Update pyproject.

AllenInstitute · Dec 10, 2024 · 30e565b · 30e565b
1 parent e4a6696
commit 30e565b
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Showing 2 changed files with 18 additions and 10 deletions.
diff --git a/.github/workflows/abc_atlas_access_ci.yaml b/.github/workflows/abc_atlas_access_ci.yaml
@@ -21,6 +21,6 @@ jobs:
       - name: Install
         run: |
           python -m pip install --upgrade pip
-          pip install .
+          pip install ".[test]"
       - name: Test
         run: pytest tests
diff --git a/pyproject.toml b/pyproject.toml
@@ -4,22 +4,15 @@ build-backend = "hatchling.build"
 
 [project]
 name = "abc_atlas_access"
-version = "0.3.0"
+version = "0.4.0"
 description = "A package for accessing/processing data from the ABC Atlas"
 dependencies = [
   "anndata",
   "boto3",
-  "ghp-import",
-  "matplotlib",
-  "moto",
   "numpy",
   "pandas",
   "pydantic",
-  "pytest",
-  "requests",
-  "scipy",
-  "SimpleITK",
-  "tqdm",
+  "tqdm"
 ]
 requires-python = ">=3.8"
 authors = [
@@ -31,3 +24,18 @@ classifiers = [
   "Development Status :: 4 - Beta",
   "Programming Language :: Python"
 ]
+
+[project.optional-dependencies]
+notebooks = [
+  "matplotlib",
+  "scipy",
+  "SimpleITK"
+]
+jupyter-book = [
+    "ghp-import",
+    "jupyter-book"
+]
+test = [
+    "moto",
+    "pytest"
+]