Covalent Beta Release

.flake8

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+# Copyright 2021 Agnostiq Inc.
+#
+# This file is part of Covalent.
+#
+# Licensed under the GNU Affero General Public License 3.0 (the "License").
+# A copy of the License may be obtained with this software package or at
+#
+#      https://www.gnu.org/licenses/agpl-3.0.en.html
+#
+# Use of this file is prohibited except in compliance with the License. Any
+# modifications or derivative works of this file must retain this copyright
+# notice, and modified files must contain a notice indicating that they have
+# been altered from the originals.
+#
+# Covalent is distributed in the hope that it will be useful, but WITHOUT
+# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
+# FITNESS FOR A PARTICULAR PURPOSE. See the License for more details.
+#
+# Relief from the License may be granted by purchasing a commercial license.
+
+[flake8]
+max-line-length = 99
+max-complexity = 18
+select = B,C,E,F,W,T4,B9
+ignore = E501, E722, W503, F401, F403, F811, F841, E203

.github/workflows/badges.yml

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+# Copyright 2021 Agnostiq Inc.
+#
+# This file is part of Covalent.
+# 
+# Licensed under the GNU Affero General Public License 3.0 (the "License"). 
+# A copy of the License may be obtained with this software package or at
+#
+#      https://www.gnu.org/licenses/agpl-3.0.en.html
+#
+# Use of this file is prohibited except in compliance with the License. Any 
+# modifications or derivative works of this file must retain this copyright 
+# notice, and modified files must contain a notice indicating that they have 
+# been altered from the originals.
+#
+# Covalent is distributed in the hope that it will be useful, but WITHOUT
+# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
+# FITNESS FOR A PARTICULAR PURPOSE. See the License for more details.
+#
+# Relief from the License may be granted by purchasing a commercial license.
+
+name: badges
+
+on:
+  push:
+    branches:
+      - master
+
+jobs:
+  badges:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Check out master
+        uses: actions/checkout@v2
+      - name: Set up Python
+        uses: actions/setup-python@v2
+        with:
+          python-version: 3.8
+      - name: Install Python dependencies
+        run: |
+          python -m pip install --upgrade pip
+          pip install anybadge pylint
+          mkdir -p badges
+      - name: Read version
+        run: |
+          VERSION="$(cat ./VERSION)"
+          echo "VERSION=$VERSION" >> $GITHUB_ENV
+      - name: Generate version badge
+        run: anybadge -l "version" -v $VERSION -c navy -f badges/version.svg
+      - name: Generate platform badge
+        run: anybadge -l "platform" -v "linux-64" -c gray -f badges/platform.svg
+      - name: Run linter
+        run: |
+          pylint covalent covalent_dispatcher --output-format=text --exit-zero | tee pylint.txt
+          SCORE=$(sed -n 's/^Your code has been rated at \([-0-9.]*\)\/.*/\1/p' pylint.txt)
+          echo "Pylint score was $SCORE"
+          anybadge -l "pylint" -v $SCORE -f badges/pylint.svg 2=red 4=orange 7=yellow 9=green
+      - name: Configure AWS credentials
+        uses: aws-actions/configure-aws-credentials@v1
+        with:
+          aws-access-key-id: ${{ secrets.AWS_KEY_ID }}
+          aws-secret-access-key: ${{ secrets.AWS_SECRET_ACCESS_KEY }}
+          aws-region: us-east-1
+      - name: Upload to S3
+        run: |
+          aws s3 sync ./badges/ ${{ secrets.AWS_BADGE_BUCKET }} \
+            --delete \
+            --cache-control no-cache \
+            --acl public-read

.github/workflows/condabuild.yml

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+# Copyright 2021 Agnostiq Inc.
+#
+# This file is part of Covalent.
+# 
+# Licensed under the GNU Affero General Public License 3.0 (the "License"). 
+# A copy of the License may be obtained with this software package or at
+#
+#      https://www.gnu.org/licenses/agpl-3.0.en.html
+#
+# Use of this file is prohibited except in compliance with the License. Any 
+# modifications or derivative works of this file must retain this copyright 
+# notice, and modified files must contain a notice indicating that they have 
+# been altered from the originals.
+#
+# Covalent is distributed in the hope that it will be useful, but WITHOUT
+# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
+# FITNESS FOR A PARTICULAR PURPOSE. See the License for more details.
+#
+# Relief from the License may be granted by purchasing a commercial license.
+
+name: conda
+
+on:
+  push:
+    branches-ignore:
+      - develop
+      - master
+
+jobs:
+  conda:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Check out head
+        uses: actions/checkout@v1
+        with:
+          fetch-depth: 0
+      - name: Check for build change
+        id: buildchange
+        run: git diff --name-only origin/develop | grep -e setup.py -e requirements.txt -e meta.yaml
+        continue-on-error: true
+      - name: Build conda package
+        if: steps.buildchange.outcome == 'success'
+        run: |
+          conda install conda-build conda-verify
+          conda config --append channels conda-forge
+          conda create --name buildenv python=3.8
+          $CONDA/bin/activate buildenv
+          conda build --override-channels .
+        

