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TaxonKit v0.13.0

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@shenwei356 shenwei356 released this 22 Sep 08:33
· 51 commits to master since this release

Changes

  • TaxonKit v0.13.0 Github Releases (by Release)
    • taxonkit reformat:
      • add a new placeholder {K} for rank kingdom. #64
      • do not panic for invalid TaxIds, e.g., the column name, when using -I--taxid-field.
    • taxonkit create-taxdump:
      • fix merged.dmp and delnodes.dmp. Thanks to @apcamargo ! gtdb-taxdump/issues/2.
      • fix bug of handling non-GTDB data when using -A/--field-accession and no rank names given:
        the colname of the accession column would be treated as one of the ranks, which messed up all the ranks.
      • fix the default option value of --field-accession-re which wrongly remove prefix like Sp_. #65
    • taxonkit list:
      • fix warning message of merged taxids.