From 68988c826f3bfb9ca044e2359b8c4c84f0b37cdf Mon Sep 17 00:00:00 2001 From: luciansmith Date: Mon, 5 Aug 2024 18:34:37 +0000 Subject: [PATCH] deploy: f7f8ff9324409f89ec6d2fe9394442640c5c8966 --- ..._l_http_resolver_example_8cpp-example.html | 2 +- add_layout_8cpp-example.html | 2 +- convert_layout_8cpp-example.html | 16 +- example1-_l3_8cpp-example.html | 18 +- example1_8cpp-example.html | 18 +- example2-_l3_8cpp-example.html | 14 +- example2_8cpp-example.html | 14 +- example3-_l3_8cpp-example.html | 16 +- example3_8cpp-example.html | 16 +- fbc_example1_8cpp-example.html | 8 +- groups_example1_8cpp-example.html | 4 +- groups_example2_8cpp-example.html | 22 +- libsbml-package-stylesheet.css | 2416 ++++++++--------- qual_example1_8cpp-example.html | 8 +- spec_example1_8cpp-example.html | 6 +- spec_example2_8cpp-example.html | 6 +- spec_example3_8cpp-example.html | 18 +- spec_example4_8cpp-example.html | 16 +- 18 files changed, 1310 insertions(+), 1310 deletions(-) diff --git a/_s_b_m_l_http_resolver_example_8cpp-example.html b/_s_b_m_l_http_resolver_example_8cpp-example.html index 1eed0a678..48321d7b9 100644 --- a/_s_b_m_l_http_resolver_example_8cpp-example.html +++ b/_s_b_m_l_http_resolver_example_8cpp-example.html @@ -379,7 +379,7 @@
SBMLTypes.h
Include all SBML types in a single header file.
SBMLUri.h
Definition of SBMLUri, the utility class for handling URIs.
CompSBMLDocumentPlugin
Definition: CompSBMLDocumentPlugin.h:94
-
CompSBMLDocumentPlugin::createExternalModelDefinition
ExternalModelDefinition * createExternalModelDefinition()
Creates a ExternalModelDefinition object, adds it to the end of the ExternalModelDefinition objects l...
Definition: CompSBMLDocumentPlugin.cpp:544
+
CompSBMLDocumentPlugin::createExternalModelDefinition
ExternalModelDefinition * createExternalModelDefinition()
Creates a ExternalModelDefinition object, adds it to the end of the ExternalModelDefinition objects l...
Definition: CompSBMLDocumentPlugin.cpp:536
ExternalModelDefinition
Definition: ExternalModelDefinition.h:128
ExternalModelDefinition::setSource
virtual int setSource(const std::string &source)
Sets the value of the "source" attribute of this ExternalModelDefinition.
Definition: ExternalModelDefinition.cpp:333
ExternalModelDefinition::getReferencedModel
virtual Model * getReferencedModel()
Resolves and returns the referenced Model object of this ExternalModelDefinition.
Definition: ExternalModelDefinition.cpp:573
diff --git a/add_layout_8cpp-example.html b/add_layout_8cpp-example.html index e93806c05..8be76f86d 100644 --- a/add_layout_8cpp-example.html +++ b/add_layout_8cpp-example.html @@ -206,7 +206,7 @@
Layout::setId
virtual int setId(const std::string &sid)
Sets the value of the "id" attribute of this Layout.
Definition: Layout.cpp:454
Layout::setDimensions
void setDimensions(const Dimensions *dimensions)
Sets the dimensions of the layout.
Definition: Layout.cpp:520
LayoutModelPlugin
Definition: LayoutModelPlugin.h:68
-
LayoutModelPlugin::createLayout
Layout * createLayout()
Creates a new layout object and adds it to the list of layout objects and returns it.
Definition: LayoutModelPlugin.cpp:480
+
LayoutModelPlugin::createLayout
Layout * createLayout()
Creates a new layout object and adds it to the list of layout objects and returns it.
Definition: LayoutModelPlugin.cpp:476
LayoutPkgNamespaces
Model
Definition: Model.h:485
SBMLDocument
Definition: SBMLDocument.h:349
diff --git a/convert_layout_8cpp-example.html b/convert_layout_8cpp-example.html index 5cb1e12fc..a3db960b3 100644 --- a/convert_layout_8cpp-example.html +++ b/convert_layout_8cpp-example.html @@ -1004,7 +1004,7 @@
GlobalRenderInformation::getListOfStyles
const ListOfGlobalStyles * getListOfStyles() const
Returns the ListOfGlobalStyles from this GlobalRenderInformation.
Definition: GlobalRenderInformation.cpp:188
GlobalStyle
Definition: GlobalStyle.h:82
GradientBase
Definition: GradientBase.h:114
-
GradientBase::getTypeCode
virtual int getTypeCode() const
Returns the libSBML type code for this GradientBase object.
Definition: GradientBase.cpp:655
+
GradientBase::getTypeCode
virtual int getTypeCode() const
Returns the libSBML type code for this GradientBase object.
Definition: GradientBase.cpp:651
GradientBase::getListOfGradientStops
const ListOfGradientStops * getListOfGradientStops() const
Returns the ListOfGradientStops from this GradientBase.
GradientStop
Definition: GradientStop.h:92
GraphicalObject
Definition: GraphicalObject.h:75
@@ -1030,7 +1030,7 @@
ListOfColorDefinitions
Definition: ListOfColorDefinitions.h:74
ListOfColorDefinitions::get
virtual ColorDefinition * get(unsigned int n)
Get a ColorDefinition from the ListOfColorDefinitions.
Definition: ListOfColorDefinitions.cpp:169
ListOfCompartmentGlyphs
Definition: Layout.h:90
-
ListOfCompartmentGlyphs::get
virtual CompartmentGlyph * get(unsigned int n)
Get a CompartmentGlyph from the ListOfCompartmentGlyphs.
Definition: Layout.cpp:2126
+
ListOfCompartmentGlyphs::get
virtual CompartmentGlyph * get(unsigned int n)
Get a CompartmentGlyph from the ListOfCompartmentGlyphs.
Definition: Layout.cpp:2106
ListOfCurveElements
Definition: ListOfCurveElements.h:84
ListOfCurveElements::get
virtual RenderPoint * get(unsigned int n)
Get a RenderPoint from the ListOfCurveElements.
Definition: ListOfCurveElements.cpp:200
ListOfDrawables
Definition: ListOfDrawables.h:92
@@ -1047,7 +1047,7 @@
ListOfGraphicalObjects::get
virtual GraphicalObject * get(unsigned int n)
Get a GraphicalObject from the ListOfGraphicalObjects.
Definition: GraphicalObject.cpp:1138
ListOf::size
unsigned int size() const
Returns number of items in this ListOf list.
Definition: ListOf.cpp:380
ListOfLayouts
Definition: Layout.h:1582
-
ListOfLayouts::get
virtual Layout * get(unsigned int n)
Get a Layout from the ListOfLayouts.
Definition: Layout.cpp:1944
+
ListOfLayouts::get
virtual Layout * get(unsigned int n)
Get a Layout from the ListOfLayouts.
Definition: Layout.cpp:1924
ListOfLineEndings
Definition: ListOfLineEndings.h:80
ListOfLineEndings::get
virtual LineEnding * get(unsigned int n)
Get a LineEnding from the ListOfLineEndings.
Definition: ListOfLineEndings.cpp:171
ListOfLineSegments
Definition: Curve.h:94
@@ -1057,13 +1057,13 @@
ListOfLocalStyles
Definition: ListOfLocalStyles.h:79
ListOfLocalStyles::get
virtual LocalStyle * get(unsigned int n)
Get a LocalStyle from the ListOfLocalStyles.
Definition: ListOfLocalStyles.cpp:159
ListOfReactionGlyphs
Definition: Layout.h:445
-
ListOfReactionGlyphs::get
virtual ReactionGlyph * get(unsigned int n)
Get a ReactionGlyph from the ListOfReactionGlyphs.
Definition: Layout.cpp:2450
+
ListOfReactionGlyphs::get
virtual ReactionGlyph * get(unsigned int n)
Get a ReactionGlyph from the ListOfReactionGlyphs.
Definition: Layout.cpp:2430
ListOfSpeciesGlyphs
Definition: Layout.h:268
-
ListOfSpeciesGlyphs::get
virtual SpeciesGlyph * get(unsigned int n)
Get a SpeciesGlyph from the ListOfSpeciesGlyphs.
Definition: Layout.cpp:2278
+
ListOfSpeciesGlyphs::get
virtual SpeciesGlyph * get(unsigned int n)
Get a SpeciesGlyph from the ListOfSpeciesGlyphs.
Definition: Layout.cpp:2258
ListOfSpeciesReferenceGlyphs
Definition: ReactionGlyph.h:88
-
ListOfSpeciesReferenceGlyphs::get
virtual SpeciesReferenceGlyph * get(unsigned int n)
Get a SpeciesReferenceGlyph from the ListOfSpeciesReferenceGlyphs.
Definition: ReactionGlyph.cpp:909
+
ListOfSpeciesReferenceGlyphs::get
virtual SpeciesReferenceGlyph * get(unsigned int n)
Get a SpeciesReferenceGlyph from the ListOfSpeciesReferenceGlyphs.
Definition: ReactionGlyph.cpp:905
ListOfTextGlyphs
Definition: Layout.h:622
-
ListOfTextGlyphs::get
virtual TextGlyph * get(unsigned int n)
Get a TextGlyph from the ListOfTextGlyphs.
Definition: Layout.cpp:2599
+
ListOfTextGlyphs::get
virtual TextGlyph * get(unsigned int n)
Get a TextGlyph from the ListOfTextGlyphs.
Definition: Layout.cpp:2579
LocalRenderInformation
Definition: LocalRenderInformation.h:72
LocalRenderInformation::getListOfStyles
const ListOfLocalStyles * getListOfStyles() const
Returns the ListOfLocalStyles from this LocalRenderInformation.
Definition: LocalRenderInformation.cpp:191
LocalStyle
Definition: LocalStyle.h:82
@@ -1073,7 +1073,7 @@
RadialGradient
Definition: RadialGradient.h:89
ReactionGlyph
Definition: ReactionGlyph.h:255
ReactionGlyph::getListOfSpeciesReferenceGlyphs
const ListOfSpeciesReferenceGlyphs * getListOfSpeciesReferenceGlyphs() const
Returns the ListOf object that hold the species reference glyphs.
Definition: ReactionGlyph.cpp:353
-
ReactionGlyph::getCurve
const Curve * getCurve() const
Returns the curve object for the reaction glyph.
Definition: ReactionGlyph.cpp:452
+
ReactionGlyph::getCurve
const Curve * getCurve() const
Returns the curve object for the reaction glyph.
Definition: ReactionGlyph.cpp:448
Rectangle
Definition: Rectangle.h:78
RenderCurve
Definition: RenderCurve.h:89
RenderCurve::getListOfElements
const ListOfCurveElements * getListOfElements() const
Returns the ListOfCurveElements from this RenderCurve.
Definition: RenderCurve.cpp:335
diff --git a/example1-_l3_8cpp-example.html b/example1-_l3_8cpp-example.html index 5a1f5ecb2..76583c66b 100644 --- a/example1-_l3_8cpp-example.html +++ b/example1-_l3_8cpp-example.html @@ -479,21 +479,21 @@
CubicBezier::setBasePoint2
void setBasePoint2(const Point *p)
Initializes second base point with a copy of the given point.
Definition: CubicBezier.cpp:457
CubicBezier::setBasePoint1
void setBasePoint1(const Point *p)
Initializes first base point with a copy of the given point.
Definition: CubicBezier.cpp:408
Curve
Definition: Curve.h:217
-
Curve::createLineSegment
LineSegment * createLineSegment()
Creates a new LineSegment and adds it to the end of the list.
Definition: Curve.cpp:364
-
Curve::createCubicBezier
CubicBezier * createCubicBezier()
Creates a new CubicBezier and adds it to the end of the list.
Definition: Curve.cpp:379
+
Curve::createLineSegment
LineSegment * createLineSegment()
Creates a new LineSegment and adds it to the end of the list.
Definition: Curve.cpp:360
+
Curve::createCubicBezier
CubicBezier * createCubicBezier()
Creates a new CubicBezier and adds it to the end of the list.
Definition: Curve.cpp:375
Dimensions
Definition: Dimensions.h:71
GraphicalObject::setId
virtual int setId(const std::string &sid)
Sets the value of the "id" attribute of this GraphicalObject.
Definition: GraphicalObject.cpp:390
GraphicalObject::setBoundingBox
void setBoundingBox(const BoundingBox *bb)
Sets the boundingbox for the GraphicalObject.
Definition: GraphicalObject.cpp:475
GraphicalObject::getId
virtual const std::string & getId() const
Returns the value of the "id" attribute of this GraphicalObject.
Definition: GraphicalObject.cpp:372
Layout
Definition: Layout.h:789
Layout::setId
virtual int setId(const std::string &sid)
Sets the value of the "id" attribute of this Layout.
Definition: Layout.cpp:454
-
Layout::createCompartmentGlyph
CompartmentGlyph * createCompartmentGlyph()
Creates a CompartmentGlyph object, adds it to the end of the compartment glyph objects list and retur...
Definition: Layout.cpp:1385
-
Layout::createReactionGlyph
ReactionGlyph * createReactionGlyph()
Creates a ReactionGlyph object, adds it to the end of the reaction glyph objects list and returns a p...
Definition: Layout.cpp:1417
+
Layout::createCompartmentGlyph
CompartmentGlyph * createCompartmentGlyph()
Creates a CompartmentGlyph object, adds it to the end of the compartment glyph objects list and retur...
Definition: Layout.cpp:1365
+
Layout::createReactionGlyph
ReactionGlyph * createReactionGlyph()
Creates a ReactionGlyph object, adds it to the end of the reaction glyph objects list and returns a p...
Definition: Layout.cpp:1397
Layout::setDimensions
void setDimensions(const Dimensions *dimensions)
Sets the dimensions of the layout.
Definition: Layout.cpp:520
-
Layout::createTextGlyph
TextGlyph * createTextGlyph()
Creates a TextGlyph object, adds it to the end of the text glyph objects list and returns a pointer t...
Definition: Layout.cpp:1448
-
Layout::createSpeciesGlyph
SpeciesGlyph * createSpeciesGlyph()
Creates a SpeciesGlyph object, adds it to the end of the species glyph objects list and returns a poi...
Definition: Layout.cpp:1401
+
Layout::createTextGlyph
TextGlyph * createTextGlyph()
Creates a TextGlyph object, adds it to the end of the text glyph objects list and returns a pointer t...
Definition: Layout.cpp:1428
+
Layout::createSpeciesGlyph
SpeciesGlyph * createSpeciesGlyph()
Creates a SpeciesGlyph object, adds it to the end of the species glyph objects list and returns a poi...
Definition: Layout.cpp:1381
LayoutModelPlugin
Definition: LayoutModelPlugin.h:68
-
LayoutModelPlugin::createLayout
Layout * createLayout()
Creates a new layout object and adds it to the list of layout objects and returns it.
Definition: LayoutModelPlugin.cpp:480
+
LayoutModelPlugin::createLayout
Layout * createLayout()
Creates a new layout object and adds it to the list of layout objects and returns it.
Definition: LayoutModelPlugin.cpp:476
LayoutPkgNamespaces
LineSegment
Definition: LineSegment.h:69
LineSegment::setEnd
void setEnd(const Point *end)
Initializes the end point with a copy of the given Point object.
Definition: LineSegment.cpp:374
@@ -505,9 +505,9 @@
Model::createCompartment
Compartment * createCompartment()
Creates a new Compartment inside this Model and returns it.
Definition: Model.cpp:1558
Point
Definition: Point.h:65
ReactionGlyph
Definition: ReactionGlyph.h:255
-
ReactionGlyph::createSpeciesReferenceGlyph
SpeciesReferenceGlyph * createSpeciesReferenceGlyph()
Creates a new SpeciesReferenceGlyph object, adds it to the end of the list of species reference objec...
Definition: ReactionGlyph.cpp:501
+
ReactionGlyph::createSpeciesReferenceGlyph
SpeciesReferenceGlyph * createSpeciesReferenceGlyph()
Creates a new SpeciesReferenceGlyph object, adds it to the end of the list of species reference objec...
Definition: ReactionGlyph.cpp:497
ReactionGlyph::setReactionId
int setReactionId(const std::string &id)
Sets the id of the associated reaction.
Definition: ReactionGlyph.cpp:324
-
ReactionGlyph::getCurve
const Curve * getCurve() const
Returns the curve object for the reaction glyph.
Definition: ReactionGlyph.cpp:452
+
ReactionGlyph::getCurve
const Curve * getCurve() const
Returns the curve object for the reaction glyph.
Definition: ReactionGlyph.cpp:448
Reaction
Definition: Reaction.h:224
Reaction::createReactant
SpeciesReference * createReactant()
Creates a new SpeciesReference, adds it to this Reaction's list of reactants, and returns it.
Definition: Reaction.cpp:954
Reaction::setReversible
int setReversible(bool value)
Sets the value of the "reversible" attribute of this Reaction.
Definition: Reaction.cpp:599
diff --git a/example1_8cpp-example.html b/example1_8cpp-example.html index 0df9e79c5..45fc74f3b 100644 --- a/example1_8cpp-example.html +++ b/example1_8cpp-example.html @@ -421,8 +421,8 @@
CubicBezier::setBasePoint2
void setBasePoint2(const Point *p)
Initializes second base point with a copy of the given point.
Definition: CubicBezier.cpp:457
CubicBezier::setBasePoint1
void setBasePoint1(const Point *p)
Initializes first base point with a copy of the given point.
Definition: CubicBezier.cpp:408
Curve
Definition: Curve.h:217
-
Curve::createLineSegment
LineSegment * createLineSegment()
Creates a new LineSegment and adds it to the end of the list.
Definition: Curve.cpp:364
-
Curve::createCubicBezier
CubicBezier * createCubicBezier()
Creates a new CubicBezier and adds it to the end of the list.
Definition: Curve.cpp:379
+
Curve::createLineSegment
LineSegment * createLineSegment()
Creates a new LineSegment and adds it to the end of the list.
Definition: Curve.cpp:360
+
Curve::createCubicBezier
CubicBezier * createCubicBezier()
Creates a new CubicBezier and adds it to the end of the list.
