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ci.yml
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# Continuous integration using conda installation
name: CI
on:
pull_request:
types: [opened, reopened, synchronize]
paths:
- "sleap/**"
- "tests/**"
- ".github/workflows/ci.yml"
- "environment_no_cuda.yml"
- "requirements.txt"
- "dev_requirements.txt"
# push:
# branches:
# - main
# - develop
# paths:
# - "sleap/**"
# - "tests/**"
# - ".github/workflows/ci.yml"
# - "environment_no_cuda.yml"
# - "requirements.txt"
# - "dev_requirements.txt"
jobs:
# Lint
lint:
name: Lint
runs-on: "ubuntu-22.04"
steps:
- name: Checkout repo
uses: actions/checkout@v4
- name: Set up Python 3.7
uses: actions/setup-python@v5
with:
python-version: 3.7
- name: Install Dependencies
run: |
pip install click==8.0.4
pip install black==21.6b0
- name: Run Black
run: |
black --check sleap tests
# Tests
tests:
name: Tests (${{ matrix.os }})
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: ["ubuntu-22.04", "windows-2022", "macos-14"]
include:
# Default values
- env_file: environment_no_cuda.yml
# Mac specific values
- os: macos-14
env_file: environment_mac.yml
steps:
- name: Checkout repo
uses: actions/checkout@v4
- name: Setup Conda
uses: conda-incubator/[email protected]
with:
miniforge-version: latest
conda-solver: "libmamba"
environment-file: ${{ matrix.env_file }}
activate-environment: sleap_ci
# Print environment info
- name: Print environment info
shell: bash -l {0}
run: |
which python
conda info
conda list
pip freeze
# Test environment
- name: Test with pytest
shell: bash -l {0}
run: |
pytest --cov=sleap --cov-report=xml --durations=-1 tests/
# Upload coverage
- name: Upload coverage
uses: codecov/codecov-action@v4
with:
token: ${{ secrets.CODECOV_TOKEN }}
fail_ci_if_error: true
verbose: false