CCPBioSim Bristol Training Week
Event Dates: From Monday April 9th 2018 to Friday 13th April 2018
Please fill in this feedback survey when you complete each workshop.
University of Bristol, Cantock's Close, Bristol, BS8 1TS
(instructions to find the room)
This CCPBioSim training week is a series of half day training workshops aimed at training biomolecular scientists in current methodologies and tools. Each course is aimed at a different topic and is booked individually.
You can talk with each other and the trainers using the workshop etherpad. Please keep discussion respectful and remember the code of conduct.
- 11.00 - 13.00 : Python for Biomolecular Modellers Part 1
- 13.00 - 14.30 : Lunch
- 14.30 - 17.30 : Python for Biomolecular Modellers Part 2
- 10.00 - 13.00 : Setting up and Running Molecular Dynamics Simulations: Good Practice and Pitfalls
- 13.00 - 14.30 : Lunch
- 14.30 - 17.30 : Tackling Protein alchemistry with FESetup and Sire SOMD
- 10.00 - 13.00 : Alchemical Free Energy Simulation Analysis with analyse_freenrg
- 13.00 - 14.30 : Lunch
- 14.30 - 17.30 : ISAMBARD: A Python-based API for Biomolecular Structure Analysis and Parametric Design of Protein Structures
- 10.00 - 13.00 : Introduction to BioSimSpace
- 13.00 - 14.30 : Lunch
- 14.30 - 17.30 : Visualising Binding Free Energies Using Swap-based Methods
- 10.00 - 13.00 : QM/MM Modelling of Enzyme Reactions
- 13.00 - 14.30 : Lunch
- 14.30 - 17.30 : Calculating Water Affinities in Protein Binding Sites with Grand Canonical Monte Carlo and ProtoMS