Definition: Curve.cpp:375
Dimensions
Definition: Dimensions.h:71
GraphicalObject::setId
virtual int setId(const std::string &sid)
Sets the value of the "id" attribute of this GraphicalObject.
Definition: GraphicalObject.cpp:390
GraphicalObject::setBoundingBox
void setBoundingBox(const BoundingBox *bb)
Sets the boundingbox for the GraphicalObject.
Definition: GraphicalObject.cpp:475
@@ -430,13 +430,13 @@
LayoutExtension::getXmlnsL2
static const std::string & getXmlnsL2()
Returns the XML namespace URI of the SBML Level 2 version of the package implemented by this libSBML ...
Definition: LayoutExtension.cpp:109
Layout
Definition: Layout.h:789
Layout::setId
virtual int setId(const std::string &sid)
Sets the value of the "id" attribute of this Layout.
Definition: Layout.cpp:454
-
Layout::createCompartmentGlyph
CompartmentGlyph * createCompartmentGlyph()
Creates a CompartmentGlyph object, adds it to the end of the compartment glyph objects list and retur...
Definition: Layout.cpp:1385
-
Layout::createReactionGlyph
ReactionGlyph * createReactionGlyph()
Creates a ReactionGlyph object, adds it to the end of the reaction glyph objects list and returns a p...
Definition: Layout.cpp:1417
+
Layout::createCompartmentGlyph
CompartmentGlyph * createCompartmentGlyph()
Creates a CompartmentGlyph object, adds it to the end of the compartment glyph objects list and retur...
Definition: Layout.cpp:1365
+
Layout::createReactionGlyph
ReactionGlyph * createReactionGlyph()
Creates a ReactionGlyph object, adds it to the end of the reaction glyph objects list and returns a p...
Definition: Layout.cpp:1397
Layout::setDimensions
void setDimensions(const Dimensions *dimensions)
Sets the dimensions of the layout.
Definition: Layout.cpp:520
-
Layout::createTextGlyph
TextGlyph * createTextGlyph()
Creates a TextGlyph object, adds it to the end of the text glyph objects list and returns a pointer t...
Definition: Layout.cpp:1448
-
Layout::createSpeciesGlyph
SpeciesGlyph * createSpeciesGlyph()
Creates a SpeciesGlyph object, adds it to the end of the species glyph objects list and returns a poi...
Definition: Layout.cpp:1401
+
Layout::createTextGlyph
TextGlyph * createTextGlyph()
Creates a TextGlyph object, adds it to the end of the text glyph objects list and returns a pointer t...
Definition: Layout.cpp:1428
+
Layout::createSpeciesGlyph
SpeciesGlyph * createSpeciesGlyph()
Creates a SpeciesGlyph object, adds it to the end of the species glyph objects list and returns a poi...
Definition: Layout.cpp:1381
LayoutModelPlugin
Definition: LayoutModelPlugin.h:68
-
LayoutModelPlugin::createLayout
Layout * createLayout()
Creates a new layout object and adds it to the list of layout objects and returns it.
Definition: LayoutModelPlugin.cpp:480
+
LayoutModelPlugin::createLayout
Layout * createLayout()
Creates a new layout object and adds it to the list of layout objects and returns it.
Definition: LayoutModelPlugin.cpp:476
LayoutPkgNamespaces
LineSegment
Definition: LineSegment.h:69
LineSegment::setEnd
void setEnd(const Point *end)
Initializes the end point with a copy of the given Point object.
Definition: LineSegment.cpp:374
@@ -448,9 +448,9 @@
Model::createCompartment
Compartment * createCompartment()
Creates a new Compartment inside this Model and returns it.
Definition: Model.cpp:1558
Point
Definition: Point.h:65
ReactionGlyph
Definition: ReactionGlyph.h:255
-
ReactionGlyph::createSpeciesReferenceGlyph
SpeciesReferenceGlyph * createSpeciesReferenceGlyph()
Creates a new SpeciesReferenceGlyph object, adds it to the end of the list of species reference objec...
Definition: ReactionGlyph.cpp:501
+
ReactionGlyph::createSpeciesReferenceGlyph
SpeciesReferenceGlyph * createSpeciesReferenceGlyph()
Creates a new SpeciesReferenceGlyph object, adds it to the end of the list of species reference objec...
Definition: ReactionGlyph.cpp:497
ReactionGlyph::setReactionId
int setReactionId(const std::string &id)
Sets the id of the associated reaction.
Definition: ReactionGlyph.cpp:324
-
ReactionGlyph::getCurve
const Curve * getCurve() const
Returns the curve object for the reaction glyph.
Definition: ReactionGlyph.cpp:452
+
ReactionGlyph::getCurve
const Curve * getCurve() const
Returns the curve object for the reaction glyph.
Definition: ReactionGlyph.cpp:448
Reaction
Definition: Reaction.h:224
Reaction::createReactant
SpeciesReference * createReactant()
Creates a new SpeciesReference, adds it to this Reaction's list of reactants, and returns it.
Definition: Reaction.cpp:954
Reaction::setReversible
int setReversible(bool value)
Sets the value of the "reversible" attribute of this Reaction.
Definition: Reaction.cpp:599
diff --git a/example2-_l3_8cpp-example.html b/example2-_l3_8cpp-example.html index 8b9167f87..f23d42995 100644 --- a/example2-_l3_8cpp-example.html +++ b/example2-_l3_8cpp-example.html @@ -1584,19 +1584,19 @@
CubicBezier::setBasePoint2
void setBasePoint2(const Point *p)
Initializes second base point with a copy of the given point.
Definition: CubicBezier.cpp:457
CubicBezier::setBasePoint1
void setBasePoint1(const Point *p)
Initializes first base point with a copy of the given point.
Definition: CubicBezier.cpp:408
Curve
Definition: Curve.h:217
-
Curve::createLineSegment
LineSegment * createLineSegment()
Creates a new LineSegment and adds it to the end of the list.
Definition: Curve.cpp:364
+
Curve::createLineSegment
LineSegment * createLineSegment()
Creates a new LineSegment and adds it to the end of the list.
Definition: Curve.cpp:360
Dimensions
Definition: Dimensions.h:71
GraphicalObject::setId
virtual int setId(const std::string &sid)
Sets the value of the "id" attribute of this GraphicalObject.
Definition: GraphicalObject.cpp:390
GraphicalObject::setBoundingBox
void setBoundingBox(const BoundingBox *bb)
Sets the boundingbox for the GraphicalObject.
Definition: GraphicalObject.cpp:475
GraphicalObject::getId
virtual const std::string & getId() const
Returns the value of the "id" attribute of this GraphicalObject.
Definition: GraphicalObject.cpp:372
Layout
Definition: Layout.h:789
Layout::setId
virtual int setId(const std::string &sid)
Sets the value of the "id" attribute of this Layout.
Definition: Layout.cpp:454
-
Layout::createReactionGlyph
ReactionGlyph * createReactionGlyph()
Creates a ReactionGlyph object, adds it to the end of the reaction glyph objects list and returns a p...
Definition: Layout.cpp:1417
+
Layout::createReactionGlyph
ReactionGlyph * createReactionGlyph()
Creates a ReactionGlyph object, adds it to the end of the reaction glyph objects list and returns a p...
Definition: Layout.cpp:1397
Layout::setDimensions
void setDimensions(const Dimensions *dimensions)
Sets the dimensions of the layout.
Definition: Layout.cpp:520
-
Layout::createTextGlyph
TextGlyph * createTextGlyph()
Creates a TextGlyph object, adds it to the end of the text glyph objects list and returns a pointer t...
Definition: Layout.cpp:1448
-
Layout::createSpeciesGlyph
SpeciesGlyph * createSpeciesGlyph()
Creates a SpeciesGlyph object, adds it to the end of the species glyph objects list and returns a poi...
Definition: Layout.cpp:1401
+
Layout::createTextGlyph
TextGlyph * createTextGlyph()
Creates a TextGlyph object, adds it to the end of the text glyph objects list and returns a pointer t...
Definition: Layout.cpp:1428
+
Layout::createSpeciesGlyph
SpeciesGlyph * createSpeciesGlyph()
Creates a SpeciesGlyph object, adds it to the end of the species glyph objects list and returns a poi...
Definition: Layout.cpp:1381
LayoutModelPlugin
Definition: LayoutModelPlugin.h:68
-
LayoutModelPlugin::createLayout
Layout * createLayout()
Creates a new layout object and adds it to the list of layout objects and returns it.
Definition: LayoutModelPlugin.cpp:480
+
LayoutModelPlugin::createLayout
Layout * createLayout()
Creates a new layout object and adds it to the list of layout objects and returns it.
Definition: LayoutModelPlugin.cpp:476
LayoutPkgNamespaces
LineSegment
Definition: LineSegment.h:69
LineSegment::setEnd
void setEnd(const Point *end)
Initializes the end point with a copy of the given Point object.
Definition: LineSegment.cpp:374
@@ -1608,9 +1608,9 @@
Model::createCompartment
Compartment * createCompartment()
Creates a new Compartment inside this Model and returns it.
Definition: Model.cpp:1558
Point
Definition: Point.h:65
ReactionGlyph
Definition: ReactionGlyph.h:255
-
ReactionGlyph::createSpeciesReferenceGlyph
SpeciesReferenceGlyph * createSpeciesReferenceGlyph()
Creates a new SpeciesReferenceGlyph object, adds it to the end of the list of species reference objec...
Definition: ReactionGlyph.cpp:501
+
ReactionGlyph::createSpeciesReferenceGlyph
SpeciesReferenceGlyph * createSpeciesReferenceGlyph()
Creates a new SpeciesReferenceGlyph object, adds it to the end of the list of species reference objec...
Definition: ReactionGlyph.cpp:497
ReactionGlyph::setReactionId
int setReactionId(const std::string &id)
Sets the id of the associated reaction.
Definition: ReactionGlyph.cpp:324
-
ReactionGlyph::getCurve
const Curve * getCurve() const
Returns the curve object for the reaction glyph.
Definition: ReactionGlyph.cpp:452
+
ReactionGlyph::getCurve
const Curve * getCurve() const
Returns the curve object for the reaction glyph.
Definition: ReactionGlyph.cpp:448
Reaction
Definition: Reaction.h:224
Reaction::createReactant
SpeciesReference * createReactant()
Creates a new SpeciesReference, adds it to this Reaction's list of reactants, and returns it.
Definition: Reaction.cpp:954
Reaction::setReversible
int setReversible(bool value)
Sets the value of the "reversible" attribute of this Reaction.
Definition: Reaction.cpp:599
diff --git a/example2_8cpp-example.html b/example2_8cpp-example.html index c4f74c3b1..be9496e7c 100644 --- a/example2_8cpp-example.html +++ b/example2_8cpp-example.html @@ -1499,7 +1499,7 @@
CubicBezier::setBasePoint2
void setBasePoint2(const Point *p)
Initializes second base point with a copy of the given point.
Definition: CubicBezier.cpp:457
CubicBezier::setBasePoint1
void setBasePoint1(const Point *p)
Initializes first base point with a copy of the given point.
Definition: CubicBezier.cpp:408
Curve
Definition: Curve.h:217
-
Curve::createLineSegment
LineSegment * createLineSegment()
Creates a new LineSegment and adds it to the end of the list.
Definition: Curve.cpp:364
+
Curve::createLineSegment
LineSegment * createLineSegment()
Creates a new LineSegment and adds it to the end of the list.
Definition: Curve.cpp:360
Dimensions
Definition: Dimensions.h:71
GraphicalObject::setId
virtual int setId(const std::string &sid)
Sets the value of the "id" attribute of this GraphicalObject.
Definition: GraphicalObject.cpp:390
GraphicalObject::setBoundingBox
void setBoundingBox(const BoundingBox *bb)
Sets the boundingbox for the GraphicalObject.
Definition: GraphicalObject.cpp:475
@@ -1507,12 +1507,12 @@
LayoutExtension::getXmlnsL2
static const std::string & getXmlnsL2()
Returns the XML namespace URI of the SBML Level 2 version of the package implemented by this libSBML ...
Definition: LayoutExtension.cpp:109
Layout
Definition: Layout.h:789
Layout::setId
virtual int setId(const std::string &sid)
Sets the value of the "id" attribute of this Layout.
Definition: Layout.cpp:454
-
Layout::createReactionGlyph
ReactionGlyph * createReactionGlyph()
Creates a ReactionGlyph object, adds it to the end of the reaction glyph objects list and returns a p...
Definition: Layout.cpp:1417
+
Layout::createReactionGlyph
ReactionGlyph * createReactionGlyph()
Creates a ReactionGlyph object, adds it to the end of the reaction glyph objects list and returns a p...
Definition: Layout.cpp:1397
Layout::setDimensions
void setDimensions(const Dimensions *dimensions)
Sets the dimensions of the layout.
Definition: Layout.cpp:520
-
Layout::createTextGlyph
TextGlyph * createTextGlyph()
Creates a TextGlyph object, adds it to the end of the text glyph objects list and returns a pointer t...
Definition: Layout.cpp:1448
-
Layout::createSpeciesGlyph
SpeciesGlyph * createSpeciesGlyph()
Creates a SpeciesGlyph object, adds it to the end of the species glyph objects list and returns a poi...
Definition: Layout.cpp:1401
+
Layout::createTextGlyph
TextGlyph * createTextGlyph()
Creates a TextGlyph object, adds it to the end of the text glyph objects list and returns a pointer t...
Definition: Layout.cpp:1428
+
Layout::createSpeciesGlyph
SpeciesGlyph * createSpeciesGlyph()
Creates a SpeciesGlyph object, adds it to the end of the species glyph objects list and returns a poi...
Definition: Layout.cpp:1381
LayoutModelPlugin
Definition: LayoutModelPlugin.h:68
-
LayoutModelPlugin::createLayout
Layout * createLayout()
Creates a new layout object and adds it to the list of layout objects and returns it.
Definition: LayoutModelPlugin.cpp:480
+
LayoutModelPlugin::createLayout
Layout * createLayout()
Creates a new layout object and adds it to the list of layout objects and returns it.
Definition: LayoutModelPlugin.cpp:476
LayoutPkgNamespaces
LineSegment
Definition: LineSegment.h:69
LineSegment::setEnd
void setEnd(const Point *end)
Initializes the end point with a copy of the given Point object.
Definition: LineSegment.cpp:374
@@ -1524,9 +1524,9 @@
Model::createCompartment
Compartment * createCompartment()
Creates a new Compartment inside this Model and returns it.
Definition: Model.cpp:1558
Point
Definition: Point.h:65
ReactionGlyph
Definition: ReactionGlyph.h:255
-
ReactionGlyph::createSpeciesReferenceGlyph
SpeciesReferenceGlyph * createSpeciesReferenceGlyph()
Creates a new SpeciesReferenceGlyph object, adds it to the end of the list of species reference objec...
Definition: ReactionGlyph.cpp:501
+
ReactionGlyph::createSpeciesReferenceGlyph
SpeciesReferenceGlyph * createSpeciesReferenceGlyph()
Creates a new SpeciesReferenceGlyph object, adds it to the end of the list of species reference objec...
Definition: ReactionGlyph.cpp:497
ReactionGlyph::setReactionId
int setReactionId(const std::string &id)
Sets the id of the associated reaction.
Definition: ReactionGlyph.cpp:324
-
ReactionGlyph::getCurve
const Curve * getCurve() const
Returns the curve object for the reaction glyph.
Definition: ReactionGlyph.cpp:452
+
ReactionGlyph::getCurve
const Curve * getCurve() const
Returns the curve object for the reaction glyph.
Definition: ReactionGlyph.cpp:448
Reaction
Definition: Reaction.h:224
Reaction::createReactant
SpeciesReference * createReactant()
Creates a new SpeciesReference, adds it to this Reaction's list of reactants, and returns it.
Definition: Reaction.cpp:954
Reaction::setReversible
int setReversible(bool value)
Sets the value of the "reversible" attribute of this Reaction.
Definition: Reaction.cpp:599
diff --git a/example3-_l3_8cpp-example.html b/example3-_l3_8cpp-example.html index 34986aa66..7e4c4489e 100644 --- a/example3-_l3_8cpp-example.html +++ b/example3-_l3_8cpp-example.html @@ -506,20 +506,20 @@
CubicBezier::setBasePoint2
void setBasePoint2(const Point *p)
Initializes second base point with a copy of the given point.
Definition: CubicBezier.cpp:457
CubicBezier::setBasePoint1
void setBasePoint1(const Point *p)
Initializes first base point with a copy of the given point.
Definition: CubicBezier.cpp:408
Curve
Definition: Curve.h:217
-
Curve::createLineSegment
LineSegment * createLineSegment()
Creates a new LineSegment and adds it to the end of the list.
Definition: Curve.cpp:364
+
Curve::createLineSegment
LineSegment * createLineSegment()
Creates a new LineSegment and adds it to the end of the list.
Definition: Curve.cpp:360
Dimensions
Definition: Dimensions.h:71
GraphicalObject::setId
virtual int setId(const std::string &sid)
Sets the value of the "id" attribute of this GraphicalObject.
Definition: GraphicalObject.cpp:390
GraphicalObject::setBoundingBox
void setBoundingBox(const BoundingBox *bb)
Sets the boundingbox for the GraphicalObject.
Definition: GraphicalObject.cpp:475
GraphicalObject::getId
virtual const std::string & getId() const
Returns the value of the "id" attribute of this GraphicalObject.
Definition: GraphicalObject.cpp:372
Layout
Definition: Layout.h:789
Layout::setId
virtual int setId(const std::string &sid)
Sets the value of the "id" attribute of this Layout.
Definition: Layout.cpp:454
-
Layout::createCompartmentGlyph
CompartmentGlyph * createCompartmentGlyph()
Creates a CompartmentGlyph object, adds it to the end of the compartment glyph objects list and retur...
Definition: Layout.cpp:1385
-
Layout::createReactionGlyph
ReactionGlyph * createReactionGlyph()
Creates a ReactionGlyph object, adds it to the end of the reaction glyph objects list and returns a p...
Definition: Layout.cpp:1417
+
Layout::createCompartmentGlyph
CompartmentGlyph * createCompartmentGlyph()
Creates a CompartmentGlyph object, adds it to the end of the compartment glyph objects list and retur...
Definition: Layout.cpp:1365
+
Layout::createReactionGlyph
ReactionGlyph * createReactionGlyph()
Creates a ReactionGlyph object, adds it to the end of the reaction glyph objects list and returns a p...
Definition: Layout.cpp:1397
Layout::setDimensions
void setDimensions(const Dimensions *dimensions)
Sets the dimensions of the layout.
Definition: Layout.cpp:520
-
Layout::createTextGlyph
TextGlyph * createTextGlyph()
Creates a TextGlyph object, adds it to the end of the text glyph objects list and returns a pointer t...
Definition: Layout.cpp:1448
-
Layout::createSpeciesGlyph
SpeciesGlyph * createSpeciesGlyph()
Creates a SpeciesGlyph object, adds it to the end of the species glyph objects list and returns a poi...
Definition: Layout.cpp:1401
+
Layout::createTextGlyph
TextGlyph * createTextGlyph()
Creates a TextGlyph object, adds it to the end of the text glyph objects list and returns a pointer t...
Definition: Layout.cpp:1428
+
Layout::createSpeciesGlyph
SpeciesGlyph * createSpeciesGlyph()
Creates a SpeciesGlyph object, adds it to the end of the species glyph objects list and returns a poi...
Definition: Layout.cpp:1381
LayoutModelPlugin
Definition: LayoutModelPlugin.h:68
-
LayoutModelPlugin::createLayout
Layout * createLayout()
Creates a new layout object and adds it to the list of layout objects and returns it.
Definition: LayoutModelPlugin.cpp:480
+
LayoutModelPlugin::createLayout
Layout * createLayout()
Creates a new layout object and adds it to the list of layout objects and returns it.
Definition: LayoutModelPlugin.cpp:476
LayoutPkgNamespaces
LineSegment
Definition: LineSegment.h:69
LineSegment::setEnd
void setEnd(const Point *end)
Initializes the end point with a copy of the given Point object.
Definition: LineSegment.cpp:374
@@ -532,9 +532,9 @@
ModifierSpeciesReference
Definition: ModifierSpeciesReference.h:92
Point
Definition: Point.h:65
ReactionGlyph
Definition: ReactionGlyph.h:255
-
ReactionGlyph::createSpeciesReferenceGlyph
SpeciesReferenceGlyph * createSpeciesReferenceGlyph()
Creates a new SpeciesReferenceGlyph object, adds it to the end of the list of species reference objec...
Definition: ReactionGlyph.cpp:501
+
ReactionGlyph::createSpeciesReferenceGlyph
SpeciesReferenceGlyph * createSpeciesReferenceGlyph()
Creates a new SpeciesReferenceGlyph object, adds it to the end of the list of species reference objec...
Definition: ReactionGlyph.cpp:497
ReactionGlyph::setReactionId
int setReactionId(const std::string &id)
Sets the id of the associated reaction.
Definition: ReactionGlyph.cpp:324
-
ReactionGlyph::getCurve
const Curve * getCurve() const
Returns the curve object for the reaction glyph.
Definition: ReactionGlyph.cpp:452
+
ReactionGlyph::getCurve
const Curve * getCurve() const
Returns the curve object for the reaction glyph.
Definition: ReactionGlyph.cpp:448
Reaction
Definition: Reaction.h:224
Reaction::createReactant
SpeciesReference * createReactant()
Creates a new SpeciesReference, adds it to this Reaction's list of reactants, and returns it.
Definition: Reaction.cpp:954
Reaction::setReversible
int setReversible(bool value)
Sets the value of the "reversible" attribute of this Reaction.
Definition: Reaction.cpp:599
diff --git a/example3_8cpp-example.html b/example3_8cpp-example.html index 45748c45d..4d7432bc4 100644 --- a/example3_8cpp-example.html +++ b/example3_8cpp-example.html @@ -488,7 +488,7 @@
CubicBezier::setBasePoint2
void setBasePoint2(const Point *p)
Initializes second base point with a copy of the given point.
Definition: CubicBezier.cpp:457
CubicBezier::setBasePoint1
void setBasePoint1(const Point *p)
Initializes first base point with a copy of the given point.
Definition: CubicBezier.cpp:408
Curve
Definition: Curve.h:217
-
Curve::createLineSegment
LineSegment * createLineSegment()
Creates a new LineSegment and adds it to the end of the list.
Definition: Curve.cpp:364
+
Curve::createLineSegment
LineSegment * createLineSegment()
Creates a new LineSegment and adds it to the end of the list.
Definition: Curve.cpp:360
Dimensions
Definition: Dimensions.h:71
GraphicalObject::setId
virtual int setId(const std::string &sid)
Sets the value of the "id" attribute of this GraphicalObject.
Definition: GraphicalObject.cpp:390
GraphicalObject::setBoundingBox
void setBoundingBox(const BoundingBox *bb)
Sets the boundingbox for the GraphicalObject.
Definition: GraphicalObject.cpp:475
@@ -496,13 +496,13 @@
LayoutExtension::getXmlnsL2
static const std::string & getXmlnsL2()
Returns the XML namespace URI of the SBML Level 2 version of the package implemented by this libSBML ...
Definition: LayoutExtension.cpp:109
Layout
Definition: Layout.h:789
Layout::setId
virtual int setId(const std::string &sid)
Sets the value of the "id" attribute of this Layout.
Definition: Layout.cpp:454
-
Layout::createCompartmentGlyph
CompartmentGlyph * createCompartmentGlyph()
Creates a CompartmentGlyph object, adds it to the end of the compartment glyph objects list and retur...
Definition: Layout.cpp:1385
-
Layout::createReactionGlyph
ReactionGlyph * createReactionGlyph()
Creates a ReactionGlyph object, adds it to the end of the reaction glyph objects list and returns a p...
Definition: Layout.cpp:1417
+
Layout::createCompartmentGlyph
CompartmentGlyph * createCompartmentGlyph()
Creates a CompartmentGlyph object, adds it to the end of the compartment glyph objects list and retur...
Definition: Layout.cpp:1365
+
Layout::createReactionGlyph
ReactionGlyph * createReactionGlyph()
Creates a ReactionGlyph object, adds it to the end of the reaction glyph objects list and returns a p...
Definition: Layout.cpp:1397
Layout::setDimensions
void setDimensions(const Dimensions *dimensions)
Sets the dimensions of the layout.
Definition: Layout.cpp:520
-
Layout::createTextGlyph
TextGlyph * createTextGlyph()
Creates a TextGlyph object, adds it to the end of the text glyph objects list and returns a pointer t...
Definition: Layout.cpp:1448
-
Layout::createSpeciesGlyph
SpeciesGlyph * createSpeciesGlyph()
Creates a SpeciesGlyph object, adds it to the end of the species glyph objects list and returns a poi...
Definition: Layout.cpp:1401
+
Layout::createTextGlyph
TextGlyph * createTextGlyph()
Creates a TextGlyph object, adds it to the end of the text glyph objects list and returns a pointer t...
Definition: Layout.cpp:1428
+
Layout::createSpeciesGlyph
SpeciesGlyph * createSpeciesGlyph()
Creates a SpeciesGlyph object, adds it to the end of the species glyph objects list and returns a poi...
Definition: Layout.cpp:1381
LayoutModelPlugin
Definition: LayoutModelPlugin.h:68
-
LayoutModelPlugin::createLayout
Layout * createLayout()
Creates a new layout object and adds it to the list of layout objects and returns it.
Definition: LayoutModelPlugin.cpp:480
+
LayoutModelPlugin::createLayout
Layout * createLayout()
Creates a new layout object and adds it to the list of layout objects and returns it.
Definition: LayoutModelPlugin.cpp:476
LayoutPkgNamespaces
LineSegment
Definition: LineSegment.h:69
LineSegment::setEnd
void setEnd(const Point *end)
Initializes the end point with a copy of the given Point object.
Definition: LineSegment.cpp:374
@@ -515,9 +515,9 @@
ModifierSpeciesReference
Definition: ModifierSpeciesReference.h:92
Point
Definition: Point.h:65
ReactionGlyph
Definition: ReactionGlyph.h:255
-
ReactionGlyph::createSpeciesReferenceGlyph
SpeciesReferenceGlyph * createSpeciesReferenceGlyph()
Creates a new SpeciesReferenceGlyph object, adds it to the end of the list of species reference objec...
Definition: ReactionGlyph.cpp:501
+
ReactionGlyph::createSpeciesReferenceGlyph
SpeciesReferenceGlyph * createSpeciesReferenceGlyph()
Creates a new SpeciesReferenceGlyph object, adds it to the end of the list of species reference objec...
Definition: ReactionGlyph.cpp:497
ReactionGlyph::setReactionId
int setReactionId(const std::string &id)
Sets the id of the associated reaction.
Definition: ReactionGlyph.cpp:324
-
ReactionGlyph::getCurve
const Curve * getCurve() const
Returns the curve object for the reaction glyph.
Definition: ReactionGlyph.cpp:452
+
ReactionGlyph::getCurve
const Curve * getCurve() const
Returns the curve object for the reaction glyph.
Definition: ReactionGlyph.cpp:448
Reaction
Definition: Reaction.h:224
Reaction::createReactant
SpeciesReference * createReactant()
Creates a new SpeciesReference, adds it to this Reaction's list of reactants, and returns it.
Definition: Reaction.cpp:954
Reaction::setReversible
int setReversible(bool value)
Sets the value of the "reversible" attribute of this Reaction.
Definition: Reaction.cpp:599
diff --git a/fbc_example1_8cpp-example.html b/fbc_example1_8cpp-example.html index 4ba342366..70cd58d25 100644 --- a/fbc_example1_8cpp-example.html +++ b/fbc_example1_8cpp-example.html @@ -414,9 +414,9 @@
Compartment::setId
virtual int setId(const std::string &sid)
Sets the value of the "id" attribute of this Compartment object.
Definition: Compartment.cpp:479
Compartment::setSize
int setSize(double value)
Sets the "size" attribute (or "volume" in SBML Level 1) of this Compartment object.
Definition: Compartment.cpp:603
FbcModelPlugin
Definition: FbcModelPlugin.h:165
-
FbcModelPlugin::createObjective
Objective * createObjective()
Creates a new Objective object, adds it to this FbcModelPlugin's ListOfObjectives and returns the Obj...
Definition: FbcModelPlugin.cpp:946
-
FbcModelPlugin::createFluxBound
FluxBound * createFluxBound()
Creates a new FluxBound object and adds it to the list of FluxBound objects and returns it.
Definition: FbcModelPlugin.cpp:681
-
FbcModelPlugin::setActiveObjectiveId
int setActiveObjectiveId(const std::string &objectiveId)
Sets the id of the active objective.
Definition: FbcModelPlugin.cpp:1177
+
FbcModelPlugin::createObjective
Objective * createObjective()
Creates a new Objective object, adds it to this FbcModelPlugin's ListOfObjectives and returns the Obj...
Definition: FbcModelPlugin.cpp:938
+
FbcModelPlugin::createFluxBound
FluxBound * createFluxBound()
Creates a new FluxBound object and adds it to the list of FluxBound objects and returns it.
Definition: FbcModelPlugin.cpp:677
+
FbcModelPlugin::setActiveObjectiveId
int setActiveObjectiveId(const std::string &objectiveId)
Sets the id of the active objective.
Definition: FbcModelPlugin.cpp:1165
FluxBound
Definition: FluxBound.h:137
FluxBound::setId
virtual int setId(const std::string &sid)
Sets the value of the "id" attribute of this FluxBound.
Definition: FluxBound.cpp:173
FluxBound::setReaction
virtual int setReaction(const std::string &reaction)
Sets the value of the "reaction" attribute of this FluxBound object.
Definition: FluxBound.cpp:252
@@ -432,7 +432,7 @@
Objective
Definition: Objective.h:148
Objective::setId
virtual int setId(const std::string &sid)
Sets the value of the "id" attribute of this Objective.
Definition: Objective.cpp:234
Objective::setType
int setType(ObjectiveType_t type)
Sets the value of the "type" attribute of this Objective.
Definition: Objective.cpp:257
-
Objective::createFluxObjective
FluxObjective * createFluxObjective()
Creates a new FluxObjective object.
Definition: Objective.cpp:471
+
Objective::createFluxObjective
FluxObjective * createFluxObjective()
Creates a new FluxObjective object.
Definition: Objective.cpp:467
Reaction
Definition: Reaction.h:224
Reaction::createReactant
SpeciesReference * createReactant()
Creates a new SpeciesReference, adds it to this Reaction's list of reactants, and returns it.
Definition: Reaction.cpp:954
Reaction::setReversible
int setReversible(bool value)
Sets the value of the "reversible" attribute of this Reaction.
Definition: Reaction.cpp:599
diff --git a/groups_example1_8cpp-example.html b/groups_example1_8cpp-example.html index ea581f015..4aa52e6cf 100644 --- a/groups_example1_8cpp-example.html +++ b/groups_example1_8cpp-example.html @@ -225,11 +225,11 @@
Compartment::setConstant
int setConstant(bool value)
Sets the value of the "constant" attribute of this Compartment object.
Definition: Compartment.cpp:661
Compartment::setId
virtual int setId(const std::string &sid)
Sets the value of the "id" attribute of this Compartment object.
Definition: Compartment.cpp:479
Group
Definition: Group.h:177
-
Group::createMember
Member * createMember()
Creates a new Member object, adds it to this Group object and returns the Member object created.
Definition: Group.cpp:448
+
Group::createMember
Member * createMember()
Creates a new Member object, adds it to this Group object and returns the Member object created.
Definition: Group.cpp:444
Group::setKind
int setKind(const GroupKind_t kind)
Sets the value of the "kind" attribute of this Group.
Definition: Group.cpp:234
Group::setId
virtual int setId(const std::string &id)
Sets the value of the "id" attribute of this Group.
Definition: Group.cpp:213
GroupsModelPlugin
Definition: GroupsModelPlugin.h:66
-
GroupsModelPlugin::createGroup
Group * createGroup()
Creates a new Group object, adds it to this GroupsModelPlugin object and returns the Group object cre...
Definition: GroupsModelPlugin.cpp:232
+
GroupsModelPlugin::createGroup
Group * createGroup()
Creates a new Group object, adds it to this GroupsModelPlugin object and returns the Group object cre...
Definition: GroupsModelPlugin.cpp:228
Member
Definition: Member.h:85
Member::setIdRef
int setIdRef(const std::string &idRef)
Sets the value of the "idRef" attribute of this Member.
Definition: Member.cpp:239
Model
Definition: Model.h:485
diff --git a/groups_example2_8cpp-example.html b/groups_example2_8cpp-example.html index 0b258d7b9..e18d239f6 100644 --- a/groups_example2_8cpp-example.html +++ b/groups_example2_8cpp-example.html @@ -436,27 +436,27 @@
CubicBezier::setBasePoint2
void setBasePoint2(const Point *p)
Initializes second base point with a copy of the given point.
Definition: CubicBezier.cpp:457
CubicBezier::setBasePoint1
void setBasePoint1(const Point *p)
Initializes first base point with a copy of the given point.
Definition: CubicBezier.cpp:408
Curve
Definition: Curve.h:217
-
Curve::createLineSegment
LineSegment * createLineSegment()
Creates a new LineSegment and adds it to the end of the list.
Definition: Curve.cpp:364
-
Curve::createCubicBezier
CubicBezier * createCubicBezier()
Creates a new CubicBezier and adds it to the end of the list.
Definition: Curve.cpp:379
+
Curve::createLineSegment
LineSegment * createLineSegment()
Creates a new LineSegment and adds it to the end of the list.
Definition: Curve.cpp:360
+
Curve::createCubicBezier
CubicBezier * createCubicBezier()
Creates a new CubicBezier and adds it to the end of the list.
Definition: Curve.cpp:375
Dimensions
Definition: Dimensions.h:71
GraphicalObject::setId
virtual int setId(const std::string &sid)
Sets the value of the "id" attribute of this GraphicalObject.
Definition: GraphicalObject.cpp:390
GraphicalObject::setBoundingBox
void setBoundingBox(const BoundingBox *bb)
Sets the boundingbox for the GraphicalObject.
Definition: GraphicalObject.cpp:475
GraphicalObject::getId
virtual const std::string & getId() const
Returns the value of the "id" attribute of this GraphicalObject.
Definition: GraphicalObject.cpp:372
Group
Definition: Group.h:177
-
Group::createMember
Member * createMember()
Creates a new Member object, adds it to this Group object and returns the Member object created.
Definition: Group.cpp:448
+
Group::createMember
Member * createMember()
Creates a new Member object, adds it to this Group object and returns the Member object created.
Definition: Group.cpp:444
Group::setKind
int setKind(const GroupKind_t kind)
Sets the value of the "kind" attribute of this Group.
Definition: Group.cpp:234
Group::setId
virtual int setId(const std::string &id)
Sets the value of the "id" attribute of this Group.
Definition: Group.cpp:213
GroupsModelPlugin
Definition: GroupsModelPlugin.h:66
-
GroupsModelPlugin::createGroup
Group * createGroup()
Creates a new Group object, adds it to this GroupsModelPlugin object and returns the Group object cre...
Definition: GroupsModelPlugin.cpp:232
+
GroupsModelPlugin::createGroup
Group * createGroup()
Creates a new Group object, adds it to this GroupsModelPlugin object and returns the Group object cre...
Definition: GroupsModelPlugin.cpp:228
Layout
Definition: Layout.h:789
Layout::setId
virtual int setId(const std::string &sid)
Sets the value of the "id" attribute of this Layout.
Definition: Layout.cpp:454
-
Layout::createCompartmentGlyph
CompartmentGlyph * createCompartmentGlyph()
Creates a CompartmentGlyph object, adds it to the end of the compartment glyph objects list and retur...
Definition: Layout.cpp:1385
-
Layout::createReactionGlyph
ReactionGlyph * createReactionGlyph()
Creates a ReactionGlyph object, adds it to the end of the reaction glyph objects list and returns a p...
Definition: Layout.cpp:1417
+
Layout::createCompartmentGlyph
CompartmentGlyph * createCompartmentGlyph()
Creates a CompartmentGlyph object, adds it to the end of the compartment glyph objects list and retur...
Definition: Layout.cpp:1365
+
Layout::createReactionGlyph
ReactionGlyph * createReactionGlyph()
Creates a ReactionGlyph object, adds it to the end of the reaction glyph objects list and returns a p...
