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Hi, I've got the following error saying " object 'tickvals' not found".
I can actually obtain the picture in png format already, but cannot generate an interactive html figure.
Maybe something wrong with related packages?
Thanks very much in advance.
Best, Tao
(base) [zhaot@alice dotplot]$ pafCoordsDotPlotly.R -i hf.genome_flye.minimap2.paf -o hf.genome_flye.minimap2.paf.plot -m 4000 -q 500000 -k 17 -s -t -l -p 20
Warning message:
package ‘ggplot2’ was built under R version 3.6.3
PARAMETERS:
input (-i): hf.genome_flye.minimap2.paf
output (-o): hf.genome_flye.minimap2.paf.plot
minimum query aggregate alignment length (-q): 5e+05
minimum alignment length (-m): 4000
plot size (-p): 20
show horizontal lines (-l): TRUE
number of reference chromosomes to keep (-k): 17
show % identity (-s): TRUE
show % identity for on-target alignments only (-t): TRUE
produce interactive plot (-x): TRUE
reference IDs to keep (-r):
Number of alignments: 107664
Number of query sequences: 3193
After filtering... Number of alignments: 29582
After filtering... Number of query sequences: 993
Error in eval(substitute(expr), data, enclos = parent.frame()) :
object 'tickvals' not found
Calls: ggplotly ... lapply -> FUN -> with -> with.default -> eval -> eval
No traceback available
The text was updated successfully, but these errors were encountered:
Hi, I've got the following error saying " object 'tickvals' not found".
I can actually obtain the picture in png format already, but cannot generate an interactive html figure.
Maybe something wrong with related packages?
Thanks very much in advance.
Best, Tao
The text was updated successfully, but these errors were encountered: