AMICI v0.29.0

Fixes

• Fixed race conditions in froot, which could have resulted in incorrect
  simulation results for models with events/heavisides/piecewise, for
  multi-threaded simulations.

  by @dweindl in #2587

• Fixed race conditions for the max-time check, which could have resulted in
  incorrect termination of simulations in case of multi-threaded simulations
  in combination with a time limit.

  by @dweindl in #2587

• Added missing fields in ExpData HDF5 I/O

  by @dweindl in #2593

• Added missing fields in ReturnData HDF5 output

  by @dweindl in #2602

Features

• Generate models in a JAX-compatible format (example)

  by @FFroehlich in #1861

• Faster fill_in_parameters_for_condition

  by @dweindl in #2586

• Added Python function writeSimulationExpData for writing ExpData to HDF5

  by @dweindl in #2588

• Improved import of amici-generated models via amici.import_model_module().

  So far, it was not possible to import different model modules with the same
  name. This is now possible if they are in different directories.
  Overwriting an already imported module is still not possible (and never
  was); any attempts to do so will raise a RuntimeError.
  While model packages can, in principle, be imported using regular
  imports, it is strongly recommended to use amici.import_model_module().

  by @dweindl in #2604, #2603, #2596

Full Changelog: v0.28.0...v0.29.0