Definition: Layout.cpp:1397
Layout::setDimensions
void setDimensions(const Dimensions *dimensions)
Sets the dimensions of the layout.
Definition: Layout.cpp:520
-
Layout::createTextGlyph
TextGlyph * createTextGlyph()
Creates a TextGlyph object, adds it to the end of the text glyph objects list and returns a pointer t...
Definition: Layout.cpp:1448
-
Layout::createSpeciesGlyph
SpeciesGlyph * createSpeciesGlyph()
Creates a SpeciesGlyph object, adds it to the end of the species glyph objects list and returns a poi...
Definition: Layout.cpp:1401
+
Layout::createTextGlyph
TextGlyph * createTextGlyph()
Creates a TextGlyph object, adds it to the end of the text glyph objects list and returns a pointer t...
Definition: Layout.cpp:1428
+
Layout::createSpeciesGlyph
SpeciesGlyph * createSpeciesGlyph()
Creates a SpeciesGlyph object, adds it to the end of the species glyph objects list and returns a poi...
Definition: Layout.cpp:1381
LayoutModelPlugin
Definition: LayoutModelPlugin.h:68
-
LayoutModelPlugin::createLayout
Layout * createLayout()
Creates a new layout object and adds it to the list of layout objects and returns it.
Definition: LayoutModelPlugin.cpp:480
+
LayoutModelPlugin::createLayout
Layout * createLayout()
Creates a new layout object and adds it to the list of layout objects and returns it.
Definition: LayoutModelPlugin.cpp:476
LayoutPkgNamespaces
LineSegment
Definition: LineSegment.h:69
LineSegment::setEnd
void setEnd(const Point *end)
Initializes the end point with a copy of the given Point object.
Definition: LineSegment.cpp:374
@@ -470,9 +470,9 @@
Model::createCompartment
Compartment * createCompartment()
Creates a new Compartment inside this Model and returns it.
Definition: Model.cpp:1558
Point
Definition: Point.h:65
ReactionGlyph
Definition: ReactionGlyph.h:255
-
ReactionGlyph::createSpeciesReferenceGlyph
SpeciesReferenceGlyph * createSpeciesReferenceGlyph()
Creates a new SpeciesReferenceGlyph object, adds it to the end of the list of species reference objec...
Definition: ReactionGlyph.cpp:501
+
ReactionGlyph::createSpeciesReferenceGlyph
SpeciesReferenceGlyph * createSpeciesReferenceGlyph()
Creates a new SpeciesReferenceGlyph object, adds it to the end of the list of species reference objec...
Definition: ReactionGlyph.cpp:497
ReactionGlyph::setReactionId
int setReactionId(const std::string &id)
Sets the id of the associated reaction.
Definition: ReactionGlyph.cpp:324
-
ReactionGlyph::getCurve
const Curve * getCurve() const
Returns the curve object for the reaction glyph.
Definition: ReactionGlyph.cpp:452
+
ReactionGlyph::getCurve
const Curve * getCurve() const
Returns the curve object for the reaction glyph.
Definition: ReactionGlyph.cpp:448
Reaction
Definition: Reaction.h:224
Reaction::createReactant
SpeciesReference * createReactant()
Creates a new SpeciesReference, adds it to this Reaction's list of reactants, and returns it.
Definition: Reaction.cpp:954
Reaction::setReversible
int setReversible(bool value)
Sets the value of the "reversible" attribute of this Reaction.
Definition: Reaction.cpp:599
diff --git a/libsbml-package-stylesheet.css b/libsbml-package-stylesheet.css index df3eaab8e..0ec2626ba 100644 --- a/libsbml-package-stylesheet.css +++ b/libsbml-package-stylesheet.css @@ -148,8 +148,38 @@ p a.el[href="group__render.html"] /* Styling for package 'comp' used in libSBML Javadoc output */ -.FrameItemFont a[href$="SBMLFileResolver.html"], -.indexContainer a[href$="SBMLFileResolver.html"], +.FrameItemFont a[href$="ReplacedBy.html"], +.indexContainer a[href$="ReplacedBy.html"], +.FrameItemFont a[href$="Deletion.html"], +.indexContainer a[href$="Deletion.html"], +.FrameItemFont a[href$="Submodel.html"], +.indexContainer a[href$="Submodel.html"], +.FrameItemFont a[href$="ListOfExternalModelDefinitions.html"], +.indexContainer a[href$="ListOfExternalModelDefinitions.html"], +.FrameItemFont a[href$="Port.html"], +.indexContainer a[href$="Port.html"], +.FrameItemFont a[href$="ExternalModelDefinition.html"], +.indexContainer a[href$="ExternalModelDefinition.html"], +.FrameItemFont a[href$="ListOfDeletions.html"], +.indexContainer a[href$="ListOfDeletions.html"], +.FrameItemFont a[href$="SBaseRef.html"], +.indexContainer a[href$="SBaseRef.html"], +.FrameItemFont a[href$="ListOfSubmodels.html"], +.indexContainer a[href$="ListOfSubmodels.html"], +.FrameItemFont a[href$="ModelDefinition.html"], +.indexContainer a[href$="ModelDefinition.html"], +.FrameItemFont a[href$="ReplacedElement.html"], +.indexContainer a[href$="ReplacedElement.html"], +.FrameItemFont a[href$="ListOfPorts.html"], +.indexContainer a[href$="ListOfPorts.html"], +.FrameItemFont a[href$="CompBase.html"], +.indexContainer a[href$="CompBase.html"], +.FrameItemFont a[href$="ListOfReplacedElements.html"], +.indexContainer a[href$="ListOfReplacedElements.html"], +.FrameItemFont a[href$="Replacing.html"], +.indexContainer a[href$="Replacing.html"], +.FrameItemFont a[href$="ListOfModelDefinitions.html"], +.indexContainer a[href$="ListOfModelDefinitions.html"], .FrameItemFont a[href$="CompFlatteningConverter.html"], .indexContainer a[href$="CompFlatteningConverter.html"], .FrameItemFont a[href$="SBMLResolver.html"], @@ -158,57 +188,57 @@ p a.el[href="group__render.html"] .indexContainer a[href$="SBMLResolverRegistry.html"], .FrameItemFont a[href$="SBMLUri.html"], .indexContainer a[href$="SBMLUri.html"], +.FrameItemFont a[href$="SBMLFileResolver.html"], +.indexContainer a[href$="SBMLFileResolver.html"], +.FrameItemFont a[href$="CompValidator.html"], +.indexContainer a[href$="CompValidator.html"], .FrameItemFont a[href$="CompExtension.html"], .indexContainer a[href$="CompExtension.html"], .FrameItemFont a[href$="CompPkgNamespaces.html"], .indexContainer a[href$="CompPkgNamespaces.html"], -.FrameItemFont a[href$="CompSBMLDocumentPlugin.html"], -.indexContainer a[href$="CompSBMLDocumentPlugin.html"], -.FrameItemFont a[href$="CompModelPlugin.html"], -.indexContainer a[href$="CompModelPlugin.html"], .FrameItemFont a[href$="CompSBasePlugin.html"], .indexContainer a[href$="CompSBasePlugin.html"], -.FrameItemFont a[href$="ListOfExternalModelDefinitions.html"], -.indexContainer a[href$="ListOfExternalModelDefinitions.html"], -.FrameItemFont a[href$="ExternalModelDefinition.html"], -.indexContainer a[href$="ExternalModelDefinition.html"], -.FrameItemFont a[href$="SBaseRef.html"], -.indexContainer a[href$="SBaseRef.html"], -.FrameItemFont a[href$="ListOfDeletions.html"], -.indexContainer a[href$="ListOfDeletions.html"], -.FrameItemFont a[href$="Replacing.html"], -.indexContainer a[href$="Replacing.html"], -.FrameItemFont a[href$="CompBase.html"], -.indexContainer a[href$="CompBase.html"], -.FrameItemFont a[href$="Deletion.html"], -.indexContainer a[href$="Deletion.html"], -.FrameItemFont a[href$="ListOfPorts.html"], -.indexContainer a[href$="ListOfPorts.html"], -.FrameItemFont a[href$="ListOfModelDefinitions.html"], -.indexContainer a[href$="ListOfModelDefinitions.html"], -.FrameItemFont a[href$="ListOfSubmodels.html"], -.indexContainer a[href$="ListOfSubmodels.html"], -.FrameItemFont a[href$="ListOfReplacedElements.html"], -.indexContainer a[href$="ListOfReplacedElements.html"], -.FrameItemFont a[href$="ReplacedBy.html"], -.indexContainer a[href$="ReplacedBy.html"], -.FrameItemFont a[href$="ReplacedElement.html"], -.indexContainer a[href$="ReplacedElement.html"], -.FrameItemFont a[href$="Submodel.html"], -.indexContainer a[href$="Submodel.html"], -.FrameItemFont a[href$="ModelDefinition.html"], -.indexContainer a[href$="ModelDefinition.html"], -.FrameItemFont a[href$="Port.html"], -.indexContainer a[href$="Port.html"], -.FrameItemFont a[href$="CompValidator.html"], -.indexContainer a[href$="CompValidator.html"] +.FrameItemFont a[href$="CompModelPlugin.html"], +.indexContainer a[href$="CompModelPlugin.html"], +.FrameItemFont a[href$="CompSBMLDocumentPlugin.html"], +.indexContainer a[href$="CompSBMLDocumentPlugin.html"] { display: inline-block; margin-left: 0px; } -.FrameItemFont a[href$="SBMLFileResolver.html"]:before, -.indexContainer a[href$="SBMLFileResolver.html"]:before, +.FrameItemFont a[href$="ReplacedBy.html"]:before, +.indexContainer a[href$="ReplacedBy.html"]:before, +.FrameItemFont a[href$="Deletion.html"]:before, +.indexContainer a[href$="Deletion.html"]:before, +.FrameItemFont a[href$="Submodel.html"]:before, +.indexContainer a[href$="Submodel.html"]:before, +.FrameItemFont a[href$="ListOfExternalModelDefinitions.html"]:before, +.indexContainer a[href$="ListOfExternalModelDefinitions.html"]:before, +.FrameItemFont a[href$="Port.html"]:before, +.indexContainer a[href$="Port.html"]:before, +.FrameItemFont a[href$="ExternalModelDefinition.html"]:before, +.indexContainer a[href$="ExternalModelDefinition.html"]:before, +.FrameItemFont a[href$="ListOfDeletions.html"]:before, +.indexContainer a[href$="ListOfDeletions.html"]:before, +.FrameItemFont a[href$="SBaseRef.html"]:before, +.indexContainer a[href$="SBaseRef.html"]:before, +.FrameItemFont a[href$="ListOfSubmodels.html"]:before, +.indexContainer a[href$="ListOfSubmodels.html"]:before, +.FrameItemFont a[href$="ModelDefinition.html"]:before, +.indexContainer a[href$="ModelDefinition.html"]:before, +.FrameItemFont a[href$="ReplacedElement.html"]:before, +.indexContainer a[href$="ReplacedElement.html"]:before, +.FrameItemFont a[href$="ListOfPorts.html"]:before, +.indexContainer a[href$="ListOfPorts.html"]:before, +.FrameItemFont a[href$="CompBase.html"]:before, +.indexContainer a[href$="CompBase.html"]:before, +.FrameItemFont a[href$="ListOfReplacedElements.html"]:before, +.indexContainer a[href$="ListOfReplacedElements.html"]:before, +.FrameItemFont a[href$="Replacing.html"]:before, +.indexContainer a[href$="Replacing.html"]:before, +.FrameItemFont a[href$="ListOfModelDefinitions.html"]:before, +.indexContainer a[href$="ListOfModelDefinitions.html"]:before, .FrameItemFont a[href$="CompFlatteningConverter.html"]:before, .indexContainer a[href$="CompFlatteningConverter.html"]:before, .FrameItemFont a[href$="SBMLResolver.html"]:before, @@ -217,58 +247,58 @@ p a.el[href="group__render.html"] .indexContainer a[href$="SBMLResolverRegistry.html"]:before, .FrameItemFont a[href$="SBMLUri.html"]:before, .indexContainer a[href$="SBMLUri.html"]:before, +.FrameItemFont a[href$="SBMLFileResolver.html"]:before, +.indexContainer a[href$="SBMLFileResolver.html"]:before, +.FrameItemFont a[href$="CompValidator.html"]:before, +.indexContainer a[href$="CompValidator.html"]:before, .FrameItemFont a[href$="CompExtension.html"]:before, .indexContainer a[href$="CompExtension.html"]:before, .FrameItemFont a[href$="CompPkgNamespaces.html"]:before, .indexContainer a[href$="CompPkgNamespaces.html"]:before, -.FrameItemFont a[href$="CompSBMLDocumentPlugin.html"]:before, -.indexContainer a[href$="CompSBMLDocumentPlugin.html"]:before, -.FrameItemFont a[href$="CompModelPlugin.html"]:before, -.indexContainer a[href$="CompModelPlugin.html"]:before, .FrameItemFont a[href$="CompSBasePlugin.html"]:before, .indexContainer a[href$="CompSBasePlugin.html"]:before, -.FrameItemFont a[href$="ListOfExternalModelDefinitions.html"]:before, -.indexContainer a[href$="ListOfExternalModelDefinitions.html"]:before, -.FrameItemFont a[href$="ExternalModelDefinition.html"]:before, -.indexContainer a[href$="ExternalModelDefinition.html"]:before, -.FrameItemFont a[href$="SBaseRef.html"]:before, -.indexContainer a[href$="SBaseRef.html"]:before, -.FrameItemFont a[href$="ListOfDeletions.html"]:before, -.indexContainer a[href$="ListOfDeletions.html"]:before, -.FrameItemFont a[href$="Replacing.html"]:before, -.indexContainer a[href$="Replacing.html"]:before, -.FrameItemFont a[href$="CompBase.html"]:before, -.indexContainer a[href$="CompBase.html"]:before, -.FrameItemFont a[href$="Deletion.html"]:before, -.indexContainer a[href$="Deletion.html"]:before, -.FrameItemFont a[href$="ListOfPorts.html"]:before, -.indexContainer a[href$="ListOfPorts.html"]:before, -.FrameItemFont a[href$="ListOfModelDefinitions.html"]:before, -.indexContainer a[href$="ListOfModelDefinitions.html"]:before, -.FrameItemFont a[href$="ListOfSubmodels.html"]:before, -.indexContainer a[href$="ListOfSubmodels.html"]:before, -.FrameItemFont a[href$="ListOfReplacedElements.html"]:before, -.indexContainer a[href$="ListOfReplacedElements.html"]:before, -.FrameItemFont a[href$="ReplacedBy.html"]:before, -.indexContainer a[href$="ReplacedBy.html"]:before, -.FrameItemFont a[href$="ReplacedElement.html"]:before, -.indexContainer a[href$="ReplacedElement.html"]:before, -.FrameItemFont a[href$="Submodel.html"]:before, -.indexContainer a[href$="Submodel.html"]:before, -.FrameItemFont a[href$="ModelDefinition.html"]:before, -.indexContainer a[href$="ModelDefinition.html"]:before, -.FrameItemFont a[href$="Port.html"]:before, -.indexContainer a[href$="Port.html"]:before, -.FrameItemFont a[href$="CompValidator.html"]:before, -.indexContainer a[href$="CompValidator.html"]:before +.FrameItemFont a[href$="CompModelPlugin.html"]:before, +.indexContainer a[href$="CompModelPlugin.html"]:before, +.FrameItemFont a[href$="CompSBMLDocumentPlugin.html"]:before, +.indexContainer a[href$="CompSBMLDocumentPlugin.html"]:before { content: "\25cf"; color: rgb(220, 220, 220); margin-right: 0.25em; } -.FrameItemFont a[href$="SBMLFileResolver.html"]:after, -.indexContainer a[href$="SBMLFileResolver.html"]:after, +.FrameItemFont a[href$="ReplacedBy.html"]:after, +.indexContainer a[href$="ReplacedBy.html"]:after, +.FrameItemFont a[href$="Deletion.html"]:after, +.indexContainer a[href$="Deletion.html"]:after, +.FrameItemFont a[href$="Submodel.html"]:after, +.indexContainer a[href$="Submodel.html"]:after, +.FrameItemFont a[href$="ListOfExternalModelDefinitions.html"]:after, +.indexContainer a[href$="ListOfExternalModelDefinitions.html"]:after, +.FrameItemFont a[href$="Port.html"]:after, +.indexContainer a[href$="Port.html"]:after, +.FrameItemFont a[href$="ExternalModelDefinition.html"]:after, +.indexContainer a[href$="ExternalModelDefinition.html"]:after, +.FrameItemFont a[href$="ListOfDeletions.html"]:after, +.indexContainer a[href$="ListOfDeletions.html"]:after, +.FrameItemFont a[href$="SBaseRef.html"]:after, +.indexContainer a[href$="SBaseRef.html"]:after, +.FrameItemFont a[href$="ListOfSubmodels.html"]:after, +.indexContainer a[href$="ListOfSubmodels.html"]:after, +.FrameItemFont a[href$="ModelDefinition.html"]:after, +.indexContainer a[href$="ModelDefinition.html"]:after, +.FrameItemFont a[href$="ReplacedElement.html"]:after, +.indexContainer a[href$="ReplacedElement.html"]:after, +.FrameItemFont a[href$="ListOfPorts.html"]:after, +.indexContainer a[href$="ListOfPorts.html"]:after, +.FrameItemFont a[href$="CompBase.html"]:after, +.indexContainer a[href$="CompBase.html"]:after, +.FrameItemFont a[href$="ListOfReplacedElements.html"]:after, +.indexContainer a[href$="ListOfReplacedElements.html"]:after, +.FrameItemFont a[href$="Replacing.html"]:after, +.indexContainer a[href$="Replacing.html"]:after, +.FrameItemFont a[href$="ListOfModelDefinitions.html"]:after, +.indexContainer a[href$="ListOfModelDefinitions.html"]:after, .FrameItemFont a[href$="CompFlatteningConverter.html"]:after, .indexContainer a[href$="CompFlatteningConverter.html"]:after, .FrameItemFont