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Setting up dracarys on a DB cluster, installs fine but need to lock in {rlang} and {RJSONIO} beforehand:
{rlang}
{RJSONIO}
> dracarys::TsoTmbTraceTsvFile$new(url1) Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) : namespace ‘rlang’ 1.0.6 is already loaded, but >= 1.1.0 is required
# before installing dracarys > sessionInfo() R version 4.2.2 Patched (2022-11-10 r83330) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Ubuntu 22.04.2 LTS Matrix products: default BLAS: /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 LAPACK: /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblasp-r0.3.20.so locale: [1] LC_CTYPE=C.UTF-8 LC_NUMERIC=C LC_TIME=C.UTF-8 [4] LC_COLLATE=C.UTF-8 LC_MONETARY=C.UTF-8 LC_MESSAGES=C.UTF-8 [7] LC_PAPER=C.UTF-8 LC_NAME=C LC_ADDRESS=C [10] LC_TELEPHONE=C LC_MEASUREMENT=C.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] stats graphics grDevices utils datasets methods base loaded via a namespace (and not attached): [1] SparkR_3.4.0 compiler_4.2.2 Rserve_1.8-12
Solution:
install.packages("RJSONIO") devtools::install_github("umccr/dracarys", upgrade_dependencies = FALSE, dependencies = FALSE)
Will experiment a bit with the custom Docker setup at some point.
The text was updated successfully, but these errors were encountered:
pdiakumis
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Setting up dracarys on a DB cluster, installs fine but need to lock in
{rlang}
and{RJSONIO}
beforehand:Solution:
Will experiment a bit with the custom Docker setup at some point.
The text was updated successfully, but these errors were encountered: