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current_functionalities.html
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<html>
<head>
<meta http-equiv=Content-Type content="text/html; charset=windows-1252">
<title>Table 1</title>
<style><!--
.Section1
{page:Section1;}
-->
</style>
</head>
<body bgcolor="#FFFFFF" class="Normal" lang=EN-US>
<div class=Section1>
<p>Table 1. Current Functionalities of PubSearch Web Application</p>
<table border=1 cellspacing=0 cellpadding=0>
<tr>
<td width=144 valign=top class="Normal"> <p>PubSearch Features</p></td>
<td width=451 valign=top class="Normal"> <p>Description</p></td>
</tr>
<tr>
<td width=144 valign=top class="Normal"> <p>Search: </p></td>
<td width=451 valign=top class="Normal"> <p>Search for genes, keywords,
articles, or associations between articles and genes using a number
of parameters</p>
<p>Full-text search of articles</p>
<p>Direct SQL queries</p></td>
</tr>
<tr>
<td width=144 valign=top class="Normal"> <p>Display results: </p></td>
<td width=451 valign=top class="Normal"> <p>Search result summary pages:
Gene list, Article list, Hit list (displays terms and article abstract
highlighting the hits)</p></td>
</tr>
<tr>
<td width=144 valign=top class="Normal"> <p>Browse keywords: </p></td>
<td width=451 valign=top class="Normal"> <p>Modified AmiGo (http://godatabase.org)
to display controlled vocabularies and pass appropriate keywords to
the annotation interface</p></td>
</tr>
<tr>
<td width=144 valign=top class="Normal"> <p>Add </p></td>
<td width=451 valign=top class="Normal"> <p>Add temp term, gene, article,
locus, annotation</p></td>
</tr>
<tr>
<td width=144 valign=top class="Normal"> <p>Detail Pages</p></td>
<td width=451 valign=top class="Normal"> <p>Locus, Gene, Article, Term,
Annotation,Sequence, Communication, URL</p></td>
</tr>
<tr>
<td width=144 valign=top class="Normal"> <p>Automated generation</p>
<p>Of associations</p></td>
<td width=451 valign=top class="Normal"> <p>All terms (genes and keywords)
are automatically matched - to article titles and abstracts</p></td>
</tr>
<tr>
<td width=144 valign=top class="Normal"> <p>Association</p>
<p>Validation</p></td>
<td width=451 valign=top class="Normal"> <p>Manual validation of association
of genes to articles.</p></td>
</tr>
<tr>
<td width=144 valign=top class="Normal"> <p>Annotation</p></td>
<td width=451 valign=top class="Normal"> <p>Annotate genes to terms. </p></td>
</tr>
<tr>
<td width=144 valign=top class="Normal"> </td>
<td width=451 valign=top class="Normal"> </td>
</tr>
</table>
</div>
</body>
</html>