a[href$="SBMLResolver.html"]:after, @@ -277,50 +307,20 @@ p a.el[href="group__render.html"] .indexContainer a[href$="SBMLResolverRegistry.html"]:after, .FrameItemFont a[href$="SBMLUri.html"]:after, .indexContainer a[href$="SBMLUri.html"]:after, +.FrameItemFont a[href$="SBMLFileResolver.html"]:after, +.indexContainer a[href$="SBMLFileResolver.html"]:after, +.FrameItemFont a[href$="CompValidator.html"]:after, +.indexContainer a[href$="CompValidator.html"]:after, .FrameItemFont a[href$="CompExtension.html"]:after, .indexContainer a[href$="CompExtension.html"]:after, .FrameItemFont a[href$="CompPkgNamespaces.html"]:after, .indexContainer a[href$="CompPkgNamespaces.html"]:after, -.FrameItemFont a[href$="CompSBMLDocumentPlugin.html"]:after, -.indexContainer a[href$="CompSBMLDocumentPlugin.html"]:after, -.FrameItemFont a[href$="CompModelPlugin.html"]:after, -.indexContainer a[href$="CompModelPlugin.html"]:after, .FrameItemFont a[href$="CompSBasePlugin.html"]:after, .indexContainer a[href$="CompSBasePlugin.html"]:after, -.FrameItemFont a[href$="ListOfExternalModelDefinitions.html"]:after, -.indexContainer a[href$="ListOfExternalModelDefinitions.html"]:after, -.FrameItemFont a[href$="ExternalModelDefinition.html"]:after, -.indexContainer a[href$="ExternalModelDefinition.html"]:after, -.FrameItemFont a[href$="SBaseRef.html"]:after, -.indexContainer a[href$="SBaseRef.html"]:after, -.FrameItemFont a[href$="ListOfDeletions.html"]:after, -.indexContainer a[href$="ListOfDeletions.html"]:after, -.FrameItemFont a[href$="Replacing.html"]:after, -.indexContainer a[href$="Replacing.html"]:after, -.FrameItemFont a[href$="CompBase.html"]:after, -.indexContainer a[href$="CompBase.html"]:after, -.FrameItemFont a[href$="Deletion.html"]:after, -.indexContainer a[href$="Deletion.html"]:after, -.FrameItemFont a[href$="ListOfPorts.html"]:after, -.indexContainer a[href$="ListOfPorts.html"]:after, -.FrameItemFont a[href$="ListOfModelDefinitions.html"]:after, -.indexContainer a[href$="ListOfModelDefinitions.html"]:after, -.FrameItemFont a[href$="ListOfSubmodels.html"]:after, -.indexContainer a[href$="ListOfSubmodels.html"]:after, -.FrameItemFont a[href$="ListOfReplacedElements.html"]:after, -.indexContainer a[href$="ListOfReplacedElements.html"]:after, -.FrameItemFont a[href$="ReplacedBy.html"]:after, -.indexContainer a[href$="ReplacedBy.html"]:after, -.FrameItemFont a[href$="ReplacedElement.html"]:after, -.indexContainer a[href$="ReplacedElement.html"]:after, -.FrameItemFont a[href$="Submodel.html"]:after, -.indexContainer a[href$="Submodel.html"]:after, -.FrameItemFont a[href$="ModelDefinition.html"]:after, -.indexContainer a[href$="ModelDefinition.html"]:after, -.FrameItemFont a[href$="Port.html"]:after, -.indexContainer a[href$="Port.html"]:after, -.FrameItemFont a[href$="CompValidator.html"]:after, -.indexContainer a[href$="CompValidator.html"]:after +.FrameItemFont a[href$="CompModelPlugin.html"]:after, +.indexContainer a[href$="CompModelPlugin.html"]:after, +.FrameItemFont a[href$="CompSBMLDocumentPlugin.html"]:after, +.indexContainer a[href$="CompSBMLDocumentPlugin.html"]:after { content: "comp"; display: inline-block; @@ -345,231 +345,231 @@ p a.el[href="group__render.html"] /* Styling for package 'fbc' used in libSBML Javadoc output */ -.FrameItemFont a[href$="FbcToCobraConverter.html"], -.indexContainer a[href$="FbcToCobraConverter.html"], -.FrameItemFont a[href$="FbcV2ToV1Converter.html"], -.indexContainer a[href$="FbcV2ToV1Converter.html"], -.FrameItemFont a[href$="CobraToFbcConverter.html"], -.indexContainer 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-.indexContainer a[href$="UserDefinedConstraint.html"]:before, +.FrameItemFont a[href$="UserDefinedConstraintComponent.html"]:before, +.indexContainer a[href$="UserDefinedConstraintComponent.html"]:before, .FrameItemFont a[href$="ListOfUserDefinedConstraintComponents.html"]:before, .indexContainer a[href$="ListOfUserDefinedConstraintComponents.html"]:before, -.FrameItemFont a[href$="FbcOr.html"]:before, -.indexContainer a[href$="FbcOr.html"]:before, +.FrameItemFont a[href$="Objective.html"]:before, +.indexContainer a[href$="Objective.html"]:before, +.FrameItemFont a[href$="ListOfObjectives.html"]:before, +.indexContainer a[href$="ListOfObjectives.html"]:before, +.FrameItemFont a[href$="Association.html"]:before, +.indexContainer a[href$="Association.html"]:before, +.FrameItemFont a[href$="FbcV2ToV1Converter.html"]:before, +.indexContainer a[href$="FbcV2ToV1Converter.html"]:before, +.FrameItemFont a[href$="FbcToCobraConverter.html"]:before, +.indexContainer a[href$="FbcToCobraConverter.html"]:before, +.FrameItemFont a[href$="CobraToFbcConverter.html"]:before, +.indexContainer a[href$="CobraToFbcConverter.html"]:before, +.FrameItemFont a[href$="FbcV1ToV2Converter.html"]:before, +.indexContainer a[href$="FbcV1ToV2Converter.html"]:before, .FrameItemFont a[href$="FbcValidator.html"]:before, -.indexContainer a[href$="FbcValidator.html"]:before +.indexContainer a[href$="FbcValidator.html"]:before, +.FrameItemFont a[href$="FbcSpeciesPlugin.html"]:before, +.indexContainer a[href$="FbcSpeciesPlugin.html"]:before, +.FrameItemFont a[href$="FbcSBMLDocumentPlugin.html"]:before, +.indexContainer a[href$="FbcSBMLDocumentPlugin.html"]:before, +.FrameItemFont a[href$="FbcSBasePlugin.html"]:before, +.indexContainer a[href$="FbcSBasePlugin.html"]:before, +.FrameItemFont a[href$="FbcExtension.html"]:before, +.indexContainer a[href$="FbcExtension.html"]:before, +.FrameItemFont a[href$="FbcPkgNamespaces.html"]:before, +.indexContainer 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+.FrameItemFont a[href$="ListOfObjectives.html"]:after, +.indexContainer a[href$="ListOfObjectives.html"]:after, +.FrameItemFont a[href$="Association.html"]:after, +.indexContainer a[href$="Association.html"]:after, +.FrameItemFont a[href$="FbcV2ToV1Converter.html"]:after, +.indexContainer a[href$="FbcV2ToV1Converter.html"]:after, +.FrameItemFont a[href$="FbcToCobraConverter.html"]:after, +.indexContainer a[href$="FbcToCobraConverter.html"]:after, +.FrameItemFont a[href$="CobraToFbcConverter.html"]:after, +.indexContainer a[href$="CobraToFbcConverter.html"]:after, +.FrameItemFont a[href$="FbcV1ToV2Converter.html"]:after, +.indexContainer a[href$="FbcV1ToV2Converter.html"]:after, +.FrameItemFont a[href$="FbcValidator.html"]:after, +.indexContainer a[href$="FbcValidator.html"]:after, +.FrameItemFont a[href$="FbcSpeciesPlugin.html"]:after, +.indexContainer a[href$="FbcSpeciesPlugin.html"]:after, +.FrameItemFont a[href$="FbcSBMLDocumentPlugin.html"]:after, +.indexContainer a[href$="FbcSBMLDocumentPlugin.html"]:after, +.FrameItemFont a[href$="FbcSBasePlugin.html"]:after, +.indexContainer a[href$="FbcSBasePlugin.html"]:after, +.FrameItemFont a[href$="FbcExtension.html"]:after, +.indexContainer a[href$="FbcExtension.html"]:after, +.FrameItemFont a[href$="FbcPkgNamespaces.html"]:after, +.indexContainer a[href$="FbcPkgNamespaces.html"]:after, +.FrameItemFont a[href$="FbcReactionPlugin.html"]:after, +.indexContainer a[href$="FbcReactionPlugin.html"]:after, +.FrameItemFont a[href$="FbcModelPlugin.html"]:after, +.indexContainer a[href$="FbcModelPlugin.html"]:after +{ + content: "fbc"; + display: inline-block; + font-family: "Noto Sans", Verdana, Helvetica, Arial, Sans, sans-serif; font-size: 80%; font-style: italic; font-weight: normal; @@ -590,48 +590,34 @@ p a.el[href="group__render.html"] /* Styling for package 'layout' used in libSBML Javadoc output */ -.FrameItemFont a[href$="LayoutExtension.html"], -.indexContainer a[href$="LayoutExtension.html"], 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.FrameItemFont a[href$="ListOfSpeciesReferenceGlyphs.html"], .indexContainer a[href$="ListOfSpeciesReferenceGlyphs.html"], .FrameItemFont a[href$="ReferenceGlyph.html"], .indexContainer a[href$="ReferenceGlyph.html"], -.FrameItemFont a[href$="SpeciesGlyph.html"], -.indexContainer a[href$="SpeciesGlyph.html"], -.FrameItemFont a[href$="CubicBezier.html"], -.indexContainer a[href$="CubicBezier.html"], -.FrameItemFont a[href$="LineSegment.html"], -.indexContainer a[href$="LineSegment.html"], +.FrameItemFont a[href$="Point.html"], +.indexContainer a[href$="Point.html"], +.FrameItemFont a[href$="BoundingBox.html"], +.indexContainer a[href$="BoundingBox.html"], .FrameItemFont a[href$="Layout.html"], .indexContainer a[href$="Layout.html"], .FrameItemFont a[href$="ListOfCompartmentGlyphs.html"], @@ -644,59 +630,59 @@ p a.el[href="group__render.html"] .indexContainer a[href$="ListOfTextGlyphs.html"], .FrameItemFont a[href$="ListOfLayouts.html"], .indexContainer a[href$="ListOfLayouts.html"], -.FrameItemFont a[href$="GraphicalObject.html"], -.indexContainer a[href$="GraphicalObject.html"], -.FrameItemFont a[href$="ListOfGraphicalObjects.html"], -.indexContainer a[href$="ListOfGraphicalObjects.html"], +.FrameItemFont a[href$="CompartmentGlyph.html"], +.indexContainer a[href$="CompartmentGlyph.html"], +.FrameItemFont a[href$="Curve.html"], +.indexContainer a[href$="Curve.html"], +.FrameItemFont a[href$="ListOfLineSegments.html"], +.indexContainer a[href$="ListOfLineSegments.html"], +.FrameItemFont a[href$="SpeciesGlyph.html"], +.indexContainer a[href$="SpeciesGlyph.html"], .FrameItemFont a[href$="LayoutValidator.html"], -.indexContainer a[href$="LayoutValidator.html"] +.indexContainer a[href$="LayoutValidator.html"], +.FrameItemFont a[href$="LayoutExtension.html"], +.indexContainer a[href$="LayoutExtension.html"], +.FrameItemFont a[href$="LayoutPkgNamespaces.html"], +.indexContainer a[href$="LayoutPkgNamespaces.html"], +.FrameItemFont a[href$="LayoutSpeciesReferencePlugin.html"], +.indexContainer a[href$="LayoutSpeciesReferencePlugin.html"], +.FrameItemFont a[href$="LayoutSBMLDocumentPlugin.html"], +.indexContainer a[href$="LayoutSBMLDocumentPlugin.html"], +.FrameItemFont a[href$="LayoutModelPlugin.html"], +.indexContainer a[href$="LayoutModelPlugin.html"] { display: inline-block; margin-left: 0px; } -.FrameItemFont a[href$="LayoutExtension.html"]:before, -.indexContainer a[href$="LayoutExtension.html"]:before, -.FrameItemFont a[href$="LayoutPkgNamespaces.html"]:before, -.indexContainer a[href$="LayoutPkgNamespaces.html"]:before, -.FrameItemFont a[href$="LayoutSpeciesReferencePlugin.html"]:before, -.indexContainer a[href$="LayoutSpeciesReferencePlugin.html"]:before, -.FrameItemFont a[href$="LayoutSBMLDocumentPlugin.html"]:before, -.indexContainer a[href$="LayoutSBMLDocumentPlugin.html"]:before, -.FrameItemFont a[href$="LayoutModelPlugin.html"]:before, -.indexContainer a[href$="LayoutModelPlugin.html"]:before, .FrameItemFont a[href$="GeneralGlyph.html"]:before, .indexContainer a[href$="GeneralGlyph.html"]:before, .FrameItemFont a[href$="ListOfReferenceGlyphs.html"]:before, .indexContainer a[href$="ListOfReferenceGlyphs.html"]:before, .FrameItemFont a[href$="Dimensions.html"]:before, .indexContainer a[href$="Dimensions.html"]:before, -.FrameItemFont a[href$="SpeciesReferenceGlyph.html"]:before, -.indexContainer a[href$="SpeciesReferenceGlyph.html"]:before, -.FrameItemFont a[href$="Point.html"]:before, -.indexContainer a[href$="Point.html"]:before, -.FrameItemFont a[href$="BoundingBox.html"]:before, -.indexContainer a[href$="BoundingBox.html"]:before, -.FrameItemFont a[href$="Curve.html"]:before, -.indexContainer a[href$="Curve.html"]:before, -.FrameItemFont a[href$="ListOfLineSegments.html"]:before, -.indexContainer a[href$="ListOfLineSegments.html"]:before, -.FrameItemFont a[href$="CompartmentGlyph.html"]:before, -.indexContainer a[href$="CompartmentGlyph.html"]:before, +.FrameItemFont a[href$="CubicBezier.html"]:before, +.indexContainer a[href$="CubicBezier.html"]:before, +.FrameItemFont a[href$="GraphicalObject.html"]:before, +.indexContainer a[href$="GraphicalObject.html"]:before, +.FrameItemFont a[href$="ListOfGraphicalObjects.html"]:before, +.indexContainer a[href$="ListOfGraphicalObjects.html"]:before, .FrameItemFont a[href$="TextGlyph.html"]:before, .indexContainer a[href$="TextGlyph.html"]:before, +.FrameItemFont a[href$="SpeciesReferenceGlyph.html"]:before, +.indexContainer a[href$="SpeciesReferenceGlyph.html"]:before, +.FrameItemFont a[href$="LineSegment.html"]:before, +.indexContainer a[href$="LineSegment.html"]:before, .FrameItemFont a[href$="ReactionGlyph.html"]:before, .indexContainer a[href$="ReactionGlyph.html"]:before, .FrameItemFont a[href$="ListOfSpeciesReferenceGlyphs.html"]:before, .indexContainer a[href$="ListOfSpeciesReferenceGlyphs.html"]:before, .FrameItemFont a[href$="ReferenceGlyph.html"]:before, .indexContainer a[href$="ReferenceGlyph.html"]:before, -.FrameItemFont a[href$="SpeciesGlyph.html"]:before, -.indexContainer a[href$="SpeciesGlyph.html"]:before, -.FrameItemFont a[href$="CubicBezier.html"]:before, -.indexContainer a[href$="CubicBezier.html"]:before, -.FrameItemFont a[href$="LineSegment.html"]:before, -.indexContainer a[href$="LineSegment.html"]:before, +.FrameItemFont a[href$="Point.html"]:before, +.indexContainer a[href$="Point.html"]:before, +.FrameItemFont a[href$="BoundingBox.html"]:before, +.indexContainer a[href$="BoundingBox.html"]:before, .FrameItemFont a[href$="Layout.html"]:before, .indexContainer a[href$="Layout.html"]:before, .FrameItemFont a[href$="ListOfCompartmentGlyphs.html"]:before, @@ -709,60 +695,60 @@ p a.el[href="group__render.html"] .indexContainer a[href$="ListOfTextGlyphs.html"]:before, .FrameItemFont a[href$="ListOfLayouts.html"]:before, .indexContainer a[href$="ListOfLayouts.html"]:before, -.FrameItemFont a[href$="GraphicalObject.html"]:before, -.indexContainer a[href$="GraphicalObject.html"]:before, -.FrameItemFont a[href$="ListOfGraphicalObjects.html"]:before, -.indexContainer a[href$="ListOfGraphicalObjects.html"]:before, +.FrameItemFont a[href$="CompartmentGlyph.html"]:before, +.indexContainer a[href$="CompartmentGlyph.html"]:before, +.FrameItemFont a[href$="Curve.html"]:before, +.indexContainer a[href$="Curve.html"]:before, +.FrameItemFont a[href$="ListOfLineSegments.html"]:before, +.indexContainer a[href$="ListOfLineSegments.html"]:before, +.FrameItemFont a[href$="SpeciesGlyph.html"]:before, +.indexContainer a[href$="SpeciesGlyph.html"]:before, .FrameItemFont a[href$="LayoutValidator.html"]:before, -.indexContainer a[href$="LayoutValidator.html"]:before +.indexContainer a[href$="LayoutValidator.html"]:before, +.FrameItemFont a[href$="LayoutExtension.html"]:before, +.indexContainer a[href$="LayoutExtension.html"]:before, +.FrameItemFont a[href$="LayoutPkgNamespaces.html"]:before, +.indexContainer a[href$="LayoutPkgNamespaces.html"]:before, +.FrameItemFont a[href$="LayoutSpeciesReferencePlugin.html"]:before, +.indexContainer a[href$="LayoutSpeciesReferencePlugin.html"]:before, +.FrameItemFont a[href$="LayoutSBMLDocumentPlugin.html"]:before, +.indexContainer a[href$="LayoutSBMLDocumentPlugin.html"]:before, +.FrameItemFont a[href$="LayoutModelPlugin.html"]:before, +.indexContainer a[href$="LayoutModelPlugin.html"]:before { content: "\25cf"; color: rgb(250, 230, 170); margin-right: 0.25em; } -.FrameItemFont a[href$="LayoutExtension.html"]:after, -.indexContainer a[href$="LayoutExtension.html"]:after, -.FrameItemFont a[href$="LayoutPkgNamespaces.html"]:after, -.indexContainer a[href$="LayoutPkgNamespaces.html"]:after, -.FrameItemFont