From f7bda0349d79deb44d7f416204bea5a145d82b2e Mon Sep 17 00:00:00 2001 From: Sigve Nakken Date: Thu, 1 Aug 2024 15:10:29 +0200 Subject: [PATCH] =?UTF-8?q?Bump=20version:=202.0.2=20=E2=86=92=202.0.3?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- .bumpversion.cfg | 2 +- .github/workflows/build_conda_recipes.yaml | 2 +- conda/env/yml/pcgr.yml | 2 +- conda/env/yml/pcgrr.yml | 2 +- conda/env/yml/pkgdown.yml | 2 +- conda/recipe/pcgr/meta.yaml | 2 +- conda/recipe/pcgrr/meta.yaml | 2 +- pcgr/_version.py | 2 +- pcgrr/DESCRIPTION | 2 +- pcgrr/vignettes/installation.Rmd | 2 +- pyproject.toml | 2 +- 11 files changed, 11 insertions(+), 11 deletions(-) diff --git a/.bumpversion.cfg b/.bumpversion.cfg index c61b688b..6c78f574 100644 --- a/.bumpversion.cfg +++ b/.bumpversion.cfg @@ -1,5 +1,5 @@ [bumpversion] -current_version = 2.0.2 +current_version = 2.0.3 commit = True tag = False parse = (?P\d+)\.(?P\d+)\.(?P\d+)(\.(?P\d+))? diff --git a/.github/workflows/build_conda_recipes.yaml b/.github/workflows/build_conda_recipes.yaml index fa7bb8a9..aaf3085c 100644 --- a/.github/workflows/build_conda_recipes.yaml +++ b/.github/workflows/build_conda_recipes.yaml @@ -10,7 +10,7 @@ env: recipe_path: conda/recipe env_yml_path: conda/env/yml env_lock_path: conda/env/lock - VERSION: '2.0.2' # versioned by bump2version + VERSION: '2.0.3' # versioned by bump2version jobs: build_pcgrr_conda_pkg: # When merging to one of the branches above and the commit message matches diff --git a/conda/env/yml/pcgr.yml b/conda/env/yml/pcgr.yml index 1bb53c71..2df69dee 100644 --- a/conda/env/yml/pcgr.yml +++ b/conda/env/yml/pcgr.yml @@ -6,7 +6,7 @@ channels: - conda-forge dependencies: - - pcgr::pcgr ==2.0.2 # versioned by bump2version + - pcgr::pcgr ==2.0.3 # versioned by bump2version - bedtools - bcftools - cyvcf2 diff --git a/conda/env/yml/pcgrr.yml b/conda/env/yml/pcgrr.yml index 4c6a7f09..51dc7930 100644 --- a/conda/env/yml/pcgrr.yml +++ b/conda/env/yml/pcgrr.yml @@ -7,7 +7,7 @@ channels: dependencies: - python - - pcgr::r-pcgrr ==2.0.2 # versioned by bump2version + - pcgr::r-pcgrr ==2.0.3 # versioned by bump2version - pcgr::r-cpsr - r-argparse - bioconductor-bsgenome.hsapiens.ucsc.hg38 diff --git a/conda/env/yml/pkgdown.yml b/conda/env/yml/pkgdown.yml index a33dfac3..0604c27a 100644 --- a/conda/env/yml/pkgdown.yml +++ b/conda/env/yml/pkgdown.yml @@ -4,7 +4,7 @@ channels: - bioconda - conda-forge dependencies: - - pcgr::r-pcgrr ==2.0.2 # versioned by bump2version + - pcgr::r-pcgrr ==2.0.3 # versioned by bump2version - r-pkgdown - r-readr - r-glue diff --git a/conda/recipe/pcgr/meta.yaml b/conda/recipe/pcgr/meta.yaml index ccab0b66..590f50c4 100644 --- a/conda/recipe/pcgr/meta.yaml +++ b/conda/recipe/pcgr/meta.yaml @@ -1,6 +1,6 @@ package: name: pcgr - version: 2.0.2 # versioned by bump2version + version: 2.0.3 # versioned by bump2version source: path: ../../.. diff --git a/conda/recipe/pcgrr/meta.yaml b/conda/recipe/pcgrr/meta.yaml index 04db4ac7..97b87322 100644 --- a/conda/recipe/pcgrr/meta.yaml +++ b/conda/recipe/pcgrr/meta.yaml @@ -1,6 +1,6 @@ package: name: r-pcgrr - version: 2.0.2 # versioned by bump2version + version: 2.0.3 # versioned by bump2version source: path: ../../../pcgrr diff --git a/pcgr/_version.py b/pcgr/_version.py index 93d35281..20a5ba4d 100644 --- a/pcgr/_version.py +++ b/pcgr/_version.py @@ -1,2 +1,2 @@ # versioned by bump2version -__version__ = '2.0.2' +__version__ = '2.0.3' diff --git a/pcgrr/DESCRIPTION b/pcgrr/DESCRIPTION index eaf667c1..d4188903 100644 --- a/pcgrr/DESCRIPTION +++ b/pcgrr/DESCRIPTION @@ -1,7 +1,7 @@ Package: pcgrr Type: Package Title: Personal Cancer Genome ReporteR -Version: 2.0.2 +Version: 2.0.3 Authors@R: c(person(given = "Sigve", family = "Nakken", diff --git a/pcgrr/vignettes/installation.Rmd b/pcgrr/vignettes/installation.Rmd index 302e4c9c..0a2c6fe0 100644 --- a/pcgrr/vignettes/installation.Rmd +++ b/pcgrr/vignettes/installation.Rmd @@ -15,7 +15,7 @@ require(glue, include.only = "glue") ```{r vars, echo=FALSE} Sys.setenv(VEP_VERSION = "112") -Sys.setenv(PCGR_VERSION = "2.0.2") +Sys.setenv(PCGR_VERSION = "2.0.3") Sys.setenv(BUNDLE_VERSION = "20240621") VEP_VERSION <- Sys.getenv("VEP_VERSION") PCGR_VERSION <- Sys.getenv("PCGR_VERSION") diff --git a/pyproject.toml b/pyproject.toml index fda4ca80..6caaf9f7 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -5,7 +5,7 @@ build-backend = "setuptools.build_meta" [project] name = "pcgr" -version = "2.0.2" # versioned by bump2version +version = "2.0.3" # versioned by bump2version description = "Personal Cancer Genome Reporter (PCGR) - variant interpretation for precision cancer medicine" authors = [ {name = "Sigve Nakken", email = "sigven@gmail.com"},