></h2>
 <p>Module developed by Mike Sioda and Anthony Fodor                 <br />
-BioLockJ v1.4.1</p>
+BioLockJ v1.4.2</p>
 
             </div>
           </div>

diff --git a/docs/GENERATED/biolockj.module.report.taxa/AddPseudoCount/index.html b/docs/GENERATED/biolockj.module.report.taxa/AddPseudoCount/index.html
@@ -283,15 +283,15 @@ <h2 id="adds-modules">Adds modules<a class="headerlink" href="#adds-modules" tit
 <em>none found</em>                   </p>
 <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link">#</a></h2>
 <p>If running in docker, this module will run in a docker container from this image:<br></p>
-<pre><code>biolockjdevteam/biolockj_controller:v1.4.1
+<pre><code>biolockjdevteam/biolockj_controller:v1.4.2
 </code></pre>
 
 <p>This can be modified using the following properties:<br>
 <code>AddPseudoCount.imageOwner</code><br>
 <code>AddPseudoCount.imageName</code><br>
 <code>AddPseudoCount.imageTag</code><br></p>
 <h2 id="citation">Citation<a class="headerlink" href="#citation" title="Permanent link">#</a></h2>
-<p>BioLockJ v1.4.1</p>
+<p>BioLockJ v1.4.2</p>
 
             </div>
           </div>

diff --git a/docs/GENERATED/biolockj.module.report.taxa/BuildTaxaTables/index.html b/docs/GENERATED/biolockj.module.report.taxa/BuildTaxaTables/index.html
@@ -283,7 +283,7 @@ <h2 id="adds-modules">Adds modules<a class="headerlink" href="#adds-modules" tit
 <em>none found</em>                   </p>
 <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link">#</a></h2>
 <p>If running in docker, this module will run in a docker container from this image:<br></p>
-<pre><code>biolockjdevteam/biolockj_controller:v1.4.1
+<pre><code>biolockjdevteam/biolockj_controller:v1.4.2
 </code></pre>
 
 <p>This can be modified using the following properties:<br>
@@ -292,7 +292,7 @@ <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link
 <code>BuildTaxaTables.imageTag</code><br></p>
 <h2 id="citation">Citation<a class="headerlink" href="#citation" title="Permanent link">#</a></h2>
 <p>Module developed by Mike Sioda                 <br />
-BioLockJ v1.4.1</p>
+BioLockJ v1.4.2</p>
 
             </div>
           </div>

diff --git a/docs/GENERATED/biolockj.module.report.taxa/LogTransformTaxaTables/index.html b/docs/GENERATED/biolockj.module.report.taxa/LogTransformTaxaTables/index.html
@@ -287,7 +287,7 @@ <h2 id="adds-modules">Adds modules<a class="headerlink" href="#adds-modules" tit
 <em>none found</em>                   </p>
 <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link">#</a></h2>
 <p>If running in docker, this module will run in a docker container from this image:<br></p>
-<pre><code>biolockjdevteam/biolockj_controller:v1.4.1
+<pre><code>biolockjdevteam/biolockj_controller:v1.4.2
 </code></pre>
 
 <p>This can be modified using the following properties:<br>
@@ -296,7 +296,7 @@ <h2 id="docker">Docker<a class="headerlink" href="#docker" title="Permanent link
 <code>LogTransformTaxaTables.imageTag</code><br></p>
 <h2 id="citation">Citation<a class="headerlink" href="#citation" title="Permanent link">#</a></h2>
 <p>Module developed by Mike Sioda                 <br />
-BioLockJ v1.4.1</p>
+BioLockJ v1.4.2</p>
 
             </div>
           </div>