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setup.py
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setup.py
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import sys
from setuptools import setup, find_packages
py35 = (sys.version_info[0] == 3 and sys.version_info[1] >= 5)
setup(
name='nosqlbiosets',
version='0.0.5',
description='Index/query scripts '
'for selected free bioinformatics datasets',
author='Mahmut Uludag',
author_email='[email protected]',
url='https://bitbucket.org/hspsdb/nosql-biosets',
license='MIT License',
install_requires=[
'argh',
'elasticsearch==7.16.3',
'networkx' if py35 else 'networkx==2.2',
'pymongo',
'six',
'xmltodict'
],
extras_require={
'gffutils': (
'gffutils'
),
'neo4j': (
'neo4j-driver'
),
'pivottablejs': (
'pivottablejs',
),
'sqlalchemy': (
'SQLAlchemy'
),
'pandas': (
'pandas'
),
'py2cytoscape': (
'py2cytoscape'
),
'cobra': (
'cobra', 'cobrababel', 'psamm'
)
},
packages=find_packages(),
scripts=['scripts/nosqlbiosets'],
keywords=['bioinformatics'],
classifiers=[
'Intended Audience :: Science/Research',
'Development Status :: 3 - Alpha'],
platforms='GNU/Linux, Mac OS X',
test_suite='tests'
)