.github/workflows/publish.yml

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+# Copyright 2021 Agnostiq Inc.
+#
+# This file is part of Covalent.
+# 
+# Licensed under the GNU Affero General Public License 3.0 (the "License"). 
+# A copy of the License may be obtained with this software package or at
+#
+#      https://www.gnu.org/licenses/agpl-3.0.en.html
+#
+# Use of this file is prohibited except in compliance with the License. Any 
+# modifications or derivative works of this file must retain this copyright 
+# notice, and modified files must contain a notice indicating that they have 
+# been altered from the originals.
+#
+# Covalent is distributed in the hope that it will be useful, but WITHOUT
+# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
+# FITNESS FOR A PARTICULAR PURPOSE. See the License for more details.
+#
+# Relief from the License may be granted by purchasing a commercial license.
+
+name: publish
+
+on:
+  workflow_call:
+    secrets:
+      aws_ecr_repo:
+        required: true
+      aws_key_id:
+        required: true
+      aws_secret_access_key:
+        required: true
+
+jobs:
+  publish:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Check out head
+        uses: actions/checkout@v2
+      - name: Configure AWS credentials
+        uses: aws-actions/configure-aws-credentials@v1
+        with:
+          aws-access-key-id: ${{ secrets.aws_key_id }}
+          aws-secret-access-key: ${{ secrets.aws_secret_access_key }}
+          aws-region: us-east-1
+      - name: Login to ECR
+        uses: aws-actions/amazon-ecr-login@v1
+      - name: Generate tag
+        run: |
+          aws --version
+          docker info
+          docker --version
+          TAG="$(cat ./VERSION)"
+          if aws ecr describe-images \
+            --repository-name covalent \
+            --image-ids imageTag=$TAG &> /dev/null ; then
+            SHORT_SHA="${GITHUB_SHA::8}"
+            TAG=$TAG-$SHORT_SHA
+          fi
+          echo "TAG=$TAG" >> $GITHUB_ENV
+      - name: Build and push image
+        run: |
+          docker build -t ${{ secrets.aws_ecr_repo }} .
+          docker push ${{ secrets.aws_ecr_repo }}
+          docker tag ${{ secrets.aws_ecr_repo }} ${{ secrets.aws_ecr_repo }}:$TAG
+          docker push ${{ secrets.aws_ecr_repo }}:$TAG

.github/workflows/publish_develop.yml

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+# Copyright 2021 Agnostiq Inc.
+#
+# This file is part of Covalent.
+# 
+# Licensed under the GNU Affero General Public License 3.0 (the "License"). 
+# A copy of the License may be obtained with this software package or at
+#
+#      https://www.gnu.org/licenses/agpl-3.0.en.html
+#
+# Use of this file is prohibited except in compliance with the License. Any 
+# modifications or derivative works of this file must retain this copyright 
+# notice, and modified files must contain a notice indicating that they have 
+# been altered from the originals.
+#
+# Covalent is distributed in the hope that it will be useful, but WITHOUT
+# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
+# FITNESS FOR A PARTICULAR PURPOSE. See the License for more details.
+#
+# Relief from the License may be granted by purchasing a commercial license.
+
+name: Release Development Docker Image to ECR
+
+on:
+  push:
+    branches:
+      - develop
+
+jobs:
+  publish_develop:
+    uses: AgnostiqHQ/covalent/.github/workflows/publish.yml@develop
+    secrets:
+      aws_ecr_repo: ${{ secrets.AWS_ECR_DEV_REPO }}
+      aws_key_id: ${{ secrets.AWS_KEY_ID }}
+      aws_secret_access_key: ${{ secrets.AWS_SECRET_ACCESS_KEY }}

.github/workflows/publish_master.yml

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+# Copyright 2021 Agnostiq Inc.
+#
+# This file is part of Covalent.
+# 
+# Licensed under the GNU Affero General Public License 3.0 (the "License"). 
+# A copy of the License may be obtained with this software package or at
+#
+#      https://www.gnu.org/licenses/agpl-3.0.en.html
+#
+# Use of this file is prohibited except in compliance with the License. Any 
+# modifications or derivative works of this file must retain this copyright 
+# notice, and modified files must contain a notice indicating that they have 
+# been altered from the originals.
+#
+# Covalent is distributed in the hope that it will be useful, but WITHOUT
+# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
+# FITNESS FOR A PARTICULAR PURPOSE. See the License for more details.
+#
+# Relief from the License may be granted by purchasing a commercial license.
+
+name: Release Docker Image to ECR
+
+on:
+  push:
+    branches:
+      - master
+
+jobs:
+  publish_master:
+    uses: AgnostiqHQ/covalent/.github/workflows/publish.yml@develop
+    secrets:
+      aws_ecr_repo: ${{ secrets.AWS_ECR_REPO }}
+      aws_key_id: ${{ secrets.AWS_KEY_ID }}
+      aws_secret_access_key: ${{ secrets.AWS_SECRET_ACCESS_KEY }}

