diff --git a/_distrib_a_s_t_plugin_8cpp__incl.map b/_distrib_a_s_t_plugin_8cpp__incl.map index 98f01b0b1..3438b32f7 100644 --- a/_distrib_a_s_t_plugin_8cpp__incl.map +++ b/_distrib_a_s_t_plugin_8cpp__incl.map @@ -1,15 +1,16 @@ - - + + - + - - + + + - - + + @@ -18,55 +19,55 @@ - + - - - + + + - + - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/_distrib_a_s_t_plugin_8cpp__incl.md5 b/_distrib_a_s_t_plugin_8cpp__incl.md5 index 697cd8211..68791c791 100644 --- a/_distrib_a_s_t_plugin_8cpp__incl.md5 +++ b/_distrib_a_s_t_plugin_8cpp__incl.md5 @@ -1 +1 @@ -ea809c3391a556c07888b0d0edddf141 \ No newline at end of file +9f367cf27d36511f932cd579a9b6ffbc \ No newline at end of file diff --git a/_distrib_a_s_t_plugin_8cpp__incl.svg b/_distrib_a_s_t_plugin_8cpp__incl.svg index 7a3871a9f..3db347b07 100644 --- a/_distrib_a_s_t_plugin_8cpp__incl.svg +++ b/_distrib_a_s_t_plugin_8cpp__incl.svg @@ -46,7 +46,7 @@ if (edges && edges.length) { @@ -54,13 +54,13 @@ var sectionId = 'dynsection-0'; DistribASTPlugin.cpp - + Node1 - -DistribASTPlugin.cpp + +DistribASTPlugin.cpp @@ -68,17 +68,17 @@ var sectionId = 'dynsection-0'; Node2 - -sbml/packages/distrib -/extension/DistribASTPlugin.h + +sbml/packages/distrib +/extension/DistribASTPlugin.h Node1->Node2 - - + + @@ -92,23 +92,23 @@ var sectionId = 'dynsection-0'; Node1->Node7 - - + + Node42 - -sbml/SBMLNamespaces.h + +sbml/SBMLNamespaces.h Node1->Node42 - - + + @@ -122,8 +122,8 @@ var sectionId = 'dynsection-0'; Node1->Node43 - - + + @@ -137,39 +137,54 @@ var sectionId = 'dynsection-0'; Node1->Node54 - + Node55 - -sbml/packages/distrib -/extension/DistribExtension.h + +sbml/packages/distrib +/extension/DistribExtension.h Node1->Node55 - - + + + + + +Node71 + + +sbml/units/UnitFormulaFormatter.h + + + + + +Node1->Node71 + + Node3 - -sbml/extension/ASTBasePlugin.h + +sbml/extension/ASTBasePlugin.h Node2->Node3 - - + + @@ -183,44 +198,44 @@ var sectionId = 'dynsection-0'; Node2->Node4 - - + + Node5 - -string + +string Node2->Node5 - - + + Node6 - -map + +map Node2->Node6 - - + + Node7->Node3 - - + + @@ -234,7 +249,7 @@ var sectionId = 'dynsection-0'; Node7->Node8 - + @@ -249,8 +264,8 @@ var sectionId = 'dynsection-0'; Node7->Node10 - - + + @@ -324,8 +339,8 @@ var sectionId = 'dynsection-0'; Node7->Node20 - - + + @@ -340,23 +355,23 @@ var sectionId = 'dynsection-0'; Node7->Node22 - - + + Node25 - -sbml/SyntaxChecker.h + +sbml/SyntaxChecker.h Node7->Node25 - - + + @@ -384,61 +399,61 @@ var sectionId = 'dynsection-0'; Node11 - -sbml/common/libsbml --config.h + +sbml/common/libsbml +-config.h Node10->Node11 - - + + Node11->Node9 - - + + Node12 - -sbml/common/libsbml --config-common.h + +sbml/common/libsbml +-config-common.h Node11->Node12 - - + + Node13 - -sbml/common/libsbml --version.h + +sbml/common/libsbml +-version.h Node11->Node13 - - + + Node13->Node8 - - + + @@ -533,8 +548,8 @@ var