a[href$="LayoutSpeciesReferencePlugin.html"]:after, -.indexContainer a[href$="LayoutSpeciesReferencePlugin.html"]:after, -.FrameItemFont a[href$="LayoutSBMLDocumentPlugin.html"]:after, -.indexContainer a[href$="LayoutSBMLDocumentPlugin.html"]:after, -.FrameItemFont a[href$="LayoutModelPlugin.html"]:after, -.indexContainer a[href$="LayoutModelPlugin.html"]:after, .FrameItemFont a[href$="GeneralGlyph.html"]:after, .indexContainer a[href$="GeneralGlyph.html"]:after, .FrameItemFont a[href$="ListOfReferenceGlyphs.html"]:after, .indexContainer a[href$="ListOfReferenceGlyphs.html"]:after, .FrameItemFont a[href$="Dimensions.html"]:after, .indexContainer a[href$="Dimensions.html"]:after, -.FrameItemFont a[href$="SpeciesReferenceGlyph.html"]:after, -.indexContainer a[href$="SpeciesReferenceGlyph.html"]:after, -.FrameItemFont a[href$="Point.html"]:after, -.indexContainer a[href$="Point.html"]:after, -.FrameItemFont a[href$="BoundingBox.html"]:after, -.indexContainer a[href$="BoundingBox.html"]:after, -.FrameItemFont a[href$="Curve.html"]:after, -.indexContainer a[href$="Curve.html"]:after, -.FrameItemFont a[href$="ListOfLineSegments.html"]:after, -.indexContainer a[href$="ListOfLineSegments.html"]:after, -.FrameItemFont a[href$="CompartmentGlyph.html"]:after, -.indexContainer a[href$="CompartmentGlyph.html"]:after, +.FrameItemFont a[href$="CubicBezier.html"]:after, +.indexContainer a[href$="CubicBezier.html"]:after, +.FrameItemFont a[href$="GraphicalObject.html"]:after, +.indexContainer a[href$="GraphicalObject.html"]:after, +.FrameItemFont a[href$="ListOfGraphicalObjects.html"]:after, +.indexContainer a[href$="ListOfGraphicalObjects.html"]:after, .FrameItemFont a[href$="TextGlyph.html"]:after, .indexContainer a[href$="TextGlyph.html"]:after, +.FrameItemFont a[href$="SpeciesReferenceGlyph.html"]:after, +.indexContainer a[href$="SpeciesReferenceGlyph.html"]:after, +.FrameItemFont a[href$="LineSegment.html"]:after, +.indexContainer a[href$="LineSegment.html"]:after, .FrameItemFont a[href$="ReactionGlyph.html"]:after, .indexContainer a[href$="ReactionGlyph.html"]:after, .FrameItemFont a[href$="ListOfSpeciesReferenceGlyphs.html"]:after, .indexContainer a[href$="ListOfSpeciesReferenceGlyphs.html"]:after, .FrameItemFont a[href$="ReferenceGlyph.html"]:after, .indexContainer a[href$="ReferenceGlyph.html"]:after, -.FrameItemFont a[href$="SpeciesGlyph.html"]:after, -.indexContainer a[href$="SpeciesGlyph.html"]:after, -.FrameItemFont a[href$="CubicBezier.html"]:after, -.indexContainer a[href$="CubicBezier.html"]:after, -.FrameItemFont a[href$="LineSegment.html"]:after, -.indexContainer a[href$="LineSegment.html"]:after, +.FrameItemFont a[href$="Point.html"]:after, +.indexContainer a[href$="Point.html"]:after, +.FrameItemFont a[href$="BoundingBox.html"]:after, +.indexContainer a[href$="BoundingBox.html"]:after, .FrameItemFont a[href$="Layout.html"]:after, .indexContainer a[href$="Layout.html"]:after, .FrameItemFont a[href$="ListOfCompartmentGlyphs.html"]:after, @@ -775,12 +761,26 @@ p a.el[href="group__render.html"] .indexContainer a[href$="ListOfTextGlyphs.html"]:after, .FrameItemFont a[href$="ListOfLayouts.html"]:after, .indexContainer a[href$="ListOfLayouts.html"]:after, -.FrameItemFont a[href$="GraphicalObject.html"]:after, -.indexContainer a[href$="GraphicalObject.html"]:after, -.FrameItemFont a[href$="ListOfGraphicalObjects.html"]:after, -.indexContainer a[href$="ListOfGraphicalObjects.html"]:after, +.FrameItemFont a[href$="CompartmentGlyph.html"]:after, +.indexContainer a[href$="CompartmentGlyph.html"]:after, +.FrameItemFont a[href$="Curve.html"]:after, +.indexContainer a[href$="Curve.html"]:after, +.FrameItemFont a[href$="ListOfLineSegments.html"]:after, +.indexContainer a[href$="ListOfLineSegments.html"]:after, +.FrameItemFont a[href$="SpeciesGlyph.html"]:after, +.indexContainer a[href$="SpeciesGlyph.html"]:after, .FrameItemFont a[href$="LayoutValidator.html"]:after, -.indexContainer a[href$="LayoutValidator.html"]:after +.indexContainer a[href$="LayoutValidator.html"]:after, +.FrameItemFont a[href$="LayoutExtension.html"]:after, +.indexContainer a[href$="LayoutExtension.html"]:after, +.FrameItemFont a[href$="LayoutPkgNamespaces.html"]:after, +.indexContainer a[href$="LayoutPkgNamespaces.html"]:after, +.FrameItemFont a[href$="LayoutSpeciesReferencePlugin.html"]:after, +.indexContainer a[href$="LayoutSpeciesReferencePlugin.html"]:after, +.FrameItemFont a[href$="LayoutSBMLDocumentPlugin.html"]:after, +.indexContainer a[href$="LayoutSBMLDocumentPlugin.html"]:after, +.FrameItemFont a[href$="LayoutModelPlugin.html"]:after, +.indexContainer a[href$="LayoutModelPlugin.html"]:after { content: "layout"; display: inline-block; @@ -805,113 +805,113 @@ p a.el[href="group__render.html"] /* Styling for package 'qual' used in libSBML Javadoc output */ -.FrameItemFont a[href$="QualExtension.html"], -.indexContainer a[href$="QualExtension.html"], -.FrameItemFont a[href$="QualPkgNamespaces.html"], -.indexContainer a[href$="QualPkgNamespaces.html"], -.FrameItemFont a[href$="QualSBMLDocumentPlugin.html"], -.indexContainer a[href$="QualSBMLDocumentPlugin.html"], -.FrameItemFont a[href$="QualModelPlugin.html"], -.indexContainer a[href$="QualModelPlugin.html"], 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a[href$="ListOfOutputs.html"], +.indexContainer a[href$="ListOfOutputs.html"], +.FrameItemFont a[href$="DefaultTerm.html"], +.indexContainer a[href$="DefaultTerm.html"], +.FrameItemFont a[href$="Transition.html"], +.indexContainer a[href$="Transition.html"], +.FrameItemFont a[href$="ListOfTransitions.html"], +.indexContainer a[href$="ListOfTransitions.html"], +.FrameItemFont a[href$="QualitativeSpecies.html"], +.indexContainer a[href$="QualitativeSpecies.html"], +.FrameItemFont a[href$="ListOfQualitativeSpecies.html"], +.indexContainer a[href$="ListOfQualitativeSpecies.html"], .FrameItemFont a[href$="Input.html"], .indexContainer a[href$="Input.html"], .FrameItemFont a[href$="ListOfInputs.html"], .indexContainer a[href$="ListOfInputs.html"], .FrameItemFont a[href$="QualValidator.html"], -.indexContainer a[href$="QualValidator.html"] -{ - display: inline-block; - margin-left: 0px; +.indexContainer a[href$="QualValidator.html"], +.FrameItemFont a[href$="QualSBMLDocumentPlugin.html"], +.indexContainer a[href$="QualSBMLDocumentPlugin.html"], +.FrameItemFont a[href$="QualModelPlugin.html"], +.indexContainer a[href$="QualModelPlugin.html"], +.FrameItemFont a[href$="QualExtension.html"], +.indexContainer a[href$="QualExtension.html"], +.FrameItemFont a[href$="QualPkgNamespaces.html"], +.indexContainer a[href$="QualPkgNamespaces.html"] +{ + display: inline-block; + margin-left: 0px; } -.FrameItemFont a[href$="QualExtension.html"]:before, -.indexContainer a[href$="QualExtension.html"]:before, -.FrameItemFont a[href$="QualPkgNamespaces.html"]:before, -.indexContainer a[href$="QualPkgNamespaces.html"]:before, -.FrameItemFont a[href$="QualSBMLDocumentPlugin.html"]:before, -.indexContainer a[href$="QualSBMLDocumentPlugin.html"]:before, -.FrameItemFont a[href$="QualModelPlugin.html"]:before, -.indexContainer a[href$="QualModelPlugin.html"]:before, -.FrameItemFont a[href$="QualitativeSpecies.html"]:before, -.indexContainer a[href$="QualitativeSpecies.html"]:before, 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a[href$="QualModelPlugin.html"]:after, -.FrameItemFont a[href$="QualitativeSpecies.html"]:after, -.indexContainer a[href$="QualitativeSpecies.html"]:after, -.FrameItemFont a[href$="ListOfQualitativeSpecies.html"]:after, -.indexContainer a[href$="ListOfQualitativeSpecies.html"]:after, -.FrameItemFont a[href$="Transition.html"]:after, -.indexContainer a[href$="Transition.html"]:after, -.FrameItemFont a[href$="ListOfTransitions.html"]:after, -.indexContainer a[href$="ListOfTransitions.html"]:after, -.FrameItemFont a[href$="DefaultTerm.html"]:after, -.indexContainer a[href$="DefaultTerm.html"]:after, -.FrameItemFont a[href$="Output.html"]:after, -.indexContainer a[href$="Output.html"]:after, -.FrameItemFont a[href$="ListOfOutputs.html"]:after, -.indexContainer a[href$="ListOfOutputs.html"]:after, .FrameItemFont a[href$="FunctionTerm.html"]:after, .indexContainer a[href$="FunctionTerm.html"]:after, .FrameItemFont a[href$="ListOfFunctionTerms.html"]:after, .indexContainer a[href$="ListOfFunctionTerms.html"]:after, +.FrameItemFont a[href$="Output.html"]:after, +.indexContainer a[href$="Output.html"]:after, +.FrameItemFont a[href$="ListOfOutputs.html"]:after, +.indexContainer a[href$="ListOfOutputs.html"]:after, +.FrameItemFont a[href$="DefaultTerm.html"]:after, +.indexContainer a[href$="DefaultTerm.html"]:after, +.FrameItemFont a[href$="Transition.html"]:after, +.indexContainer a[href$="Transition.html"]:after, +.FrameItemFont a[href$="ListOfTransitions.html"]:after, +.indexContainer a[href$="ListOfTransitions.html"]:after, +.FrameItemFont a[href$="QualitativeSpecies.html"]:after, +.indexContainer a[href$="QualitativeSpecies.html"]:after, +.FrameItemFont a[href$="ListOfQualitativeSpecies.html"]:after, +.indexContainer a[href$="ListOfQualitativeSpecies.html"]:after, .FrameItemFont a[href$="Input.html"]:after, .indexContainer a[href$="Input.html"]:after, .FrameItemFont a[href$="ListOfInputs.html"]:after, .indexContainer a[href$="ListOfInputs.html"]:after, .FrameItemFont a[href$="QualValidator.html"]:after, -.indexContainer a[href$="QualValidator.html"]:after +.indexContainer a[href$="QualValidator.html"]:after, +.FrameItemFont a[href$="QualSBMLDocumentPlugin.html"]:after, +.indexContainer a[href$="QualSBMLDocumentPlugin.html"]:after, +.FrameItemFont a[href$="QualModelPlugin.html"]:after, +.indexContainer a[href$="QualModelPlugin.html"]:after, +.FrameItemFont a[href$="QualExtension.html"]:after, +.indexContainer a[href$="QualExtension.html"]:after, +.FrameItemFont a[href$="QualPkgNamespaces.html"]:after, +.indexContainer a[href$="QualPkgNamespaces.html"]:after { content: "qual"; display: inline-block; @@ -936,233 +936,233 @@ p a.el[href="group__render.html"] /* Styling for package 'multi' used in libSBML Javadoc output */ -.FrameItemFont a[href$="MultiCompartmentPlugin.html"], -.indexContainer a[href$="MultiCompartmentPlugin.html"], -.FrameItemFont a[href$="MultiSBMLDocumentPlugin.html"], -.indexContainer 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a[href$="MultiListOfReactionsPlugin.html"], +.indexContainer a[href$="MultiListOfReactionsPlugin.html"], +.FrameItemFont a[href$="MultiSimpleSpeciesReferencePlugin.html"], +.indexContainer a[href$="MultiSimpleSpeciesReferencePlugin.html"], +.FrameItemFont a[href$="MultiSBMLDocumentPlugin.html"], +.indexContainer a[href$="MultiSBMLDocumentPlugin.html"], +.FrameItemFont a[href$="MultiASTPlugin.html"], +.indexContainer a[href$="MultiASTPlugin.html"], +.FrameItemFont a[href$="MultiCompartmentPlugin.html"], +.indexContainer a[href$="MultiCompartmentPlugin.html"], +.FrameItemFont a[href$="MultiExtension.html"], +.indexContainer a[href$="MultiExtension.html"], +.FrameItemFont a[href$="MultiPkgNamespaces.html"], +.indexContainer a[href$="MultiPkgNamespaces.html"] { display: inline-block; margin-left: 0px; } -.FrameItemFont a[href$="MultiCompartmentPlugin.html"]:before, -.indexContainer a[href$="MultiCompartmentPlugin.html"]:before, -.FrameItemFont 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+.indexContainer a[href$="OutwardBindingSite.html"]:before, +.FrameItemFont a[href$="ListOfOutwardBindingSites.html"]:before, +.indexContainer a[href$="ListOfOutwardBindingSites.html"]:before, .FrameItemFont a[href$="SpeciesTypeComponentIndex.html"]:before, .indexContainer a[href$="SpeciesTypeComponentIndex.html"]:before, .FrameItemFont a[href$="ListOfSpeciesTypeComponentIndexes.html"]:before, .indexContainer a[href$="ListOfSpeciesTypeComponentIndexes.html"]:before, -.FrameItemFont a[href$="IntraSpeciesReaction.html"]:before, -.indexContainer a[href$="IntraSpeciesReaction.html"]:before, -.FrameItemFont a[href$="InSpeciesTypeBond.html"]:before, -.indexContainer a[href$="InSpeciesTypeBond.html"]:before, -.FrameItemFont a[href$="ListOfInSpeciesTypeBonds.html"]:before, -.indexContainer a[href$="ListOfInSpeciesTypeBonds.html"]:before, -.FrameItemFont a[href$="SubListOfSpeciesFeatures.html"]:before, -.indexContainer a[href$="SubListOfSpeciesFeatures.html"]:before, +.FrameItemFont 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a[href$="ListOfSpeciesFeatureValues.html"]:before, +.FrameItemFont a[href$="SpeciesTypeInstance.html"]:before, +.indexContainer a[href$="SpeciesTypeInstance.html"]:before, +.FrameItemFont a[href$="ListOfSpeciesTypeInstances.html"]:before, +.indexContainer a[href$="ListOfSpeciesTypeInstances.html"]:before, +.FrameItemFont a[href$="IntraSpeciesReaction.html"]:before, +.indexContainer a[href$="IntraSpeciesReaction.html"]:before, .FrameItemFont a[href$="BindingSiteSpeciesType.html"]:before, .indexContainer a[href$="BindingSiteSpeciesType.html"]:before, -.FrameItemFont a[href$="MultiValidator.html"]:before, -.indexContainer a[href$="MultiValidator.html"]:before -{ - content: "\25cf"; +.FrameItemFont a[href$="SubListOfSpeciesFeatures.html"]:before, +.indexContainer a[href$="SubListOfSpeciesFeatures.html"]:before, +.FrameItemFont a[href$="InSpeciesTypeBond.html"]:before, +.indexContainer a[href$="InSpeciesTypeBond.html"]:before, +.FrameItemFont a[href$="ListOfInSpeciesTypeBonds.html"]:before, +.indexContainer a[href$="ListOfInSpeciesTypeBonds.html"]:before, +.FrameItemFont a[href$="SpeciesFeature.html"]:before, +.indexContainer a[href$="SpeciesFeature.html"]:before, +.FrameItemFont a[href$="ListOfSpeciesFeatures.html"]:before, +.indexContainer a[href$="ListOfSpeciesFeatures.html"]:before, +.FrameItemFont a[href$="MultiValidator.html"]:before, +.indexContainer a[href$="MultiValidator.html"]:before, +.FrameItemFont a[href$="MultiModelPlugin.html"]:before, +.indexContainer a[href$="MultiModelPlugin.html"]:before, +.FrameItemFont a[href$="MultiSpeciesPlugin.html"]:before, +.indexContainer a[href$="MultiSpeciesPlugin.html"]:before, +.FrameItemFont a[href$="MultiSpeciesReferencePlugin.html"]:before, +.indexContainer a[href$="MultiSpeciesReferencePlugin.html"]:before, +.FrameItemFont a[href$="MultiListOfReactionsPlugin.html"]:before, +.indexContainer a[href$="MultiListOfReactionsPlugin.html"]:before, +.FrameItemFont a[href$="MultiSimpleSpeciesReferencePlugin.html"]:before, +.indexContainer a[href$="MultiSimpleSpeciesReferencePlugin.html"]:before, +.FrameItemFont a[href$="MultiSBMLDocumentPlugin.html"]:before, +.indexContainer a[href$="MultiSBMLDocumentPlugin.html"]:before, +.FrameItemFont a[href$="MultiASTPlugin.html"]:before, +.indexContainer a[href$="MultiASTPlugin.html"]:before, +.FrameItemFont a[href$="MultiCompartmentPlugin.html"]:before, +.indexContainer a[href$="MultiCompartmentPlugin.html"]:before, +.FrameItemFont a[href$="MultiExtension.html"]:before, +.indexContainer a[href$="MultiExtension.html"]:before, +.FrameItemFont a[href$="MultiPkgNamespaces.html"]:before, +.indexContainer a[href$="MultiPkgNamespaces.html"]:before +{ + content: "\25cf"; color: rgb(120, 120, 120); margin-right: 0.25em; } -.FrameItemFont a[href$="MultiCompartmentPlugin.html"]:after, -.indexContainer a[href$="MultiCompartmentPlugin.html"]:after, -.FrameItemFont