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ci.yml
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---
# Run basic tests for this app on the latest aiidalab-docker image.
name: continuous-integration
on: [push, pull_request]
# https://docs.github.com/en/actions/using-jobs/using-concurrency
concurrency:
# only cancel in-progress jobs or runs for the current workflow - matches against branch & tags
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
jobs:
pre-commit:
# Adapted from: https://github.com/CasperWA/voila-optimade-client
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Setup Python
uses: actions/setup-python@v4
with:
python-version: '3.10'
cache: pip
cache-dependency-path: |
.pre-commit-config.yaml
**/setup.cfg
**/pyproject.toml
**/requirements*.txt
- uses: pre-commit/[email protected]
test-notebooks:
needs: [pre-commit]
strategy:
matrix:
tag: [latest]
browser: [Chrome, Firefox]
python-version: ['3.10']
fail-fast: false
runs-on: ubuntu-latest
timeout-minutes: 30
steps:
- name: Check out app
uses: actions/checkout@v4
- name: Set up Python
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
cache: pip
cache-dependency-path: |
**/setup.cfg
**/pyproject.toml
**/requirements*.txt
- name: Install package test dependencies
run: pip install -e .[dev]
- name: Set jupyter token env
run: echo "JUPYTER_TOKEN=$(openssl rand -hex 32)" >> $GITHUB_ENV
# The Firefox and its engine geckodrive need do be installed manually to run
# selenium tests.
- name: Install Firefox
uses: browser-actions/setup-firefox@latest
with:
firefox-version: '96.0'
if: matrix.browser == 'Firefox'
- name: Install geckodriver
run: |
wget -c https://github.com/mozilla/geckodriver/releases/download/v0.30.0/geckodriver-v0.30.0-linux64.tar.gz
tar xf geckodriver-v0.30.0-linux64.tar.gz -C /usr/local/bin
if: matrix.browser == 'Firefox'
- name: Run pytest
run: pytest -v --driver ${{ matrix.browser }} tests_notebooks
env:
TAG: ${{ matrix.tag }}
- name: Upload screenshots as artifacts
if: always()
uses: actions/upload-artifact@v3
with:
name: Screenshots-${{ matrix.tag }}-${{ matrix.browser }}
path: screenshots/
if-no-files-found: error
test-package:
needs: [pre-commit]
strategy:
matrix:
tag: [latest]
python-version: ['3.8', '3.9', '3.10']
fail-fast: false
runs-on: ubuntu-latest
timeout-minutes: 30
services:
rabbitmq:
image: rabbitmq:latest
ports:
- 5672:5672
steps:
- name: Check out app
uses: actions/checkout@v4
- name: Install povray
run: sudo apt-get install povray
- name: Set up Python
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
cache: pip
cache-dependency-path: |
**/setup.cfg
**/pyproject.toml
**/requirements*.txt
- name: Install package
run: pip install -e .[dev,smiles]
- name: Run pytest
run: pytest -v tests --cov
env:
TAG: ${{ matrix.tag }}
- name: Upload coverage reports to Codecov
uses: codecov/codecov-action@v3
with:
flags: python-${{ matrix.python-version }}