surface research subject tab and clean up explorer

ACED-IDP · Aug 12, 2024 · 2aab9ec · 2aab9ec
1 parent 6953f92
commit 2aab9ec
Showing 1 changed file with 30 additions and 20 deletions.
diff --git a/packages/sampleCommons/config/cbds/explorer.json b/packages/sampleCommons/config/cbds/explorer.json
@@ -18,7 +18,6 @@
         "filters": {
             "tabs": [
                 {
-                    "title": "Specimen",
                     "fields": [
                         "project_id",
                         "enrollment_diagnosis", 
@@ -70,6 +69,19 @@
                     "subject_type"
                 ]
             },
+            "columns": {
+                "specimen_identifier":
+                {
+                  "title": "BEMS ID"
+                },
+                "identifier":
+                {
+                  "title": "Subject ID"
+                },
+                "product_notes_project_id": {
+                    "title": "Product Notes Project ID"
+                }
+            },
             "fields": [
                 "specimen_identifier",
                 "identifier",
@@ -86,7 +98,6 @@
                 "specimen_processing_method",
                 "specimen_collection_concept",
                 "treatments",
-
                 "tissue_type",
                 "histology",
                 "allocated_for_site",
@@ -109,7 +120,7 @@
         "guppyConfig": {
             "dataType": "observation",
             "fieldMapping": [],
-            "nodeCountTitle": "Observations",
+            "nodeCountTitle": "Specimens",
             "manifestMapping": {
                 "resourceIndexType": "Observation",
                 "resourceIdField": "_patient_id",
@@ -123,11 +134,10 @@
         }
     },
     {
-        "tabTitle": "Subject",
+        "tabTitle": "Research Subject",
         "filters": {
             "tabs": [
                 {
-                    "title": "Subject",
                     "fields": [
                         "project_id"
                     ]
@@ -136,34 +146,34 @@
         },
         "table": {
             "enabled": true,
+            "columns" : {
+                "project_id": {
+                    "title": "Clinical Trial"
+                },
+                "identifier": {
+                    "title": "Research Subject ID"
+                },
+                "subject_id": {
+                    "title": "Patient ID"
+                }
+            },
             "fields": [
                 "project_id",
-                "patient_id"
+                "identifier",
+                "subject_id"
             ]
         },
         "dropdowns": {},
         "guppyConfig": {
-            "dataType": "observation",
-            "fieldMapping": [],
-            "nodeCountTitle": "Patients",
-            "manifestMapping": {
-                "resourceIndexType": "Observation",
-                "resourceIdField": "_patient_id",
-                "referenceIdFieldInResourceIndex": "object_id",
-                "referenceIdFieldInDataIndex": "object_id"
-            },
-            "accessibleFieldCheckList": [
-                "project_id"
-            ],
-            "accessibleValidationField": "project_id"
+            "dataType": "researchsubject",
+            "nodeCountTitle": "Research Subjects"
         }
     },
     {
         "tabTitle": "File",
         "filters": {
             "tabs": [
                 {
-                    "title": "File",
                     "fields": [
                         "project_id",
                         "contentType"