QIIME 2™ is a next-generation microbiome bioinformatics platform that is extensible, free, open-source, and community developed.
This pipeline was created based on the QIIME2 guide published in Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
For this specific project, data was obtained by sequencing the 16S rRNA gene from environmental samples. The details can be found in the published manuscript Prior exposure of microbial communities to seawater reduces resilience but increases compositional and functional resistance to flooding events