a[href$="MultiSBMLDocumentPlugin.html"]:after, -.indexContainer a[href$="MultiSBMLDocumentPlugin.html"]:after, -.FrameItemFont a[href$="MultiSimpleSpeciesReferencePlugin.html"]:after, -.indexContainer a[href$="MultiSimpleSpeciesReferencePlugin.html"]:after, -.FrameItemFont a[href$="MultiSpeciesPlugin.html"]:after, -.indexContainer a[href$="MultiSpeciesPlugin.html"]:after, -.FrameItemFont a[href$="MultiExtension.html"]:after, -.indexContainer a[href$="MultiExtension.html"]:after, -.FrameItemFont a[href$="MultiPkgNamespaces.html"]:after, -.indexContainer a[href$="MultiPkgNamespaces.html"]:after, -.FrameItemFont a[href$="MultiModelPlugin.html"]:after, -.indexContainer a[href$="MultiModelPlugin.html"]:after, -.FrameItemFont a[href$="MultiListOfReactionsPlugin.html"]:after, -.indexContainer a[href$="MultiListOfReactionsPlugin.html"]:after, -.FrameItemFont a[href$="MultiASTPlugin.html"]:after, -.indexContainer a[href$="MultiASTPlugin.html"]:after, -.FrameItemFont a[href$="MultiSpeciesReferencePlugin.html"]:after, -.indexContainer a[href$="MultiSpeciesReferencePlugin.html"]:after, -.FrameItemFont a[href$="SpeciesTypeInstance.html"]:after, -.indexContainer a[href$="SpeciesTypeInstance.html"]:after, -.FrameItemFont a[href$="ListOfSpeciesTypeInstances.html"]:after, -.indexContainer a[href$="ListOfSpeciesTypeInstances.html"]:after, -.FrameItemFont a[href$="CompartmentReference.html"]:after, -.indexContainer a[href$="CompartmentReference.html"]:after, -.FrameItemFont a[href$="ListOfCompartmentReferences.html"]:after, -.indexContainer a[href$="ListOfCompartmentReferences.html"]:after, .FrameItemFont a[href$="SpeciesTypeComponentMapInProduct.html"]:after, .indexContainer a[href$="SpeciesTypeComponentMapInProduct.html"]:after, .FrameItemFont a[href$="ListOfSpeciesTypeComponentMapInProducts.html"]:after, .indexContainer a[href$="ListOfSpeciesTypeComponentMapInProducts.html"]:after, +.FrameItemFont a[href$="OutwardBindingSite.html"]:after, +.indexContainer a[href$="OutwardBindingSite.html"]:after, +.FrameItemFont a[href$="ListOfOutwardBindingSites.html"]:after, +.indexContainer a[href$="ListOfOutwardBindingSites.html"]:after, .FrameItemFont a[href$="SpeciesTypeComponentIndex.html"]:after, .indexContainer a[href$="SpeciesTypeComponentIndex.html"]:after, .FrameItemFont a[href$="ListOfSpeciesTypeComponentIndexes.html"]:after, .indexContainer a[href$="ListOfSpeciesTypeComponentIndexes.html"]:after, -.FrameItemFont a[href$="IntraSpeciesReaction.html"]:after, -.indexContainer a[href$="IntraSpeciesReaction.html"]:after, -.FrameItemFont a[href$="InSpeciesTypeBond.html"]:after, -.indexContainer a[href$="InSpeciesTypeBond.html"]:after, -.FrameItemFont a[href$="ListOfInSpeciesTypeBonds.html"]:after, -.indexContainer a[href$="ListOfInSpeciesTypeBonds.html"]:after, -.FrameItemFont a[href$="SubListOfSpeciesFeatures.html"]:after, -.indexContainer a[href$="SubListOfSpeciesFeatures.html"]:after, +.FrameItemFont a[href$="CompartmentReference.html"]:after, +.indexContainer a[href$="CompartmentReference.html"]:after, +.FrameItemFont a[href$="ListOfCompartmentReferences.html"]:after, +.indexContainer a[href$="ListOfCompartmentReferences.html"]:after, .FrameItemFont a[href$="PossibleSpeciesFeatureValue.html"]:after, .indexContainer a[href$="PossibleSpeciesFeatureValue.html"]:after, .FrameItemFont a[href$="ListOfPossibleSpeciesFeatureValues.html"]:after, .indexContainer a[href$="ListOfPossibleSpeciesFeatureValues.html"]:after, -.FrameItemFont a[href$="OutwardBindingSite.html"]:after, -.indexContainer a[href$="OutwardBindingSite.html"]:after, -.FrameItemFont a[href$="ListOfOutwardBindingSites.html"]:after, -.indexContainer a[href$="ListOfOutwardBindingSites.html"]:after, -.FrameItemFont a[href$="SpeciesFeature.html"]:after, -.indexContainer a[href$="SpeciesFeature.html"]:after, -.FrameItemFont a[href$="ListOfSpeciesFeatures.html"]:after, -.indexContainer a[href$="ListOfSpeciesFeatures.html"]:after, -.FrameItemFont a[href$="SpeciesFeatureType.html"]:after, -.indexContainer a[href$="SpeciesFeatureType.html"]:after, -.FrameItemFont a[href$="ListOfSpeciesFeatureTypes.html"]:after, -.indexContainer a[href$="ListOfSpeciesFeatureTypes.html"]:after, .FrameItemFont a[href$="MultiSpeciesType.html"]:after, .indexContainer a[href$="MultiSpeciesType.html"]:after, .FrameItemFont a[href$="ListOfMultiSpeciesTypes.html"]:after, .indexContainer a[href$="ListOfMultiSpeciesTypes.html"]:after, +.FrameItemFont a[href$="SpeciesFeatureType.html"]:after, +.indexContainer a[href$="SpeciesFeatureType.html"]:after, +.FrameItemFont a[href$="ListOfSpeciesFeatureTypes.html"]:after, +.indexContainer a[href$="ListOfSpeciesFeatureTypes.html"]:after, .FrameItemFont a[href$="SpeciesFeatureValue.html"]:after, .indexContainer a[href$="SpeciesFeatureValue.html"]:after, .FrameItemFont a[href$="ListOfSpeciesFeatureValues.html"]:after, .indexContainer a[href$="ListOfSpeciesFeatureValues.html"]:after, +.FrameItemFont a[href$="SpeciesTypeInstance.html"]:after, +.indexContainer a[href$="SpeciesTypeInstance.html"]:after, +.FrameItemFont a[href$="ListOfSpeciesTypeInstances.html"]:after, +.indexContainer a[href$="ListOfSpeciesTypeInstances.html"]:after, +.FrameItemFont a[href$="IntraSpeciesReaction.html"]:after, +.indexContainer a[href$="IntraSpeciesReaction.html"]:after, .FrameItemFont a[href$="BindingSiteSpeciesType.html"]:after, .indexContainer a[href$="BindingSiteSpeciesType.html"]:after, +.FrameItemFont a[href$="SubListOfSpeciesFeatures.html"]:after, +.indexContainer a[href$="SubListOfSpeciesFeatures.html"]:after, +.FrameItemFont a[href$="InSpeciesTypeBond.html"]:after, +.indexContainer a[href$="InSpeciesTypeBond.html"]:after, +.FrameItemFont a[href$="ListOfInSpeciesTypeBonds.html"]:after, +.indexContainer a[href$="ListOfInSpeciesTypeBonds.html"]:after, +.FrameItemFont a[href$="SpeciesFeature.html"]:after, +.indexContainer a[href$="SpeciesFeature.html"]:after, +.FrameItemFont a[href$="ListOfSpeciesFeatures.html"]:after, +.indexContainer a[href$="ListOfSpeciesFeatures.html"]:after, .FrameItemFont a[href$="MultiValidator.html"]:after, -.indexContainer a[href$="MultiValidator.html"]:after +.indexContainer a[href$="MultiValidator.html"]:after, +.FrameItemFont a[href$="MultiModelPlugin.html"]:after, +.indexContainer a[href$="MultiModelPlugin.html"]:after, +.FrameItemFont a[href$="MultiSpeciesPlugin.html"]:after, +.indexContainer a[href$="MultiSpeciesPlugin.html"]:after, +.FrameItemFont a[href$="MultiSpeciesReferencePlugin.html"]:after, +.indexContainer a[href$="MultiSpeciesReferencePlugin.html"]:after, +.FrameItemFont a[href$="MultiListOfReactionsPlugin.html"]:after, +.indexContainer a[href$="MultiListOfReactionsPlugin.html"]:after, +.FrameItemFont a[href$="MultiSimpleSpeciesReferencePlugin.html"]:after, +.indexContainer a[href$="MultiSimpleSpeciesReferencePlugin.html"]:after, +.FrameItemFont a[href$="MultiSBMLDocumentPlugin.html"]:after, +.indexContainer a[href$="MultiSBMLDocumentPlugin.html"]:after, +.FrameItemFont a[href$="MultiASTPlugin.html"]:after, +.indexContainer a[href$="MultiASTPlugin.html"]:after, +.FrameItemFont a[href$="MultiCompartmentPlugin.html"]:after, +.indexContainer a[href$="MultiCompartmentPlugin.html"]:after, +.FrameItemFont a[href$="MultiExtension.html"]:after, +.indexContainer a[href$="MultiExtension.html"]:after, +.FrameItemFont a[href$="MultiPkgNamespaces.html"]:after, +.indexContainer a[href$="MultiPkgNamespaces.html"]:after { content: "multi"; display: inline-block; @@ -1187,71 +1187,71 @@ p a.el[href="group__render.html"] /* Styling for package 'groups' used in libSBML Javadoc output */ -.FrameItemFont a[href$="GroupsSBMLDocumentPlugin.html"], -.indexContainer a[href$="GroupsSBMLDocumentPlugin.html"], -.FrameItemFont a[href$="GroupsExtension.html"], -.indexContainer a[href$="GroupsExtension.html"], -.FrameItemFont a[href$="GroupsPkgNamespaces.html"], -.indexContainer a[href$="GroupsPkgNamespaces.html"], -.FrameItemFont a[href$="GroupsModelPlugin.html"], -.indexContainer a[href$="GroupsModelPlugin.html"], -.FrameItemFont a[href$="Member.html"], -.indexContainer a[href$="Member.html"], +.FrameItemFont a[href$="ListOfMembers.html"], +.indexContainer a[href$="ListOfMembers.html"], .FrameItemFont a[href$="ListOfGroups.html"], .indexContainer a[href$="ListOfGroups.html"], .FrameItemFont a[href$="Group.html"], .indexContainer a[href$="Group.html"], -.FrameItemFont a[href$="ListOfMembers.html"], -.indexContainer a[href$="ListOfMembers.html"], +.FrameItemFont a[href$="Member.html"], +.indexContainer a[href$="Member.html"], .FrameItemFont a[href$="GroupsValidator.html"], -.indexContainer a[href$="GroupsValidator.html"] +.indexContainer a[href$="GroupsValidator.html"], +.FrameItemFont a[href$="GroupsSBMLDocumentPlugin.html"], +.indexContainer a[href$="GroupsSBMLDocumentPlugin.html"], +.FrameItemFont a[href$="GroupsModelPlugin.html"], +.indexContainer a[href$="GroupsModelPlugin.html"], +.FrameItemFont a[href$="GroupsExtension.html"], +.indexContainer a[href$="GroupsExtension.html"], +.FrameItemFont a[href$="GroupsPkgNamespaces.html"], +.indexContainer a[href$="GroupsPkgNamespaces.html"] { display: inline-block; margin-left: 0px; } -.FrameItemFont a[href$="GroupsSBMLDocumentPlugin.html"]:before, -.indexContainer a[href$="GroupsSBMLDocumentPlugin.html"]:before, -.FrameItemFont a[href$="GroupsExtension.html"]:before, -.indexContainer a[href$="GroupsExtension.html"]:before, -.FrameItemFont a[href$="GroupsPkgNamespaces.html"]:before, -.indexContainer a[href$="GroupsPkgNamespaces.html"]:before, -.FrameItemFont a[href$="GroupsModelPlugin.html"]:before, -.indexContainer a[href$="GroupsModelPlugin.html"]:before, -.FrameItemFont a[href$="Member.html"]:before, -.indexContainer a[href$="Member.html"]:before, +.FrameItemFont a[href$="ListOfMembers.html"]:before, +.indexContainer a[href$="ListOfMembers.html"]:before, .FrameItemFont a[href$="ListOfGroups.html"]:before, .indexContainer a[href$="ListOfGroups.html"]:before, .FrameItemFont a[href$="Group.html"]:before, .indexContainer a[href$="Group.html"]:before, -.FrameItemFont a[href$="ListOfMembers.html"]:before, -.indexContainer a[href$="ListOfMembers.html"]:before, +.FrameItemFont a[href$="Member.html"]:before, +.indexContainer a[href$="Member.html"]:before, .FrameItemFont a[href$="GroupsValidator.html"]:before, -.indexContainer a[href$="GroupsValidator.html"]:before +.indexContainer a[href$="GroupsValidator.html"]:before, +.FrameItemFont a[href$="GroupsSBMLDocumentPlugin.html"]:before, +.indexContainer a[href$="GroupsSBMLDocumentPlugin.html"]:before, +.FrameItemFont a[href$="GroupsModelPlugin.html"]:before, +.indexContainer a[href$="GroupsModelPlugin.html"]:before, +.FrameItemFont a[href$="GroupsExtension.html"]:before, +.indexContainer a[href$="GroupsExtension.html"]:before, +.FrameItemFont a[href$="GroupsPkgNamespaces.html"]:before, +.indexContainer a[href$="GroupsPkgNamespaces.html"]:before { content: "\25cf"; color: rgb(242, 169, 135); margin-right: 0.25em; } -.FrameItemFont a[href$="GroupsSBMLDocumentPlugin.html"]:after, -.indexContainer a[href$="GroupsSBMLDocumentPlugin.html"]:after, -.FrameItemFont a[href$="GroupsExtension.html"]:after, -.indexContainer a[href$="GroupsExtension.html"]:after, -.FrameItemFont a[href$="GroupsPkgNamespaces.html"]:after, -.indexContainer a[href$="GroupsPkgNamespaces.html"]:after, -.FrameItemFont a[href$="GroupsModelPlugin.html"]:after, -.indexContainer a[href$="GroupsModelPlugin.html"]:after, -.FrameItemFont a[href$="Member.html"]:after, -.indexContainer a[href$="Member.html"]:after, +.FrameItemFont a[href$="ListOfMembers.html"]:after, +.indexContainer a[href$="ListOfMembers.html"]:after, .FrameItemFont a[href$="ListOfGroups.html"]:after, .indexContainer a[href$="ListOfGroups.html"]:after, .FrameItemFont a[href$="Group.html"]:after, .indexContainer a[href$="Group.html"]:after, -.FrameItemFont a[href$="ListOfMembers.html"]:after, -.indexContainer a[href$="ListOfMembers.html"]:after, +.FrameItemFont a[href$="Member.html"]:after, +.indexContainer a[href$="Member.html"]:after, .FrameItemFont a[href$="GroupsValidator.html"]:after, -.indexContainer a[href$="GroupsValidator.html"]:after +.indexContainer a[href$="GroupsValidator.html"]:after, +.FrameItemFont a[href$="GroupsSBMLDocumentPlugin.html"]:after, +.indexContainer a[href$="GroupsSBMLDocumentPlugin.html"]:after, +.FrameItemFont a[href$="GroupsModelPlugin.html"]:after, +.indexContainer a[href$="GroupsModelPlugin.html"]:after, +.FrameItemFont a[href$="GroupsExtension.html"]:after, +.indexContainer a[href$="GroupsExtension.html"]:after, +.FrameItemFont a[href$="GroupsPkgNamespaces.html"]:after, +.indexContainer a[href$="GroupsPkgNamespaces.html"]:after { content: "groups"; display: inline-block; @@ -1276,77 +1276,77 @@ p a.el[href="group__render.html"] /* Styling for package 'arrays' used in libSBML Javadoc output */ +.FrameItemFont a[href$="Dimension.html"], +.indexContainer a[href$="Dimension.html"], +.FrameItemFont 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a[href$="GlobalStyle.html"]:after, .indexContainer a[href$="GlobalStyle.html"]:after, +.FrameItemFont a[href$="GraphicalPrimitive2D.html"]:after, +.indexContainer a[href$="GraphicalPrimitive2D.html"]:after, +.FrameItemFont a[href$="Text.html"]:after, +.indexContainer a[href$="Text.html"]:after, +.FrameItemFont a[href$="ListOfDrawables.html"]:after, +.indexContainer a[href$="ListOfDrawables.html"]:after, +.FrameItemFont a[href$="ListOfColorDefinitions.html"]:after, +.indexContainer a[href$="ListOfColorDefinitions.html"]:after, +.FrameItemFont a[href$="RadialGradient.html"]:after, +.indexContainer a[href$="RadialGradient.html"]:after, +.FrameItemFont a[href$="ListOfLineEndings.html"]:after, +.indexContainer a[href$="ListOfLineEndings.html"]:after, +.FrameItemFont a[href$="ListOfGradientStops.html"]:after, +.indexContainer a[href$="ListOfGradientStops.html"]:after, +.FrameItemFont a[href$="RenderLayoutConverter.html"]:after, +.indexContainer a[href$="RenderLayoutConverter.html"]:after, .FrameItemFont a[href$="RenderValidator.html"]:after, -.indexContainer a[href$="RenderValidator.html"]:after +.indexContainer a[href$="RenderValidator.html"]:after, +.FrameItemFont a[href$="RenderSBMLDocumentPlugin.html"]:after, +.indexContainer a[href$="RenderSBMLDocumentPlugin.html"]:after, +.FrameItemFont a[href$="RenderListOfLayoutsPlugin.html"]:after, +.indexContainer a[href$="RenderListOfLayoutsPlugin.html"]:after, +.FrameItemFont a[href$="RenderLayoutPlugin.html"]:after, +.indexContainer a[href$="RenderLayoutPlugin.html"]:after, +.FrameItemFont a[href$="RenderGraphicalObjectPlugin.html"]:after, +.indexContainer a[href$="RenderGraphicalObjectPlugin.html"]:after, +.FrameItemFont a[href$="RenderExtension.html"]:after, +.indexContainer a[href$="RenderExtension.html"]:after, +.FrameItemFont a[href$="RenderPkgNamespaces.html"]:after, +.indexContainer a[href$="RenderPkgNamespaces.html"]:after { content: "render"; display: inline-block; diff --git a/qual_example1_8cpp-example.html b/qual_example1_8cpp-example.html index 701283959..996ab0547 100644 --- a/qual_example1_8cpp-example.html +++ b/qual_example1_8cpp-example.html @@ -307,11 +307,11 @@
SBase::setSBOTerm
virtual int setSBOTerm(int value)
Sets the value of the "sboTerm" attribute.
