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Exporting COMBINE archives with results #207

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0u812 opened this issue Sep 13, 2017 · 1 comment
Open

Exporting COMBINE archives with results #207

0u812 opened this issue Sep 13, 2017 · 1 comment

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@0u812
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0u812 commented Sep 13, 2017

Frank's SED-ML Web Tools allow exporting COMBINE archives with results. When the SED-ML specifies a plot in the output, the archive contains a png. When the SED-ML specifies a report, the output contains a report in NuML. I'd like to add this ability to Tellurium before the paper submission.

@matthiaskoenig
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Also need this feature, see
matthiaskoenig/tellurium-web#28

Please make sure to put the results in a subfolder and not the root of the archive, and create subfolders for all sedml files. I have archives with multiple sedml files which should all be executed but not overwrite each others results if the outputs have the same id

I.e. something in the direction of:

/__tellurium__/sedml1/plot1.png
/__tellurium__/sedml1/plot2.png
/__tellurium__/sedml1/report1.png
/__tellurium__/sedml2/report1.png

My idea is that the different tools can just add there subfolders with the results to the combine archive, i.e. the Sedml webtools would add ideally:

/__sedml-webtools__/sedml1/plot1.png
/__sedml-webtools__/sedml1/plot2.png
/__sedml-webtools__/sedml1/report1.png
/__sedml-webtools__/sedml2/report1.png

Same for copasi, ... That would allow to execute the archive with all tools and collect the results for comparison.
M

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