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Do a SNP injection, to see if NN has learned genotypes #38

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richelbilderbeek opened this issue May 11, 2022 · 1 comment
Open

Do a SNP injection, to see if NN has learned genotypes #38

richelbilderbeek opened this issue May 11, 2022 · 1 comment

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@richelbilderbeek
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From Daniil (#22):

Use a neural network that is trained on a real dataset, then inject SNPs and phenotypes. In that way, you should detect if the neural network pick it up yes/no

@richelbilderbeek richelbilderbeek mentioned this issue May 11, 2022
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@richelbilderbeek
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I would say: train a neural network on simulated data with a known SNP, then ignore that SNP (i.e. all genotypes have the major/minor allele) and train on a new one. Plot the dynamics.

issue_38

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