Definition: SBase.cpp:2515
SBase::getPlugin
SBasePlugin * getPlugin(const std::string &package)
Returns a plug-in object (extension interface) for an SBML Level 3 package extension with the given p...
Definition: SBase.cpp:3530
Transition
Definition: Transition.h:101
-
Transition::createOutput
Output * createOutput()
Creates a new Output object, adds it to this Transition's ListOfOutputs and returns the Output object...
Definition: Transition.cpp:638
+
Transition::createOutput
Output * createOutput()
Creates a new Output object, adds it to this Transition's ListOfOutputs and returns the Output object...
Definition: Transition.cpp:630
Transition::setId
virtual int setId(const std::string &sid)
Sets the value of the "id" attribute of this Transition.
Definition: Transition.cpp:242
-
Transition::createFunctionTerm
FunctionTerm * createFunctionTerm()
Creates a new FunctionTerm object, adds it to this Transition's ListOfFunctionTerms and returns the F...
Definition: Transition.cpp:796
-
Transition::createInput
Input * createInput()
Creates a new Input object, adds it to this Transition's ListOfInputs and returns the Input object cr...
Definition: Transition.cpp:454
-
Transition::createDefaultTerm
DefaultTerm * createDefaultTerm()
Creates a new DefaultTerm object, adds it to this Transition's ListOfFunctionTerms and returns the De...
Definition: Transition.cpp:823
+
Transition::createFunctionTerm
FunctionTerm * createFunctionTerm()
Creates a new FunctionTerm object, adds it to this Transition's ListOfFunctionTerms and returns the F...
Definition: Transition.cpp:784
+
Transition::createInput
Input * createInput()
Creates a new Input object, adds it to this Transition's ListOfInputs and returns the Input object cr...
Definition: Transition.cpp:450
+
Transition::createDefaultTerm
DefaultTerm * createDefaultTerm()
Creates a new DefaultTerm object, adds it to this Transition's ListOfFunctionTerms and returns the De...
Definition: Transition.cpp:811
diff --git a/spec_example1_8cpp-example.html b/spec_example1_8cpp-example.html index 469390de0..3639d48cd 100644 --- a/spec_example1_8cpp-example.html +++ b/spec_example1_8cpp-example.html @@ -273,11 +273,11 @@
SBMLTypes.h
Include all SBML types in a single header file.
writeSBMLToFile
int writeSBMLToFile(const SBMLDocument_t *d, const char *filename)
Writes the given SBML document d to the file filename.
CompModelPlugin
Definition: CompModelPlugin.h:87
-
CompModelPlugin::createSubmodel
Submodel * createSubmodel()
Creates a Submodel object, adds it to the end of the submodel objects list and returns a pointer to t...
Definition: CompModelPlugin.cpp:316
+
CompModelPlugin::createSubmodel
Submodel * createSubmodel()
Creates a Submodel object, adds it to the end of the submodel objects list and returns a pointer to t...
Definition: CompModelPlugin.cpp:312
CompModelPlugin::addSubmodel
int addSubmodel(const Submodel *submodel)
Adds a copy of the given Submodel object to the list of submodels.
Definition: CompModelPlugin.cpp:275
CompSBMLDocumentPlugin
Definition: CompSBMLDocumentPlugin.h:94
-
CompSBMLDocumentPlugin::setRequired
virtual int setRequired(bool value)
Sets the bool value of "required" attribute of corresponding package in SBMLDocument element.
Definition: CompSBMLDocumentPlugin.cpp:608
-
CompSBMLDocumentPlugin::createModelDefinition
ModelDefinition * createModelDefinition()
Creates a ModelDefinition object, adds it to the end of the ModelDefinition objects list and returns ...
Definition: CompSBMLDocumentPlugin.cpp:403
+
CompSBMLDocumentPlugin::setRequired
virtual int setRequired(bool value)
Sets the bool value of "required" attribute of corresponding package in SBMLDocument element.
Definition: CompSBMLDocumentPlugin.cpp:600
+
CompSBMLDocumentPlugin::createModelDefinition
ModelDefinition * createModelDefinition()
Creates a ModelDefinition object, adds it to the end of the ModelDefinition objects list and returns ...
Definition: CompSBMLDocumentPlugin.cpp:399
Compartment
Definition: Compartment.h:490
Compartment::setConstant
int setConstant(bool value)
Sets the value of the "constant" attribute of this Compartment object.
Definition: Compartment.cpp:661
Compartment::setSpatialDimensions
int setSpatialDimensions(unsigned int value)
Sets the "spatialDimensions" attribute of this Compartment object.
Definition: Compartment.cpp:552
diff --git a/spec_example2_8cpp-example.html b/spec_example2_8cpp-example.html index 04e6bfaca..d0f9f81ee 100644 --- a/spec_example2_8cpp-example.html +++ b/spec_example2_8cpp-example.html @@ -264,10 +264,10 @@
SBMLTypes.h
Include all SBML types in a single header file.
writeSBMLToFile
int writeSBMLToFile(const SBMLDocument_t *d, const char *filename)
Writes the given SBML document d to the file filename.
CompModelPlugin
Definition: CompModelPlugin.h:87
-
CompModelPlugin::createSubmodel
Submodel * createSubmodel()
Creates a Submodel object, adds it to the end of the submodel objects list and returns a pointer to t...
Definition: CompModelPlugin.cpp:316
+
CompModelPlugin::createSubmodel
Submodel * createSubmodel()
Creates a Submodel object, adds it to the end of the submodel objects list and returns a pointer to t...
Definition: CompModelPlugin.cpp:312
CompSBMLDocumentPlugin
Definition: CompSBMLDocumentPlugin.h:94
-
CompSBMLDocumentPlugin::createExternalModelDefinition
ExternalModelDefinition * createExternalModelDefinition()
Creates a ExternalModelDefinition object, adds it to the end of the ExternalModelDefinition objects l...
Definition: CompSBMLDocumentPlugin.cpp:544
-
CompSBMLDocumentPlugin::setRequired
virtual int setRequired(bool value)
Sets the bool value of "required" attribute of corresponding package in SBMLDocument element.
Definition: CompSBMLDocumentPlugin.cpp:608
+
CompSBMLDocumentPlugin::createExternalModelDefinition
ExternalModelDefinition * createExternalModelDefinition()
Creates a ExternalModelDefinition object, adds it to the end of the ExternalModelDefinition objects l...
Definition: CompSBMLDocumentPlugin.cpp:536
+
CompSBMLDocumentPlugin::setRequired
virtual int setRequired(bool value)
Sets the bool value of "required" attribute of corresponding package in SBMLDocument element.
Definition: CompSBMLDocumentPlugin.cpp:600
CompSBasePlugin
Definition: CompSBasePlugin.h:85
CompSBasePlugin::addReplacedElement
int addReplacedElement(const ReplacedElement *replacedElement)
Adds a copy of the given ReplacedElement object to the list of ReplacedElements.
Definition: CompSBasePlugin.cpp:325
Compartment
Definition: Compartment.h:490
diff --git a/spec_example3_8cpp-example.html b/spec_example3_8cpp-example.html index e687d9364..eee02fb61 100644 --- a/spec_example3_8cpp-example.html +++ b/spec_example3_8cpp-example.html @@ -327,17 +327,17 @@
SBMLTypes.h
Include all SBML types in a single header file.
writeSBMLToFile
int writeSBMLToFile(const SBMLDocument_t *d, const char *filename)
Writes the given SBML document d to the file filename.
CompModelPlugin
Definition: CompModelPlugin.h:87
-
CompModelPlugin::createPort
Port * createPort()
Creates a Port object, adds it to the end of the port objects list and returns a pointer to the newly...
Definition: CompModelPlugin.cpp:457
-
CompModelPlugin::createSubmodel
Submodel * createSubmodel()
Creates a Submodel object, adds it to the end of the submodel objects list and returns a pointer to t...
Definition: CompModelPlugin.cpp:316
-
CompModelPlugin::addPort
int addPort(const Port *port)
Adds a copy of the given Port object to the list of ports.
Definition: CompModelPlugin.cpp:416
+
CompModelPlugin::createPort
Port * createPort()
Creates a Port object, adds it to the end of the port objects list and returns a pointer to the newly...
Definition: CompModelPlugin.cpp:449
+
CompModelPlugin::createSubmodel
Submodel * createSubmodel()
Creates a Submodel object, adds it to the end of the submodel objects list and returns a pointer to t...
Definition: CompModelPlugin.cpp:312
+
CompModelPlugin::addPort
int addPort(const Port *port)
Adds a copy of the given Port object to the list of ports.
Definition: CompModelPlugin.cpp:412
CompSBMLDocumentPlugin
Definition: CompSBMLDocumentPlugin.h:94
-
CompSBMLDocumentPlugin::createExternalModelDefinition
ExternalModelDefinition * createExternalModelDefinition()
Creates a ExternalModelDefinition object, adds it to the end of the ExternalModelDefinition objects l...
Definition: CompSBMLDocumentPlugin.cpp:544
-
CompSBMLDocumentPlugin::setRequired
virtual int setRequired(bool value)
Sets the bool value of "required" attribute of corresponding package in SBMLDocument element.
Definition: CompSBMLDocumentPlugin.cpp:608
-
CompSBMLDocumentPlugin::createModelDefinition
ModelDefinition * createModelDefinition()
Creates a ModelDefinition object, adds it to the end of the ModelDefinition objects list and returns ...
Definition: CompSBMLDocumentPlugin.cpp:403
+
CompSBMLDocumentPlugin::createExternalModelDefinition
ExternalModelDefinition * createExternalModelDefinition()
Creates a ExternalModelDefinition object, adds it to the end of the ExternalModelDefinition objects l...
Definition: CompSBMLDocumentPlugin.cpp:536
+
CompSBMLDocumentPlugin::setRequired
virtual int setRequired(bool value)
Sets the bool value of "required" attribute of corresponding package in SBMLDocument element.
Definition: CompSBMLDocumentPlugin.cpp:600
+
CompSBMLDocumentPlugin::createModelDefinition
ModelDefinition * createModelDefinition()
Creates a ModelDefinition object, adds it to the end of the ModelDefinition objects list and returns ...
Definition: CompSBMLDocumentPlugin.cpp:399
CompSBasePlugin
Definition: CompSBasePlugin.h:85
CompSBasePlugin::addReplacedElement
int addReplacedElement(const ReplacedElement *replacedElement)
Adds a copy of the given ReplacedElement object to the list of ReplacedElements.
Definition: CompSBasePlugin.cpp:325
-
CompSBasePlugin::createReplacedElement
ReplacedElement * createReplacedElement()
Creates a ReplacedElement object, adds it to the end of the ReplacedElement objects list and returns ...
Definition: CompSBasePlugin.cpp:375
-
CompSBasePlugin::createReplacedBy
ReplacedBy * createReplacedBy()
Creates a new, empty ReplacedBy, adds it to this CompSBasePlugin and returns the created ReplacedBy.
Definition: CompSBasePlugin.cpp:447
+
CompSBasePlugin::createReplacedElement
ReplacedElement * createReplacedElement()
Creates a ReplacedElement object, adds it to the end of the ReplacedElement objects list and returns ...
Definition: CompSBasePlugin.cpp:371
+
CompSBasePlugin::createReplacedBy
ReplacedBy * createReplacedBy()
Creates a new, empty ReplacedBy, adds it to this CompSBasePlugin and returns the created ReplacedBy.
Definition: CompSBasePlugin.cpp:439
Compartment
Definition: Compartment.h:490
Compartment::setConstant
int setConstant(bool value)
Sets the value of the "constant" attribute of this Compartment object.
Definition: Compartment.cpp:661
Compartment::setSpatialDimensions
int setSpatialDimensions(unsigned int value)
Sets the "spatialDimensions" attribute of this Compartment object.
Definition: Compartment.cpp:552
@@ -393,7 +393,7 @@
Submodel
Definition: Submodel.h:156
Submodel::setId
virtual int setId(const std::string &sid)
Sets the value of the "id" attribute of this Submodel.
Definition: Submodel.cpp:178
Submodel::setModelRef
virtual int setModelRef(const std::string &modelRef)
Sets the value of the "modelRef" attribute of this Submodel.
Definition: Submodel.cpp:254
-
Submodel::createDeletion
Deletion * createDeletion()
Creates a Deletion object, adds it to the end of the deletion objects list and returns a pointer to t...
Definition: Submodel.cpp:500
+
Submodel::createDeletion
Deletion * createDeletion()
Creates a Deletion object, adds it to the end of the deletion objects list and returns a pointer to t...
Definition: Submodel.cpp:496
diff --git a/spec_example4_8cpp-example.html b/spec_example4_8cpp-example.html index 85342b154..b708471ee 100644 --- a/spec_example4_8cpp-example.html +++ b/spec_example4_8cpp-example.html @@ -422,16 +422,16 @@
SBMLTypes.h
Include all SBML types in a single header file.
writeSBMLToFile
int writeSBMLToFile(const SBMLDocument_t *d, const char *filename)
Writes the given SBML document d to the file filename.
CompModelPlugin
Definition: CompModelPlugin.h:87
-
CompModelPlugin::createPort
Port * createPort()
Creates a Port object, adds it to the end of the port objects list and returns a pointer to the newly...
Definition: CompModelPlugin.cpp:457
-
CompModelPlugin::createSubmodel
Submodel * createSubmodel()
Creates a Submodel object, adds it to the end of the submodel objects list and returns a pointer to t...
Definition: CompModelPlugin.cpp:316
-
CompModelPlugin::addPort
int addPort(const Port *port)
Adds a copy of the given Port object to the list of ports.
Definition: CompModelPlugin.cpp:416
+
CompModelPlugin::createPort
Port * createPort()
Creates a Port object, adds it to the end of the port objects list and returns a pointer to the newly...
Definition: CompModelPlugin.cpp:449
+
CompModelPlugin::createSubmodel
Submodel * createSubmodel()
Creates a Submodel object, adds it to the end of the submodel objects list and returns a pointer to t...
Definition: CompModelPlugin.cpp:312
+
CompModelPlugin::addPort
int addPort(const Port *port)
Adds a copy of the given Port object to the list of ports.
Definition: CompModelPlugin.cpp:412
CompSBMLDocumentPlugin
Definition: CompSBMLDocumentPlugin.h:94
-
CompSBMLDocumentPlugin::setRequired
virtual int setRequired(bool value)
Sets the bool value of "required" attribute of corresponding package in SBMLDocument element.
Definition: CompSBMLDocumentPlugin.cpp:608
-
CompSBMLDocumentPlugin::createModelDefinition
ModelDefinition * createModelDefinition()
Creates a ModelDefinition object, adds it to the end of the ModelDefinition objects list and returns ...
Definition: CompSBMLDocumentPlugin.cpp:403
+
CompSBMLDocumentPlugin::setRequired
virtual int setRequired(bool value)
Sets the bool value of "required" attribute of corresponding package in SBMLDocument element.
Definition: CompSBMLDocumentPlugin.cpp:600
+
CompSBMLDocumentPlugin::createModelDefinition
ModelDefinition * createModelDefinition()
Creates a ModelDefinition object, adds it to the end of the ModelDefinition objects list and returns ...
Definition: CompSBMLDocumentPlugin.cpp:399
CompSBasePlugin
Definition: CompSBasePlugin.h:85
CompSBasePlugin::addReplacedElement
int addReplacedElement(const ReplacedElement *replacedElement)
Adds a copy of the given ReplacedElement object to the list of ReplacedElements.
Definition: CompSBasePlugin.cpp:325
-
CompSBasePlugin::createReplacedElement
ReplacedElement * createReplacedElement()
Creates a ReplacedElement object, adds it to the end of the ReplacedElement objects list and returns ...
Definition: CompSBasePlugin.cpp:375
-
CompSBasePlugin::createReplacedBy
ReplacedBy * createReplacedBy()
Creates a new, empty ReplacedBy, adds it to this CompSBasePlugin and returns the created ReplacedBy.
Definition: CompSBasePlugin.cpp:447
+
CompSBasePlugin::createReplacedElement
ReplacedElement * createReplacedElement()
Creates a ReplacedElement object, adds it to the end of the ReplacedElement objects list and returns ...
Definition: CompSBasePlugin.cpp:371
+
CompSBasePlugin::createReplacedBy
ReplacedBy * createReplacedBy()
Creates a new, empty ReplacedBy, adds it to this CompSBasePlugin and returns the created ReplacedBy.
Definition: CompSBasePlugin.cpp:439
Compartment
Definition: Compartment.h:490
Compartment::setConstant
int setConstant(bool value)
Sets the value of the "constant" attribute of this Compartment object.
Definition: Compartment.cpp:661
Compartment::setSpatialDimensions
int setSpatialDimensions(unsigned int value)
Sets the "spatialDimensions" attribute of this Compartment object.
Definition: Compartment.cpp:552
@@ -487,7 +487,7 @@
Submodel
Definition: Submodel.h:156
Submodel::setId
virtual int setId(const std::string &sid)
Sets the value of the "id" attribute of this Submodel.
Definition: Submodel.cpp:178
Submodel::setModelRef
virtual int setModelRef(const std::string &modelRef)
Sets the value of the "modelRef" attribute of this Submodel.
Definition: Submodel.cpp:254
-
Submodel::createDeletion
Deletion * createDeletion()
Creates a Deletion object, adds it to the end of the deletion objects list and returns a pointer to t...
Definition: Submodel.cpp:500
+
Submodel::createDeletion
Deletion * createDeletion()
Creates a Deletion object, adds it to the end of the deletion objects list and returns a pointer to t...
Definition: Submodel.cpp:496