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setup.py
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setup.py
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import setuptools
with open("README.md", "r") as fh:
long_description = fh.read()
from src.dlomix import META_DATA, __version__
VERSION = __version__
setuptools.setup(
name=META_DATA["package_name"].lower(),
version=VERSION,
author=META_DATA["author"],
author_email=META_DATA["author_email"],
description=META_DATA["description"],
long_description=long_description,
long_description_content_type="text/markdown",
url=META_DATA["github_url"],
packages=setuptools.find_packages(where="src"),
package_dir={"": "src"},
include_package_data=True,
package_data={"": ["data/processing/pickled_feature_dicts/*"]},
install_requires=[
"datasets",
"fpdf",
"pandas",
"numpy",
"matplotlib",
"scikit-learn",
"tensorflow>=2.13,<2.16", # 2.16 introduces breaking changes and has Keras 3 as default
"tensorflow_probability>=0.21",
"pyarrow",
"seaborn",
],
extras_require={
"dev": [
"pytest >= 3.7",
"pytest-cov",
"black",
"twine",
"setuptools",
"wheel",
"pylint",
],
"wandb": [
"wandb >= 0.15",
],
},
classifiers=[
"Programming Language :: Python :: 3",
"Programming Language :: Python :: 3.8",
"License :: OSI Approved :: MIT License",
"Operating System :: OS Independent",
"Topic :: Scientific/Engineering :: Bio-Informatics",
"Development Status :: 1 - Planning",
"Intended Audience :: Science/Research",
],
)