·
14 commits
to main
since this release
🚀 What's Changed
Models
- Implement MatchMaker by @andrejlamov in #67
- Implement GCN-BMP by @mughetto in #71
- Implement DeepDrug by @kajocina in #68
- Implement DeepDDI by @hzcheney in #63
- Implement CASTER by @andriy-nikolov in #73
- Implement MHCADDI by @sebastiandro in #74
- Implement DeepDDS by @kkaris in #53
- Implement SSIDDI by @yuwvandy in #77
- Implement DeepDDS and CASTER defaults and remove DeepDDS Softmax bug by @benedekrozemberczki in #81
- Implement MRGNN by @benedekrozemberczki in #82
- Simplify existing models by @cthoyt in #69
- Clean up models and provide abstractions by @cthoyt in #83
💾 Data Cleaning
- Clean up DrugBank and TWOSIDES importers by @cthoyt in #57
- Add additional datasets by @cthoyt in #61
🤖 Design
- Provide base class for dataset loaders by @cthoyt in #59
- Move back the BatchGenerator to the data namespace. by @benedekrozemberczki in #80
🏠 House keeping
- Black update conformity by @benedekrozemberczki in #66
- Remove check box that's automated with CI by @cthoyt in #64
- Standardize documentation style with
darglintby @cthoyt in #70 - Update citations and add additional testing by @cthoyt in #72
- New release updates, citation modification and correcting paper references by @benedekrozemberczki in #85
New Contributors
- @andrejlamov made their first contribution in #67
- @kajocina made their first contribution in #68
- @mughetto made their first contribution in #71
- @hzcheney made their first contribution in #63
- @andriy-nikolov made their first contribution in #73
- @kkaris made their first contribution in #53
- @yuwvandy made their first contribution in #77
- @sebastiandro made their first contribution in #74
Full Changelog: v0.0.9...v0.1.0
Contributors
andrejlamov, sebastiandro, and 8 other contributors