.github/workflows/push_to_s3.yml

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+# Copyright 2021 Agnostiq Inc.
+#
+# This file is part of Covalent.
+#
+# Licensed under the GNU Affero General Public License 3.0 (the "License").
+# A copy of the License may be obtained with this software package or at
+#
+#      https://www.gnu.org/licenses/agpl-3.0.en.html
+#
+# Use of this file is prohibited except in compliance with the License. Any
+# modifications or derivative works of this file must retain this copyright
+# notice, and modified files must contain a notice indicating that they have
+# been altered from the originals.
+#
+# Covalent is distributed in the hope that it will be useful, but WITHOUT
+# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
+# FITNESS FOR A PARTICULAR PURPOSE. See the License for more details.
+#
+# Relief from the License may be granted by purchasing a commercial license.
+
+name: push-to-s3
+
+on:
+    push:
+        branches:
+            - develop
+            - develop-ui
+
+jobs:
+    publish:
+        runs-on: ubuntu-latest
+        steps:
+            - name: Check out head
+              uses: actions/checkout@v2
+            - name: Configure AWS credentials
+              uses: aws-actions/configure-aws-credentials@v1
+              with:
+                  aws-access-key-id: ${{ secrets.AWS_KEY_ID }}
+                  aws-secret-access-key: ${{ secrets.AWS_SECRET_ACCESS_KEY }}
+                  aws-region: us-east-1
+            - name: Deploy static site to S3 bucket
+              run: aws s3 sync ./covalent_ui/webapp/build-demo/ ${{ secrets.S3_STATIC }} --delete

.github/workflows/release.yml

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+# Copyright 2021 Agnostiq Inc.
+#
+# This file is part of Covalent.
+# 
+# Licensed under the GNU Affero General Public License 3.0 (the "License"). 
+# A copy of the License may be obtained with this software package or at
+#
+#      https://www.gnu.org/licenses/agpl-3.0.en.html
+#
+# Use of this file is prohibited except in compliance with the License. Any 
+# modifications or derivative works of this file must retain this copyright 
+# notice, and modified files must contain a notice indicating that they have 
+# been altered from the originals.
+#
+# Covalent is distributed in the hope that it will be useful, but WITHOUT
+# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
+# FITNESS FOR A PARTICULAR PURPOSE. See the License for more details.
+#
+# Relief from the License may be granted by purchasing a commercial license.
+
+name: release
+
+on:
+  push:
+    branches:
+      - master
+
+jobs:
+  release:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Check out master
+        uses: actions/checkout@v2
+        with:
+          persist-credentials: false
+          fetch-depth: 0
+      - name: Read version
+        run: |
+          VERSION="$(cat ./VERSION)"
+          echo "VERSION=$VERSION" >> $GITHUB_ENV
+          echo "RELEASE=v$VERSION" >> $GITHUB_ENV
+      - name: Tag commit
+        id: push
+        run: |
+          git config user.name "CovalentOpsBot"
+          git config user.email "[email protected]"
+          git tag -a $RELEASE -m "Release $RELEASE"
+          git remote set-url origin https://${{ secrets.COVALENT_OPS_BOT_TOKEN }}@github.com/AgnostiqHQ/covalent.git
+          git push origin $RELEASE
+      - name: Generate release message
+        id: message
+        run: |
+          begin=$(grep -n "\b${VERSION}\b" ./CHANGELOG.md | cut -d ':' -f 1)
+          previous_version=$(git describe --abbrev=0 $RELEASE^ | cut -c2-)
+          end=$(tail -n +$((begin+1)) ./CHANGELOG.md | grep -n -m 1 "\b${previous_version}\b" | cut -d ':' -f 1)
+          echo 'MESSAGE<<EOF' >> $GITHUB_ENV
+          tail +$begin ./CHANGELOG.md | head -$end >> $GITHUB_ENV
+          echo 'EOF' >> $GITHUB_ENV
+      - name: Create release
+        if: ${{ steps.push.outcome == 'success' && steps.message.outcome == 'success' }}
+        uses: ncipollo/release-action@v1
+        with:
+          body: ${{ env.MESSAGE }}
+          token: ${{ secrets.COVALENT_OPS_BOT_TOKEN }}
+          tag: ${{ env.RELEASE }}