diff --git a/R/config.R b/R/config.R index 03aa68c..5d43046 100644 --- a/R/config.R +++ b/R/config.R @@ -383,7 +383,6 @@ VitessceConfigView <- R6::R6Class("VitessceConfigView", } invisible(self) }, - #' @description use_coordination_by_dict = function(scopes) { # TODO invisible(self) diff --git a/R/wrappers_anndata.R b/R/wrappers_anndata.R index 395be20..2e2856f 100644 --- a/R/wrappers_anndata.R +++ b/R/wrappers_anndata.R @@ -89,7 +89,7 @@ AnnDataWrapper <- R6::R6Class("AnnDataWrapper", #' @param coordination_values A list of coordination values for the file definition. #' @param ... Parameters inherited from `AbstractWrapper`. #' @return A new `AnnDataWrapper` object. - initialize = function(adata_path = NA, adata_url = NA, obs_feature_matrix_path = NA, feature_filter_path = NA, initial_feature_filter_path = NA, obs_set_paths = NA, obs_set_names = NA, obs_locations_path = NA, obs_segmentations_path = NA, obs_embedding_paths = NA, obs_embedding_names = NA, obs_embedding_dims = NA, request_init = NA, feature_labels_path = NA, obs_labels_path = NA, coordination_values = NA, obs_labels_paths = NA, obs_labels_names = NA, ...) { + initialize = function(adata_path = NA, adata_url = NA, obs_feature_matrix_path = NA, feature_filter_path = NA, initial_feature_filter_path = NA, obs_set_paths = NA, obs_set_names = NA, obs_locations_path = NA, obs_segmentations_path = NA, obs_embedding_paths = NA, obs_embedding_names = NA, obs_embedding_dims = NA, request_init = NA, feature_labels_path = NA, coordination_values = NA, obs_labels_paths = NA, obs_labels_names = NA, ...) { super$initialize(...) self$adata_path <- adata_path self$adata_url <- adata_url diff --git a/man/AnnDataWrapper.Rd b/man/AnnDataWrapper.Rd index 886ffbe..184e28f 100644 --- a/man/AnnDataWrapper.Rd +++ b/man/AnnDataWrapper.Rd @@ -109,7 +109,6 @@ Create a wrapper around an AnnData object saved to a Zarr store. obs_embedding_dims = NA, request_init = NA, feature_labels_path = NA, - obs_labels_path = NA, coordination_values = NA, obs_labels_paths = NA, obs_labels_names = NA,