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Volcano plot #251

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yshs01 opened this issue Jul 31, 2024 · 0 comments
Open

Volcano plot #251

yshs01 opened this issue Jul 31, 2024 · 0 comments

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@yshs01
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yshs01 commented Jul 31, 2024

Hi,

First, I must say I really enjoy the pipeline, function, and package. It really is quite nice, well-organized, and customizable. Thank you for all the time and effort you must put into this. With that said, I was wondering if there is a way to create a single volcano plot for my experiment and control T cells after RunDEtest?

CD8T <- RunDEtest(srt = CD8T, group_by = "status", fc.threshold = 1)

VolcanoPlot(srt = CD8T, group_by = "status", nlabel = 10)

When I do it this way, I get two plots split by status. I didn't see a way in code but was curious if I just missed something or if anyone had an easy work around to plot this into one volcano plot.

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