DESCRIPTION

Package: Seurat.utils
Title: Seurat.utils - utility functions for Seurat
Version: 2.8.5
Authors@R: 
    person("Abel", "Vertesy", , "av@imba.oeaw.ac.at", role = c("aut", "cre"))
Author: Abel Vertesy <av@imba.oeaw.ac.at> [aut, cre]
Description: Seurat.utils Is a collection of utility functions for Seurat
    single cell analysis.  Functions allow 3D plotting, visualisation of
    statistics & QC, the automation / multiplexing of plotting,
    interaction with the Seurat object, etc.  Some functionalities require
    functions from CodeAndRoll and MarkdownReports libraries.
License: GPL-3 + file LICENSE
BugReports: https://github.com/vertesy/Seurat.utils/issues
Depends: 
    CodeAndRoll2,
    ggExpress,
    magrittr,
    Seurat,
    Stringendo,
    tidyverse
Imports: 
    checkmate,
    cowplot,
    dplyr,
    EnhancedVolcano,
    foreach,
    fs,
    future,
    ggcorrplot,
    ggplot2,
    ggpubr,
    ggrepel,
    gplots,
    harmony,
    HGNChelper,
    htmlwidgets,
    MarkdownHelpers,
    MarkdownReports,
    Matrix,
    matrixStats,
    pheatmap,
    plotly,
    princurve,
    qs,
    R.utils,
    RColorBrewer,
    readr,
    ReadWriter,
    reshape2,
    rstudioapi,
    scales,
    SeuratObject,
    SoupX,
    sparseMatrixStats,
    stringr,
    tibble,
    tictoc
Suggests: 
    clusterProfiler,
    DatabaseLinke.R,
    enrichplot,
    vroom
Encoding: UTF-8
Packaged: 2024-10-23 22:59:23.332565
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.1