sectionId = 'dynsection-0'; Node20->Node5 - - + + @@ -567,16 +582,16 @@ var sectionId = 'dynsection-0'; Node23 - -stdexcept + +stdexcept Node20->Node23 - - + + @@ -608,8 +623,8 @@ var sectionId = 'dynsection-0'; Node24->Node5 - - + + @@ -626,656 +641,656 @@ var sectionId = 'dynsection-0'; Node25->Node5 - - + + Node25->Node8 - + Node26 - -sbml/SBase.h + +sbml/SBase.h Node25->Node26 - - + + Node47 - -sbml/util/util.h + +sbml/util/util.h Node25->Node47 - - + + Node26->Node5 - - + + Node26->Node8 - + Node26->Node10 - + Node26->Node23 - - + + Node26->Node25 - - + + Node27 - -sbml/SBMLTypeCodes.h + +sbml/SBMLTypeCodes.h Node26->Node27 - - + + Node28 - -sbml/annotation/RDFAnnotation.h + +sbml/annotation/RDFAnnotation.h Node26->Node28 - - + + Node31 - -sbml/util/List.h + +sbml/util/List.h Node26->Node31 - - + + Node33 - -sbml/xml/XMLNode.h + +sbml/xml/XMLNode.h Node26->Node33 - - + + Node41 - -sbml/annotation/CVTerm.h + +sbml/annotation/CVTerm.h Node26->Node41 - - + + Node26->Node42 - - + + Node49 - -sbml/SBMLConstructorException.h + +sbml/SBMLConstructorException.h Node26->Node49 - - + + Node50 - -algorithm + +algorithm Node26->Node50 - - + + Node51 - -sbml/ExpectedAttributes.h + +sbml/ExpectedAttributes.h Node26->Node51 - - + + Node52 - -sbml/xml/XMLError.h + +sbml/xml/XMLError.h Node26->Node52 - - + + Node27->Node8 - - + + Node27->Node11 - - + + Node29 - -RDFAnnotationParser.h + +RDFAnnotationParser.h Node28->Node29 - - + + Node29->Node5 - - + + Node29->Node8 - + Node29->Node10 - + Node29->Node20 - - + + Node30 - -sbml/annotation/ModelHistory.h + +sbml/annotation/ModelHistory.h Node29->Node30 - - + + Node35 - -cstdlib + +cstdlib Node29->Node35 - - + + Node38 - -limits + +limits Node29->Node38 - - + + Node39 - -iomanip + +iomanip Node29->Node39 - - + + Node40 - -sstream + +sstream Node29->Node40 - - + + Node30->Node5 - - + + Node30->Node8 - + Node30->Node10 - + Node30->Node22 - - + + Node30->Node31 - - + + Node30->Node33 - - + + Node36 - -sbml/annotation/Date.h + +sbml/annotation/Date.h Node30->Node36 - - + + Node37 - -sbml/annotation/ModelCreator.h + +sbml/annotation/ModelCreator.h Node30->Node37 - - + + Node31->Node8 - + Node32 - -string.h + +string.h Node31->Node32 - - + + Node33->Node4 - - + + Node33->Node10 - + Node33->Node21 - + Node34 - -sbml/xml/XMLToken.h + +sbml/xml/XMLToken.h Node33->Node34 - - + + Node33->Node35 - - + + Node34->Node5 - - + + Node34->Node10 - + Node34->Node20 - - + + Node34->Node21 - + Node34->Node34 - - + + Node36->Node5 - - + + Node36->Node8 - + Node36->Node10 - - + + Node36->Node22 - - + + Node36->Node31 - - + + Node36->Node33 - - + + Node37->Node5 - - + + Node37->Node8 - + Node37->Node10 - + Node37->Node22 - - + + Node37->Node31 - - + + Node37->Node33 - - + + Node41->Node5 - - + + Node41->Node8 - - + + Node41->Node10 - - + + Node41->Node20 - + Node41->Node22 - - + + Node41->Node35 - - + + Node41->Node38 - - + + Node41->Node39 - - + + Node41->Node40 - - + + Node42->Node5 - - + + Node42->Node23 - - + + Node42->Node43 - - + + Node44 - -sbml/common/common.h + +sbml/common/common.h Node42->Node44 - - + + @@ -1286,8 +1301,8 @@ var sectionId = 'dynsection-0'; Node43->Node5 - - + + @@ -1310,206 +1325,206 @@ var sectionId = 'dynsection-0'; Node44->Node8 - - + + Node44->Node11 - - + + Node45 - -stdio.h + +stdio.h Node44->Node45 - - + + Node46 - -sbml/util/memory.h + +sbml/util/memory.h Node44->Node46 - - + + Node44->Node47 - - + + Node47->Node8 - - + + Node47->Node45 - - + + Node48 - -stdarg.h + +stdarg.h Node47->Node48 - - + + Node49->Node5 - - + + Node49->Node8 - - + + Node49->Node23 - - + + Node49->Node42 - - + + Node49->Node50 - - + + Node51->Node4 - - + + Node51->Node5 - - + + Node51->Node8 - - + + Node51->Node23 - - + + Node51->Node50 - - + + Node52->Node5 - - + + Node52->Node10 - - + + Node52->Node21 - + Node52->Node22 - + Node52->Node45 - - + + Node52->Node47 - - + + Node53 - -iosfwd + +iosfwd Node52->Node53 - - + + Node54->Node3 - - + + Node54->Node4 - - + + Node54->Node5 - - + + @@ -1544,480 +1559,480 @@ var sectionId = 'dynsection-0'; Node55->Node4 - - + + Node55->Node8 - - + + Node55->Node27 - - + + Node56 - -sbml/extension/SBMLExtension.h + +sbml/extension/SBMLExtension.h Node55->Node56 - - + + Node66 - -sbml/extension/SBMLExtension -Namespaces.h + +sbml/extension/SBMLExtension +Namespaces.h Node55->Node66 - - + + Node70 - -sbml/extension/SBMLExtension -Register.h + +sbml/extension/SBMLExtension +Register.h Node55->Node70 - - + + Node56->Node3 - - + + Node56->Node4 - - + + Node56->Node12 - - + + Node57 - -sbml/extension/SBasePlugin -CreatorBase.h + +sbml/extension/SBasePlugin +CreatorBase.h Node56->Node57 - - + + Node65 - -sbml/extension/SBaseExtension -Point.h + +sbml/extension/SBaseExtension +Point.h Node56->Node65 - - + + Node57->Node42 - - + + Node58 - -sbml/SBMLDocument.h + +sbml/SBMLDocument.h Node57->Node58 - - + + Node57->Node65 - - + + Node58->Node6 - - + + Node58->Node8 - - + + Node58->Node10 - - + + Node58->Node26 - - + + Node58->Node53 - - + + Node59 - -sbml/SBMLError.h + +sbml/SBMLError.h Node58->Node59 - - + + Node60 - -sbml/SBMLErrorLog.h + +sbml/SBMLErrorLog.h Node58->Node60 - - + + Node64 - -sbml/SBMLTransforms.h + +sbml/SBMLTransforms.h Node58->Node64 - - + + Node59->Node8 - - + + Node59->Node42 - - + + Node59->Node52 - - + + Node60->Node4 - - + + Node60->Node8 - - + + Node60->Node52 - - + + Node60->Node59 - - + + Node61 - -sbml/xml/XMLErrorLog.h + +sbml/xml/XMLErrorLog.h Node60->Node61 - - + + Node61->Node4 - - + + Node61->Node5 - - + + Node61->Node10 - - + + Node61->Node21 - + Node61->Node52 - - + + Node62 - -iostream + +iostream Node61->Node62 - - + + Node63 - -list + +list Node61->Node63 - - + + Node65->Node5 - - + + Node65->Node8 - - + + Node65->Node10 - - + + Node66->Node5 - - + + Node66->Node23 - - + + Node66->Node42 - - + + Node66->Node44 - - + + Node67 - -sbml/extension/SBMLExtension -Registry.h + +sbml/extension/SBMLExtension +Registry.h Node66->Node67 - - + + Node68 - -sbml/extension/SBMLExtension -Exception.h + +sbml/extension/SBMLExtension +Exception.h Node66->Node68 - - + + Node69 - -sbml/extension/ISBMLExtension -Namespaces.h + +sbml/extension/ISBMLExtension +Namespaces.h Node66->Node69 - - + + Node67->Node3 - - + + Node67->Node6 - - + + Node67->Node56 - - + + Node67->Node63 - - + + Node68->Node5 - - + + Node68->Node23 - - + + Node68->Node44 - - + + Node70->Node56 - - + + Node70->Node67 - - + + diff --git a/_distrib_a_s_t_plugin_8cpp__incl_org.svg b/_distrib_a_s_t_plugin_8cpp__incl_org.svg index 239fa82a5..e17e7d677 100644 --- a/_distrib_a_s_t_plugin_8cpp__incl_org.svg +++ b/_distrib_a_s_t_plugin_8cpp__incl_org.svg @@ -4,17 +4,17 @@ - + DistribASTPlugin.cpp - + Node1 - -DistribASTPlugin.cpp + +DistribASTPlugin.cpp @@ -22,17 +22,17 @@ Node2 - -sbml/packages/distrib -/extension/DistribASTPlugin.h + +sbml/packages/distrib +/extension/DistribASTPlugin.h Node1->Node2 - - + + @@ -46,23 +46,23 @@ Node1->Node7 - - + + Node42 - -sbml/SBMLNamespaces.h + +sbml/SBMLNamespaces.h Node1->Node42 - - + + @@ -76,8 +76,8 @@ Node1->Node43 - - + + @@ -91,39 +91,54 @@ Node1->Node54 - + Node55 - -sbml/packages/distrib -/extension/DistribExtension.h + +sbml/packages/distrib +/extension/DistribExtension.h Node1->Node55 - - + + + + + +Node71 + + +sbml/units/UnitFormulaFormatter.h + + + + + +Node1->Node71 + + Node3 - -sbml/extension/ASTBasePlugin.h + +sbml/extension/ASTBasePlugin.h Node2->Node3 - - + + @@ -137,44 +152,44 @@ Node2->Node4 - - + + Node5 - -string + +string Node2->Node5 - - + + Node6 - -map + +map Node2->Node6 - - + + Node7->Node3 - - + + @@ -188,7 +203,7 @@ Node7->Node8 - + @@ -203,8 +218,8 @@ Node7->Node10 - - + + @@ -278,8 +293,8 @@ Node7->Node20 - - + + @@ -294,23 +309,23 @@ Node7->Node22 - - + + Node25 - -sbml/SyntaxChecker.h + +sbml/SyntaxChecker.h Node7->Node25 - - + + @@ -338,61 +353,61 @@ Node11 - -sbml/common/libsbml --config.h + +sbml/common/libsbml +-config.h Node10->Node11 - - + + Node11->Node9 - - + + Node12 - -sbml/common/libsbml --config-common.h + +sbml/common/libsbml +-config-common.h Node11->Node12 - - + + Node13 - -sbml/common/libsbml --version.h + +sbml/common/libsbml +-version.h Node11->Node13 - - + + Node13->Node8 - - + + @@ -487,8 +502,8 @@ Node20->Node5 - - + + @@ -521,16 +536,16 @@ Node23 - -stdexcept + +stdexcept Node20->Node23 - - + + @@ -562,8 +577,8 @@ Node24->Node5 - - + + @@ -580,656 +595,656 @@ Node25->Node5 - - + + Node25->Node8 - + Node26 - -sbml/SBase.h + +sbml/SBase.h Node25->Node26 - - + + Node47 - -sbml/util/util.h + +sbml/util/util.h Node25->Node47 - - + + Node26->Node5 - - + + Node26->Node8 - + Node26->Node10 - + Node26->Node23 - - + + Node26->Node25 - - + + Node27 - -sbml/SBMLTypeCodes.h + +sbml/SBMLTypeCodes.h Node26->Node27 - - + + Node28 - -sbml/annotation/RDFAnnotation.h + +sbml/annotation/RDFAnnotation.h Node26->Node28 - - + + Node31 - -sbml/util/List.h + +sbml/util/List.h Node26->Node31 - - + + Node33 - -sbml/xml/XMLNode.h + +sbml/xml/XMLNode.h Node26->Node33 - - + + Node41 - -sbml/annotation/CVTerm.h + +sbml/annotation/CVTerm.h Node26->Node41 - - + + Node26->Node42 - - + + Node49 - -sbml/SBMLConstructorException.h + +sbml/SBMLConstructorException.h Node26->Node49 - - + + Node50 - -algorithm + +algorithm Node26->Node50 - - + + Node51 - -sbml/ExpectedAttributes.h + +sbml/ExpectedAttributes.h Node26->Node51 - - + + Node52 - -sbml/xml/XMLError.h + +sbml/xml/XMLError.h Node26->Node52 - - + + Node27->Node8 - - + + Node27->Node11 - - + + Node29 - -RDFAnnotationParser.h + +RDFAnnotationParser.h Node28->Node29 - - + + Node29->Node5 - - + + Node29->Node8 - + Node29->Node10 - + Node29->Node20 - - + + Node30 - -sbml/annotation/ModelHistory.h + +sbml/annotation/ModelHistory.h Node29->Node30 - - + + Node35 - -cstdlib + +cstdlib Node29->Node35 - - + + Node38 - -limits + +limits Node29->Node38 - - + + Node39 - -iomanip + +iomanip Node29->Node39 - - + + Node40 - -sstream + +sstream Node29->Node40 - - + + Node30->Node5 - - + + Node30->Node8 - + Node30->Node10 - + Node30->Node22 - - + + Node30->Node31 - - + + Node30->Node33 - - + + Node36 - -sbml/annotation/Date.h + +sbml/annotation/Date.h Node30->Node36 - - + + Node37 - -sbml/annotation/ModelCreator.h + +sbml/annotation/ModelCreator.h Node30->Node37 - - + + Node31->Node8 - + Node32 - -string.h + +string.h Node31->Node32 - - + + Node33->Node4 - - + + Node33->Node10 - + Node33->Node21 - + Node34 - -sbml/xml/XMLToken.h + +sbml/xml/XMLToken.h Node33->Node34 - - + + Node33->Node35 - - + + Node34->Node5 - - + + Node34->Node10 - + Node34->Node20 - - + + Node34->Node21 - + Node34->Node34 - - + + Node36->Node5 - - + + Node36->Node8 - + Node36->Node10 - - + + Node36->Node22 - - + + Node36->Node31 - - + + Node36->Node33 - - + + Node37->Node5 - - + + Node37->Node8 - + Node37->Node10 - + Node37->Node22 - - + + Node37->Node31 - - + + Node37->Node33 - - + + Node41->Node5 - - + + Node41->Node8 - - + + Node41->Node10 - - + + Node41->Node20 - + Node41->Node22 - - + + Node41->Node35 - - + + Node41->Node38 - - + + Node41->Node39 - - + + Node41->Node40 - - + + Node42->Node5 - - + + Node42->Node23 - - + + Node42->Node43 - - + + Node44 - -sbml/common/common.h + +sbml/common/common.h Node42->Node44 - - + + @@ -1240,8 +1255,8 @@ Node43->Node5 - - + + @@ -1264,206 +1279,206 @@ Node44->Node8 - - + + Node44->Node11 - - + + Node45 - -stdio.h + +stdio.h Node44->Node45 - - + + Node46 - -sbml/util/memory.h + +sbml/util/memory.h Node44->Node46 - - + + Node44->Node47 - - + + Node47->Node8 - - + + Node47->Node45 - - + + Node48 - -stdarg.h + +stdarg.h Node47->Node48 - - + + Node49->Node5 - - + + Node49->Node8 - - + + Node49->Node23 - - + + Node49->Node42 - - + + Node49->Node50 - - + + Node51->Node4 - - + + Node51->Node5 - - + + Node51->Node8 - - + + Node51->Node23 - - + + Node51->Node50 - - + + Node52->Node5 - - + + Node52->Node10 - - + + Node52->Node21 - + Node52->Node22 - + Node52->Node45 - - + + Node52->Node47 - - + + Node53 - -iosfwd + +iosfwd Node52->Node53 - - + + Node54->Node3 - - + + Node54->Node4 - - + + Node54->Node5 - - + + @@ -1498,480 +1513,480 @@ Node55->Node4 - - + + Node55->Node8 - - + + Node55->Node27 - - + + Node56 - -sbml/extension/SBMLExtension.h + +sbml/extension/SBMLExtension.h Node55->Node56 - - + + Node66 - -sbml/extension/SBMLExtension -Namespaces.h + +sbml/extension/SBMLExtension +Namespaces.h Node55->Node66 - - + + Node70 - -sbml/extension/SBMLExtension -Register.h + +sbml/extension/SBMLExtension +Register.h Node55->Node70 - - + + Node56->Node3 - - + + Node56->Node4 - - + + Node56->Node12 - - + + Node57 - -sbml/extension/SBasePlugin -CreatorBase.h + +sbml/extension/SBasePlugin +CreatorBase.h Node56->Node57 - - + + Node65 - -sbml/extension/SBaseExtension -Point.h + +sbml/extension/SBaseExtension +Point.h Node56->Node65 - - + + Node57->Node42 - - + + Node58 - -sbml/SBMLDocument.h + +sbml/SBMLDocument.h Node57->Node58 - - + + Node57->Node65 - - + + Node58->Node6 - - + + Node58->Node8 - - + + Node58->Node10 - - + + Node58->Node26 - - + + Node58->Node53 - - + + Node59 - -sbml/SBMLError.h + +sbml/SBMLError.h Node58->Node59 - - + + Node60 - -sbml/SBMLErrorLog.h + +sbml/SBMLErrorLog.h Node58->Node60 - - + + Node64 - -sbml/SBMLTransforms.h + +sbml/SBMLTransforms.h Node58->Node64 - - + + Node59->Node8 - - + + Node59->Node42 - - + + Node59->Node52 - - + + Node60->Node4 - - + + Node60->Node8 - - + + Node60->Node52 - - + + Node60->Node59 - - + + Node61 - -sbml/xml/XMLErrorLog.h + +sbml/xml/XMLErrorLog.h Node60->Node61 - - + + Node61->Node4 - - + + Node61->Node5 - - + + Node61->Node10 - - + + Node61->Node21 - + Node61->Node52 - - + + Node62 - -iostream + +iostream Node61->Node62 - - + + Node63 - -list + +list Node61->Node63 - - + + Node65->Node5 - - + + Node65->Node8 - - + + Node65->Node10 - - + + Node66->Node5 - - + + Node66->Node23 - - + + Node66->Node42 - - + + Node66->Node44 - - + + Node67 - -sbml/extension/SBMLExtension -Registry.h + +sbml/extension/SBMLExtension +Registry.h Node66->Node67 - - + + Node68 - -sbml/extension/SBMLExtension -Exception.h + +sbml/extension/SBMLExtension +Exception.h Node66->Node68 - - + + Node69 - -sbml/extension/ISBMLExtension -Namespaces.h + +sbml/extension/ISBMLExtension +Namespaces.h Node66->Node69 - - + + Node67->Node3 - - + + Node67->Node6 - - + + Node67->Node56 - - + + Node67->Node63 - - + + Node68->Node5 - - + + Node68->Node23 - - + + Node68->Node44 - - + + Node70->Node56 - - + + Node70->Node67 - - + +